RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 IRX5P78411 483 aaPredicted RBP6.35□□□□□ -1.39
NPHP3-206ENST00000474871 TDRD9Q8NDG6 1382 aaKnown RBP6.35□□□□□ -1.39
NPHP3-206ENST00000474871 TCERG1O14776 1098 aaKnown RBP6.35□□□□□ -1.39
NPHP3-206ENST00000474871 CT47A1Q5JQC4 288 aaPredicted RBP6.35□□□□□ -1.39
NPHP3-206ENST00000474871 ADAMTS12P58397 1594 aa6.35□□□□□ -1.39
NPHP3-206ENST00000474871 IFT140Q96RY7 1462 aa6.35□□□□□ -1.39
NPHP3-206ENST00000474871 ARID3CA6NKF2 412 aa6.35□□□□□ -1.39
NPHP3-206ENST00000474871 PPFIA4O75335 1185 aa6.35□□□□□ -1.39
NPHP3-206ENST00000474871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.35□□□□□ -1.39
NPHP3-206ENST00000474871 ZNF316A6NFI3 1004 aaPredicted RBP6.34□□□□□ -1.39
NPHP3-206ENST00000474871 PTMSP20962 102 aa6.34□□□□□ -1.39
NPHP3-206ENST00000474871 SSFA2P28290 1259 aa6.34□□□□□ -1.39
NPHP3-206ENST00000474871 FAM163AQ96GL9 167 aaPredicted RBP6.34□□□□□ -1.39
NPHP3-206ENST00000474871 EFCAB5A4FU69 1503 aa6.34□□□□□ -1.4
NPHP3-206ENST00000474871 EIF4G3O43432 1585 aaKnown RBP6.33□□□□□ -1.4
NPHP3-206ENST00000474871 RAI14Q9P0K7 980 aa6.33□□□□□ -1.4
NPHP3-206ENST00000474871 RHBDL3P58872 404 aa6.33□□□□□ -1.4
NPHP3-206ENST00000474871 CCDC189A1A4V9 331 aa6.32□□□□□ -1.4
NPHP3-206ENST00000474871 E9PSI1 815 aa6.32□□□□□ -1.4
NPHP3-206ENST00000474871 RALBP1Q15311 655 aa6.32□□□□□ -1.4
NPHP3-206ENST00000474871 SAMD9Q5K651 1589 aa6.32□□□□□ -1.4
NPHP3-206ENST00000474871 COQ9O75208 318 aa6.32□□□□□ -1.4
NPHP3-206ENST00000474871 CLCN1P35523 988 aa6.32□□□□□ -1.4
NPHP3-206ENST00000474871 TERF2IPQ9NYB0 399 aa6.32□□□□□ -1.4
NPHP3-206ENST00000474871 MTA3Q9BTC8 594 aa6.32□□□□□ -1.4
NPHP3-206ENST00000474871 AQRO60306 1485 aaKnown RBP eCLIP6.31□□□□□ -1.4
NPHP3-206ENST00000474871 RIPK4P57078 832 aa6.31□□□□□ -1.4
NPHP3-206ENST00000474871 UVSSAQ2YD98 709 aa6.31□□□□□ -1.4
NPHP3-206ENST00000474871 CFAP43Q8NDM7 1665 aa6.31□□□□□ -1.4
NPHP3-206ENST00000474871 ZNF608Q9ULD9 1512 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-206ENST00000474871 GRIN2BQ13224 1484 aa6.31□□□□□ -1.4
NPHP3-206ENST00000474871 PCF11O94913 1555 aaKnown RBP6.31□□□□□ -1.4
NPHP3-206ENST00000474871 GAS2L2Q8NHY3 880 aa6.31□□□□□ -1.4
NPHP3-206ENST00000474871 CT47B1P0C2W7 299 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-206ENST00000474871 BSDC1Q9NW68 430 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-206ENST00000474871 TULP2O00295 520 aa6.3□□□□□ -1.4
NPHP3-206ENST00000474871 MAP2K1Q02750 393 aaPredicted RBP6.3□□□□□ -1.4
NPHP3-206ENST00000474871 CACTIN-AS1Q8N1I8 211 aa6.3□□□□□ -1.4
NPHP3-206ENST00000474871 ZBTB9Q96C00 473 aa6.3□□□□□ -1.4
NPHP3-206ENST00000474871 FHAD1B1AJZ9 1412 aa6.3□□□□□ -1.4
NPHP3-206ENST00000474871 HSP90AB3PQ58FF7 597 aa6.3□□□□□ -1.4
NPHP3-206ENST00000474871 ARID4AP29374 1257 aaPredicted RBP6.3□□□□□ -1.4
NPHP3-206ENST00000474871 TIAM1Q13009 1591 aa6.3□□□□□ -1.4
NPHP3-206ENST00000474871 MAP3K1Q13233 1512 aa6.3□□□□□ -1.4
NPHP3-206ENST00000474871 ZKSCAN8Q15776 578 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-206ENST00000474871 CADPS2Q86UW7 1296 aa6.29□□□□□ -1.4
NPHP3-206ENST00000474871 ATL2Q8NHH9 583 aa6.29□□□□□ -1.4
NPHP3-206ENST00000474871 FOXD4Q12950 439 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-206ENST00000474871 UNCXA6NJT0 531 aa6.29□□□□□ -1.4
NPHP3-206ENST00000474871 APBB1IPQ7Z5R6 666 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-206ENST00000474871 TRIM44Q96DX7 344 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-206ENST00000474871 GOLGA6CA6NDK9 693 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 GOLGA6BA6NDN3 693 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 GOLGA6DP0CG33 693 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 GOLGA6AQ9NYA3 693 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 KIF20AO95235 890 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 C11orf91Q3C1V1 193 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 ZNF513Q8N8E2 541 aaPredicted RBP6.28□□□□□ -1.4
NPHP3-206ENST00000474871 ZNF219Q9P2Y4 722 aaPredicted RBP6.28□□□□□ -1.4
NPHP3-206ENST00000474871 CLEC4GQ6UXB4 293 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 STK24Q9Y6E0 443 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 SNAPC4Q5SXM2 1469 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 FYCO1Q9BQS8 1478 aa6.28□□□□□ -1.4
NPHP3-206ENST00000474871 GSE1Q14687 1217 aa6.27□□□□□ -1.41
NPHP3-206ENST00000474871 FHOD3Q2V2M9 1422 aa6.27□□□□□ -1.41
NPHP3-206ENST00000474871 IQGAP2Q13576 1575 aa6.27□□□□□ -1.41
NPHP3-206ENST00000474871 SATB1Q01826 763 aa6.27□□□□□ -1.41
NPHP3-206ENST00000474871 RTL5Q5HYW3 569 aaPredicted RBP6.27□□□□□ -1.41
NPHP3-206ENST00000474871 SKILP12757 684 aa6.27□□□□□ -1.41
NPHP3-206ENST00000474871 ARMCX6Q7L4S7 300 aa6.27□□□□□ -1.41
NPHP3-206ENST00000474871 LRRIQ1Q96JM4 1722 aa6.27□□□□□ -1.41
NPHP3-206ENST00000474871 MFAP1P55081 439 aaKnown RBP6.26□□□□□ -1.41
NPHP3-206ENST00000474871 CCT2P78371 535 aaKnown RBP6.26□□□□□ -1.41
NPHP3-206ENST00000474871 PKD2Q13563 968 aa6.26□□□□□ -1.41
NPHP3-206ENST00000474871 CASKIN1Q8WXD9 1431 aa6.26□□□□□ -1.41
NPHP3-206ENST00000474871 CC2D1BQ5T0F9 858 aaKnown RBP6.26□□□□□ -1.41
NPHP3-206ENST00000474871 FRAT1Q92837 279 aaPredicted RBP6.26□□□□□ -1.41
NPHP3-206ENST00000474871 ITFG2Q969R8 447 aa6.26□□□□□ -1.41
NPHP3-206ENST00000474871 TRAIPQ9BWF2 469 aa6.26□□□□□ -1.41
NPHP3-206ENST00000474871 TDO2P48775 406 aa6.26□□□□□ -1.41
NPHP3-206ENST00000474871 NBPF6Q5VWK0 638 aa6.26□□□□□ -1.41
NPHP3-206ENST00000474871 NBPF5PQ86XG9 351 aaPredicted RBP6.26□□□□□ -1.41
NPHP3-206ENST00000474871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.26□□□□□ -1.41
NPHP3-206ENST00000474871 NBPF4Q96M43 638 aa6.26□□□□□ -1.41
NPHP3-206ENST00000474871 PPME1Q9Y570 386 aa6.26□□□□□ -1.41
NPHP3-206ENST00000474871 MAGI1Q96QZ7 1491 aaPredicted RBP6.26□□□□□ -1.41
NPHP3-206ENST00000474871 KANK4Q5T7N3 995 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-206ENST00000474871 IGHDP01880 384 aa6.25□□□□□ -1.41
NPHP3-206ENST00000474871 ESF1Q9H501 851 aaKnown RBP6.25□□□□□ -1.41
NPHP3-206ENST00000474871 RPGRIP1LQ68CZ1 1315 aa6.25□□□□□ -1.41
NPHP3-206ENST00000474871 ERBB3P21860 1342 aa6.25□□□□□ -1.41
NPHP3-206ENST00000474871 GRIN2AQ12879 1464 aa6.25□□□□□ -1.41
NPHP3-206ENST00000474871 KCNV2Q8TDN2 545 aa6.25□□□□□ -1.41
NPHP3-206ENST00000474871 PHF8Q9UPP1 1060 aa6.25□□□□□ -1.41
NPHP3-206ENST00000474871 LRRC9Q6ZRR7 1453 aa6.25□□□□□ -1.41
NPHP3-206ENST00000474871 FMN1Q68DA7 1419 aa6.25□□□□□ -1.41
NPHP3-206ENST00000474871 SETDB1Q15047 1291 aa6.25□□□□□ -1.41
NPHP3-206ENST00000474871 ANP32BQ92688 251 aaKnown RBP6.25□□□□□ -1.41
NPHP3-206ENST00000474871 UGGT2Q9NYU1 1516 aa6.24□□□□□ -1.41
NPHP3-206ENST00000474871 RRBP1Q9P2E9 1410 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms