RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 LRP6O75581 1613 aa23.32■■□□□ 1.32
PCCB-212ENST00000474833 CHD2O14647 1828 aaKnown RBP23.31■■□□□ 1.32
PCCB-212ENST00000474833 FGD6Q6ZV73 1430 aa23.31■■□□□ 1.32
PCCB-212ENST00000474833 SLAIN2Q9P270 581 aa23.3■■□□□ 1.32
PCCB-212ENST00000474833 MYO5BQ9ULV0 1848 aa23.29■■□□□ 1.32
PCCB-212ENST00000474833 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
PCCB-212ENST00000474833 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.32
PCCB-212ENST00000474833 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
PCCB-212ENST00000474833 GCC2Q8IWJ2 1684 aa23.26■■□□□ 1.31
PCCB-212ENST00000474833 ADGRL2O95490 1459 aa23.26■■□□□ 1.31
PCCB-212ENST00000474833 RPRD2Q5VT52 1461 aaKnown RBP23.26■■□□□ 1.31
PCCB-212ENST00000474833 SLC52A1Q9NWF4 448 aa23.25■■□□□ 1.31
PCCB-212ENST00000474833 LOC105371045A0A1W2PR82 267 aa23.24■■□□□ 1.31
PCCB-212ENST00000474833 AHDC1Q5TGY3 1603 aaPredicted RBP23.23■■□□□ 1.31
PCCB-212ENST00000474833 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
PCCB-212ENST00000474833 RIMS2Q9UQ26 1411 aa23.23■■□□□ 1.31
PCCB-212ENST00000474833 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
PCCB-212ENST00000474833 NCOA3Q9Y6Q9 1424 aa23.21■■□□□ 1.31
PCCB-212ENST00000474833 SRCAPQ6ZRS2 3230 aa23.2■■□□□ 1.3
PCCB-212ENST00000474833 ADAMTS13Q76LX8 1427 aa23.2■■□□□ 1.3
PCCB-212ENST00000474833 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.19■■□□□ 1.3
PCCB-212ENST00000474833 DIP2AQ14689 1571 aa23.18■■□□□ 1.3
PCCB-212ENST00000474833 SPATA31A6Q5VVP1 1343 aa23.18■■□□□ 1.3
PCCB-212ENST00000474833 BCANQ96GW7 911 aa23.17■■□□□ 1.3
PCCB-212ENST00000474833 UPF1Q92900 1129 aaKnown RBP eCLIP23.16■■□□□ 1.3
PCCB-212ENST00000474833 TBX22Q9Y458 520 aa23.15■■□□□ 1.3
PCCB-212ENST00000474833 ANKRD50Q9ULJ7 1429 aa23.15■■□□□ 1.3
PCCB-212ENST00000474833 UNC13BO14795 1591 aa23.13■■□□□ 1.29
PCCB-212ENST00000474833 PPP1R15AO75807 674 aaPredicted RBP23.12■■□□□ 1.29
PCCB-212ENST00000474833 E9PCH4 1651 aa23.11■■□□□ 1.29
PCCB-212ENST00000474833 ZNF772Q68DY9 489 aaPredicted RBP23.1■■□□□ 1.29
PCCB-212ENST00000474833 PIK3R4Q99570 1358 aa23.1■■□□□ 1.29
PCCB-212ENST00000474833 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
PCCB-212ENST00000474833 PTPRUQ92729 1446 aa23.08■■□□□ 1.29
PCCB-212ENST00000474833 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.29
PCCB-212ENST00000474833 C19orf44Q9H6X5 657 aa23.08■■□□□ 1.29
PCCB-212ENST00000474833 CDK12Q9NYV4 1490 aaPredicted RBP23.08■■□□□ 1.29
PCCB-212ENST00000474833 MEX3CQ5U5Q3 659 aaKnown RBP23.07■■□□□ 1.28
PCCB-212ENST00000474833 XRN1Q8IZH2 1706 aaKnown RBP23.06■■□□□ 1.28
PCCB-212ENST00000474833 BRINP3Q76B58 766 aa23.06■■□□□ 1.28
PCCB-212ENST00000474833 TRPM2O94759 1503 aa23.06■■□□□ 1.28
PCCB-212ENST00000474833 ASXL1Q8IXJ9 1541 aa23.06■■□□□ 1.28
PCCB-212ENST00000474833 NRXN3Q9Y4C0 1643 aa23.05■■□□□ 1.28
PCCB-212ENST00000474833 C14orf37Q86TY3 774 aa23.05■■□□□ 1.28
PCCB-212ENST00000474833 NHSL1Q5SYE7 1610 aa23.04■■□□□ 1.28
PCCB-212ENST00000474833 HDGFP51858 240 aaKnown RBP23.04■■□□□ 1.28
PCCB-212ENST00000474833 NUTM2DQ5VT03 806 aaPredicted RBP23.04■■□□□ 1.28
PCCB-212ENST00000474833 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.04■■□□□ 1.28
PCCB-212ENST00000474833 DCCP43146 1447 aa23.04■■□□□ 1.28
PCCB-212ENST00000474833 ATF3P18847 181 aa23.03■■□□□ 1.28
PCCB-212ENST00000474833 IQGAP3Q86VI3 1631 aa23.03■■□□□ 1.28
PCCB-212ENST00000474833 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.28
PCCB-212ENST00000474833 MST1RQ04912 1400 aa23■■□□□ 1.27
PCCB-212ENST00000474833 RXRBP28702 533 aa23■■□□□ 1.27
PCCB-212ENST00000474833 APLP2Q06481 763 aa23■■□□□ 1.27
PCCB-212ENST00000474833 SETBP1Q9Y6X0 1596 aa22.99■■□□□ 1.27
PCCB-212ENST00000474833 AMOTL2Q9Y2J4 779 aa22.98■■□□□ 1.27
PCCB-212ENST00000474833 RGS12O14924 1447 aa22.98■■□□□ 1.27
PCCB-212ENST00000474833 CHGAP10645 457 aaKnown RBP22.97■■□□□ 1.27
PCCB-212ENST00000474833 AFF2P51816 1311 aa22.97■■□□□ 1.27
PCCB-212ENST00000474833 NUTM2BA6NNL0 878 aaPredicted RBP22.96■■□□□ 1.27
PCCB-212ENST00000474833 NUTM2EB1AL46 878 aaPredicted RBP22.96■■□□□ 1.27
PCCB-212ENST00000474833 FAM50AQ14320 339 aaKnown RBP22.96■■□□□ 1.27
PCCB-212ENST00000474833 NUTM2AQ8IVF1 878 aaPredicted RBP22.96■■□□□ 1.27
PCCB-212ENST00000474833 PNPLA6Q8IY17 1366 aa22.92■■□□□ 1.26
PCCB-212ENST00000474833 NALCNQ8IZF0 1738 aa22.92■■□□□ 1.26
PCCB-212ENST00000474833 EP400Q96L91 3159 aa22.91■■□□□ 1.26
PCCB-212ENST00000474833 METP08581 1390 aa22.9■■□□□ 1.26
PCCB-212ENST00000474833 ROCK1Q13464 1354 aa22.9■■□□□ 1.26
PCCB-212ENST00000474833 ADGRL3Q9HAR2 1447 aa22.9■■□□□ 1.26
PCCB-212ENST00000474833 LAMC1P11047 1609 aa22.89■■□□□ 1.25
PCCB-212ENST00000474833 DDX17Q92841 729 aaKnown RBP22.88■■□□□ 1.25
PCCB-212ENST00000474833 SPHKAPQ2M3C7 1700 aa22.86■■□□□ 1.25
PCCB-212ENST00000474833 LRRC59Q96AG4 307 aaKnown RBP22.85■■□□□ 1.25
PCCB-212ENST00000474833 C8orf37Q96NL8 207 aa22.85■■□□□ 1.25
PCCB-212ENST00000474833 RBM6P78332 1123 aaKnown RBP22.84■■□□□ 1.25
PCCB-212ENST00000474833 NUP155O75694 1391 aa22.84■■□□□ 1.25
PCCB-212ENST00000474833 NEXMIFQ5QGS0 1516 aa22.83■■□□□ 1.25
PCCB-212ENST00000474833 QTRT2Q9H974 415 aaKnown RBP22.83■■□□□ 1.25
PCCB-212ENST00000474833 C1orf167Q5SNV9 1468 aa22.8■■□□□ 1.24
PCCB-212ENST00000474833 CLTCL1P53675 1640 aa22.79■■□□□ 1.24
PCCB-212ENST00000474833 PTCH1Q13635 1447 aa22.75■■□□□ 1.23
PCCB-212ENST00000474833 COL22A1Q8NFW1 1626 aaPredicted RBP22.75■■□□□ 1.23
PCCB-212ENST00000474833 ADAMTS2O95450 1211 aa22.74■■□□□ 1.23
PCCB-212ENST00000474833 SOS2Q07890 1332 aaPredicted RBP22.74■■□□□ 1.23
PCCB-212ENST00000474833 ATAD2Q6PL18 1390 aa22.74■■□□□ 1.23
PCCB-212ENST00000474833 PRAG1Q86YV5 1406 aa22.74■■□□□ 1.23
PCCB-212ENST00000474833 NGLY1Q96IV0 654 aa22.72■■□□□ 1.23
PCCB-212ENST00000474833 ZNF326Q5BKZ1 582 aaKnown RBP22.71■■□□□ 1.23
PCCB-212ENST00000474833 ROBO2Q9HCK4 1378 aa22.71■■□□□ 1.23
PCCB-212ENST00000474833 ATRNO75882 1429 aa22.71■■□□□ 1.23
PCCB-212ENST00000474833 MYOM2P54296 1465 aa22.69■■□□□ 1.22
PCCB-212ENST00000474833 FNBP4Q8N3X1 1017 aaPredicted RBP22.69■■□□□ 1.22
PCCB-212ENST00000474833 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
PCCB-212ENST00000474833 USP21Q9UK80 565 aa22.68■■□□□ 1.22
PCCB-212ENST00000474833 TRPC5Q9UL62 973 aaPredicted RBP22.66■■□□□ 1.22
PCCB-212ENST00000474833 BCL9LQ86UU0 1499 aa22.65■■□□□ 1.22
PCCB-212ENST00000474833 KIF1BO60333 1816 aa22.64■■□□□ 1.22
PCCB-212ENST00000474833 PXDNQ92626 1479 aa22.64■■□□□ 1.21
PCCB-212ENST00000474833 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms