RNA–Protein interactions for RNA: ENST00000474420.1

SEMA4C-205, Transcript of semaphorin 4C, humanhuman

TSL 2

Gene SEMA4C, Length 2,625 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4C-205ENST00000474420 ARHGEF5Q12774 1597 aa24.62■■□□□ 1.53
SEMA4C-205ENST00000474420 USP19O94966 1318 aa24.62■■□□□ 1.53
SEMA4C-205ENST00000474420 POGKQ9P215 609 aa24.61■■□□□ 1.53
SEMA4C-205ENST00000474420 LAMC1P11047 1609 aa24.59■■□□□ 1.53
SEMA4C-205ENST00000474420 SLKQ9H2G2 1235 aaPredicted RBP24.59■■□□□ 1.53
SEMA4C-205ENST00000474420 TRMT2AQ8IZ69 625 aaKnown RBP24.56■■□□□ 1.52
SEMA4C-205ENST00000474420 SYNJ2O15056 1496 aa24.56■■□□□ 1.52
SEMA4C-205ENST00000474420 SYCP2Q9BX26 1530 aa24.56■■□□□ 1.52
SEMA4C-205ENST00000474420 CDC42BPBQ9Y5S2 1711 aa24.56■■□□□ 1.52
SEMA4C-205ENST00000474420 PANK1Q8TE04 598 aa24.54■■□□□ 1.52
SEMA4C-205ENST00000474420 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
SEMA4C-205ENST00000474420 COG6Q9Y2V7 657 aa24.53■■□□□ 1.52
SEMA4C-205ENST00000474420 EIF2AK4Q9P2K8 1649 aaKnown RBP24.53■■□□□ 1.52
SEMA4C-205ENST00000474420 NKTRP30414 1462 aaKnown RBP24.53■■□□□ 1.52
SEMA4C-205ENST00000474420 ARXQ96QS3 562 aa24.51■■□□□ 1.51
SEMA4C-205ENST00000474420 UNC13BO14795 1591 aa24.51■■□□□ 1.51
SEMA4C-205ENST00000474420 NUP160Q12769 1436 aa24.49■■□□□ 1.51
SEMA4C-205ENST00000474420 CANXP27824 592 aaKnown RBP24.47■■□□□ 1.51
SEMA4C-205ENST00000474420 ASXL1Q8IXJ9 1541 aa24.47■■□□□ 1.51
SEMA4C-205ENST00000474420 RNF17Q9BXT8 1623 aaKnown RBP24.47■■□□□ 1.51
SEMA4C-205ENST00000474420 PREX2Q70Z35 1606 aa24.46■■□□□ 1.51
SEMA4C-205ENST00000474420 FAM43AQ8N2R8 423 aa24.46■■□□□ 1.51
SEMA4C-205ENST00000474420 E9PSI1 815 aa24.46■■□□□ 1.51
SEMA4C-205ENST00000474420 RSPH4AQ5TD94 716 aa24.46■■□□□ 1.51
SEMA4C-205ENST00000474420 CLUAP1Q96AJ1 413 aa24.46■■□□□ 1.51
SEMA4C-205ENST00000474420 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.51
SEMA4C-205ENST00000474420 PIK3C2GO75747 1445 aa24.45■■□□□ 1.51
SEMA4C-205ENST00000474420 TNNQ9UQP3 1299 aa24.45■■□□□ 1.5
SEMA4C-205ENST00000474420 IQGAP3Q86VI3 1631 aa24.44■■□□□ 1.5
SEMA4C-205ENST00000474420 ARHGAP5Q13017 1502 aa24.44■■□□□ 1.5
SEMA4C-205ENST00000474420 NEUROD2Q15784 382 aa24.44■■□□□ 1.5
SEMA4C-205ENST00000474420 SPRYD3Q8NCJ5 442 aa24.43■■□□□ 1.5
SEMA4C-205ENST00000474420 CENPJQ9HC77 1338 aaPredicted RBP24.42■■□□□ 1.5
SEMA4C-205ENST00000474420 VIRMAQ69YN4 1812 aaKnown RBP24.42■■□□□ 1.5
SEMA4C-205ENST00000474420 RRAGDQ9NQL2 400 aaPredicted RBP24.41■■□□□ 1.5
SEMA4C-205ENST00000474420 RRP7AQ9Y3A4 280 aaKnown RBP24.41■■□□□ 1.5
SEMA4C-205ENST00000474420 NLRP1Q9C000 1473 aa24.41■■□□□ 1.5
SEMA4C-205ENST00000474420 CGNL1Q0VF96 1302 aa24.4■■□□□ 1.5
SEMA4C-205ENST00000474420 SYNMO15061 1565 aa24.4■■□□□ 1.5
SEMA4C-205ENST00000474420 BCL2L13Q9BXK5 485 aa24.4■■□□□ 1.5
SEMA4C-205ENST00000474420 TTC37Q6PGP7 1564 aa24.39■■□□□ 1.5
SEMA4C-205ENST00000474420 BECN1Q14457 450 aa24.39■■□□□ 1.5
SEMA4C-205ENST00000474420 MADDQ8WXG6 1647 aa24.39■■□□□ 1.5
SEMA4C-205ENST00000474420 UBE2Q2Q8WVN8 375 aa24.39■■□□□ 1.49
SEMA4C-205ENST00000474420 IQGAP1P46940 1657 aa24.39■■□□□ 1.49
SEMA4C-205ENST00000474420 CDCA8Q53HL2 280 aa24.38■■□□□ 1.49
SEMA4C-205ENST00000474420 ABCC2Q92887 1545 aa24.38■■□□□ 1.49
SEMA4C-205ENST00000474420 MYOM1P52179 1685 aa24.38■■□□□ 1.49
SEMA4C-205ENST00000474420 MAPK8IP3Q9UPT6 1336 aa24.37■■□□□ 1.49
SEMA4C-205ENST00000474420 PDE3AQ14432 1141 aa24.37■■□□□ 1.49
SEMA4C-205ENST00000474420 CARD14Q9BXL6 1004 aa24.37■■□□□ 1.49
SEMA4C-205ENST00000474420 ANTXR1Q9H6X2 564 aa24.37■■□□□ 1.49
SEMA4C-205ENST00000474420 PCDHB15Q9Y5E8 787 aa24.37■■□□□ 1.49
SEMA4C-205ENST00000474420 RLBP1P12271 317 aa24.37■■□□□ 1.49
SEMA4C-205ENST00000474420 WWC1Q8IX03 1113 aa24.37■■□□□ 1.49
SEMA4C-205ENST00000474420 ATP10AO60312 1499 aa24.36■■□□□ 1.49
SEMA4C-205ENST00000474420 SCAF11Q99590 1463 aaKnown RBP24.36■■□□□ 1.49
SEMA4C-205ENST00000474420 TNNT2P45379 298 aaPredicted RBP24.35■■□□□ 1.49
SEMA4C-205ENST00000474420 TBC1D2Q9BYX2 928 aa24.34■■□□□ 1.49
SEMA4C-205ENST00000474420 RSPH6AQ9H0K4 717 aa24.34■■□□□ 1.49
SEMA4C-205ENST00000474420 MAST1Q9Y2H9 1570 aa24.34■■□□□ 1.49
SEMA4C-205ENST00000474420 GZF1Q9H116 711 aaPredicted RBP24.32■■□□□ 1.48
SEMA4C-205ENST00000474420 PDZRN3Q9UPQ7 1066 aa24.31■■□□□ 1.48
SEMA4C-205ENST00000474420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.31■■□□□ 1.48
SEMA4C-205ENST00000474420 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
SEMA4C-205ENST00000474420 TBC1D32Q96NH3 1257 aa24.3■■□□□ 1.48
SEMA4C-205ENST00000474420 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
SEMA4C-205ENST00000474420 PLXNC1O60486 1568 aa24.29■■□□□ 1.48
SEMA4C-205ENST00000474420 RARSP54136 660 aaKnown RBP24.29■■□□□ 1.48
SEMA4C-205ENST00000474420 NPC1L1Q9UHC9 1359 aa24.29■■□□□ 1.48
SEMA4C-205ENST00000474420 CFAP70Q5T0N1 1121 aa24.29■■□□□ 1.48
SEMA4C-205ENST00000474420 PANK2Q9BZ23 570 aa24.27■■□□□ 1.48
SEMA4C-205ENST00000474420 UPF2Q9HAU5 1272 aaKnown RBP24.26■■□□□ 1.47
SEMA4C-205ENST00000474420 XRCC6P12956 609 aaKnown RBP eCLIP24.25■■□□□ 1.474e-7■■■□□ 17
SEMA4C-205ENST00000474420 L1TD1Q5T7N2 865 aaKnown RBP24.24■■□□□ 1.47
SEMA4C-205ENST00000474420 PMFBP1Q8TBY8 1022 aa24.23■■□□□ 1.47
SEMA4C-205ENST00000474420 KDM5AP29375 1690 aaKnown RBP24.23■■□□□ 1.47
SEMA4C-205ENST00000474420 SCAPERQ9BY12 1400 aa24.22■■□□□ 1.47
SEMA4C-205ENST00000474420 TCP11L2Q8N4U5 519 aa24.22■■□□□ 1.47
SEMA4C-205ENST00000474420 SPHKAPQ2M3C7 1700 aa24.22■■□□□ 1.47
SEMA4C-205ENST00000474420 ERVK-7P63135 1459 aa24.22■■□□□ 1.47
SEMA4C-205ENST00000474420 CEP152O94986 1710 aa24.21■■□□□ 1.47
SEMA4C-205ENST00000474420 NINLQ9Y2I6 1382 aa24.21■■□□□ 1.47
SEMA4C-205ENST00000474420 CLTCL1P53675 1640 aa24.2■■□□□ 1.47
SEMA4C-205ENST00000474420 TRAPPC8Q9Y2L5 1435 aa24.2■■□□□ 1.46
SEMA4C-205ENST00000474420 MCM4P33991 863 aa24.19■■□□□ 1.46
SEMA4C-205ENST00000474420 ADGRF5Q8IZF2 1346 aa24.19■■□□□ 1.46
SEMA4C-205ENST00000474420 GOLGA6L3A6NEY3 463 aa24.18■■□□□ 1.46
SEMA4C-205ENST00000474420 MFAP1P55081 439 aaKnown RBP24.18■■□□□ 1.46
SEMA4C-205ENST00000474420 AFAP1Q8N556 730 aa24.17■■□□□ 1.46
SEMA4C-205ENST00000474420 MORC1Q86VD1 984 aa24.16■■□□□ 1.46
SEMA4C-205ENST00000474420 TRPM2O94759 1503 aa24.16■■□□□ 1.46
SEMA4C-205ENST00000474420 POLR3AO14802 1390 aaPredicted RBP24.16■■□□□ 1.46
SEMA4C-205ENST00000474420 RUNDC1Q96C34 613 aa24.15■■□□□ 1.46
SEMA4C-205ENST00000474420 NGEFQ8N5V2 710 aa24.14■■□□□ 1.46
SEMA4C-205ENST00000474420 RWDD1Q9H446 243 aaPredicted RBP24.14■■□□□ 1.46
SEMA4C-205ENST00000474420 FSD2A1L4K1 749 aa24.14■■□□□ 1.45
SEMA4C-205ENST00000474420 SLC12A5Q9H2X9 1139 aa24.13■■□□□ 1.45
SEMA4C-205ENST00000474420 C22orf23Q9BZE7 217 aa24.13■■□□□ 1.45
SEMA4C-205ENST00000474420 UGGT1Q9NYU2 1555 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms