RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 ITGAEP38570 1179 aa24.85■■□□□ 1.57
CPA4-205ENST00000474254 BCANQ96GW7 911 aa24.84■■□□□ 1.57
CPA4-205ENST00000474254 SLC26A8Q96RN1 970 aa24.83■■□□□ 1.57
CPA4-205ENST00000474254 MYO5BQ9ULV0 1848 aa24.82■■□□□ 1.56
CPA4-205ENST00000474254 KCNA6P17658 529 aa24.82■■□□□ 1.56
CPA4-205ENST00000474254 TMEM94Q12767 1356 aa24.81■■□□□ 1.56
CPA4-205ENST00000474254 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
CPA4-205ENST00000474254 NWD1Q149M9 1564 aa24.79■■□□□ 1.56
CPA4-205ENST00000474254 NKTRP30414 1462 aaKnown RBP24.78■■□□□ 1.56
CPA4-205ENST00000474254 PPP1R15AO75807 674 aaPredicted RBP24.76■■□□□ 1.55
CPA4-205ENST00000474254 FAM135BQ49AJ0 1406 aa24.76■■□□□ 1.55
CPA4-205ENST00000474254 HDGFP51858 240 aaKnown RBP24.75■■□□□ 1.55
CPA4-205ENST00000474254 RIMS2Q9UQ26 1411 aa24.74■■□□□ 1.55
CPA4-205ENST00000474254 TMEM131LA2VDJ0 1609 aa24.74■■□□□ 1.55
CPA4-205ENST00000474254 ROBO1Q9Y6N7 1651 aa24.74■■□□□ 1.55
CPA4-205ENST00000474254 ZFYVE9O95405 1425 aa24.73■■□□□ 1.55
CPA4-205ENST00000474254 PLEKHG1Q9ULL1 1385 aa24.73■■□□□ 1.55
CPA4-205ENST00000474254 NAIPQ13075 1403 aa24.72■■□□□ 1.55
CPA4-205ENST00000474254 NUP155O75694 1391 aa24.72■■□□□ 1.55
CPA4-205ENST00000474254 SPHKAPQ2M3C7 1700 aa24.72■■□□□ 1.55
CPA4-205ENST00000474254 MSH6P52701 1360 aa24.71■■□□□ 1.55
CPA4-205ENST00000474254 CHD2O14647 1828 aaKnown RBP24.71■■□□□ 1.55
CPA4-205ENST00000474254 CHGAP10645 457 aaKnown RBP24.71■■□□□ 1.55
CPA4-205ENST00000474254 RBM33Q96EV2 1170 aaKnown RBP24.71■■□□□ 1.55
CPA4-205ENST00000474254 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
CPA4-205ENST00000474254 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.67■■□□□ 1.54
CPA4-205ENST00000474254 DIP2AQ14689 1571 aa24.63■■□□□ 1.53
CPA4-205ENST00000474254 PHLPP1O60346 1717 aa24.62■■□□□ 1.53
CPA4-205ENST00000474254 TBX22Q9Y458 520 aa24.61■■□□□ 1.53
CPA4-205ENST00000474254 NUTM2DQ5VT03 806 aaPredicted RBP24.6■■□□□ 1.53
CPA4-205ENST00000474254 C14orf37Q86TY3 774 aa24.6■■□□□ 1.53
CPA4-205ENST00000474254 SLAIN2Q9P270 581 aa24.59■■□□□ 1.53
CPA4-205ENST00000474254 ADAMTS13Q76LX8 1427 aa24.56■■□□□ 1.52
CPA4-205ENST00000474254 NCOA3Q9Y6Q9 1424 aa24.56■■□□□ 1.52
CPA4-205ENST00000474254 RGS17Q9UGC6 210 aaPredicted RBP24.56■■□□□ 1.52
CPA4-205ENST00000474254 TRPM2O94759 1503 aa24.56■■□□□ 1.52
CPA4-205ENST00000474254 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
CPA4-205ENST00000474254 CLTCL1P53675 1640 aa24.54■■□□□ 1.52
CPA4-205ENST00000474254 KIF1BO60333 1816 aa24.54■■□□□ 1.52
CPA4-205ENST00000474254 JCADQ9P266 1359 aa24.52■■□□□ 1.52
CPA4-205ENST00000474254 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.52■■□□□ 1.52
CPA4-205ENST00000474254 ATF3P18847 181 aa24.49■■□□□ 1.51
CPA4-205ENST00000474254 COL16A1Q07092 1604 aaPredicted RBP24.49■■□□□ 1.51
CPA4-205ENST00000474254 CADPS2Q86UW7 1296 aa24.48■■□□□ 1.51
CPA4-205ENST00000474254 C19orf44Q9H6X5 657 aa24.47■■□□□ 1.51
CPA4-205ENST00000474254 ZNF326Q5BKZ1 582 aaKnown RBP24.46■■□□□ 1.51
CPA4-205ENST00000474254 AMOTL2Q9Y2J4 779 aa24.46■■□□□ 1.51
CPA4-205ENST00000474254 POTEAQ6S8J7 498 aa24.45■■□□□ 1.5
CPA4-205ENST00000474254 NRXN3Q9Y4C0 1643 aa24.44■■□□□ 1.5
CPA4-205ENST00000474254 SETBP1Q9Y6X0 1596 aa24.44■■□□□ 1.5
CPA4-205ENST00000474254 AHDC1Q5TGY3 1603 aaPredicted RBP24.43■■□□□ 1.5
CPA4-205ENST00000474254 TRIM52Q96A61 297 aa24.43■■□□□ 1.5
CPA4-205ENST00000474254 PTPRUQ92729 1446 aa24.43■■□□□ 1.5
CPA4-205ENST00000474254 XRN1Q8IZH2 1706 aaKnown RBP24.42■■□□□ 1.5
CPA4-205ENST00000474254 NEXMIFQ5QGS0 1516 aa24.41■■□□□ 1.5
CPA4-205ENST00000474254 MEX3CQ5U5Q3 659 aaKnown RBP24.39■■□□□ 1.49
CPA4-205ENST00000474254 SHPRHQ149N8 1683 aa24.39■■□□□ 1.49
CPA4-205ENST00000474254 SPATA31A6Q5VVP1 1343 aa24.38■■□□□ 1.49
CPA4-205ENST00000474254 DCCP43146 1447 aa24.38■■□□□ 1.49
CPA4-205ENST00000474254 SLC4A1APQ9BWU0 796 aaKnown RBP24.38■■□□□ 1.49
CPA4-205ENST00000474254 PPLO60437 1756 aa24.35■■□□□ 1.49
CPA4-205ENST00000474254 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
CPA4-205ENST00000474254 LRP6O75581 1613 aa24.35■■□□□ 1.49
CPA4-205ENST00000474254 BRINP3Q76B58 766 aa24.33■■□□□ 1.49
CPA4-205ENST00000474254 METP08581 1390 aa24.32■■□□□ 1.48
CPA4-205ENST00000474254 ASXL1Q8IXJ9 1541 aa24.32■■□□□ 1.48
CPA4-205ENST00000474254 SETD5Q9C0A6 1442 aa24.32■■□□□ 1.48
CPA4-205ENST00000474254 MST1RQ04912 1400 aa24.29■■□□□ 1.48
CPA4-205ENST00000474254 NHSL1Q5SYE7 1610 aa24.29■■□□□ 1.48
CPA4-205ENST00000474254 ZNF772Q68DY9 489 aaPredicted RBP24.29■■□□□ 1.48
CPA4-205ENST00000474254 ADGRL3Q9HAR2 1447 aa24.28■■□□□ 1.48
CPA4-205ENST00000474254 NALCNQ8IZF0 1738 aa24.28■■□□□ 1.48
CPA4-205ENST00000474254 ACIN1Q9UKV3 1341 aaKnown RBP24.28■■□□□ 1.48
CPA4-205ENST00000474254 IFT172Q9UG01 1749 aa24.27■■□□□ 1.48
CPA4-205ENST00000474254 NUTM2BA6NNL0 878 aaPredicted RBP24.25■■□□□ 1.47
CPA4-205ENST00000474254 NUTM2EB1AL46 878 aaPredicted RBP24.25■■□□□ 1.47
CPA4-205ENST00000474254 FOXD1Q16676 465 aa24.25■■□□□ 1.47
CPA4-205ENST00000474254 NUTM2AQ8IVF1 878 aaPredicted RBP24.25■■□□□ 1.47
CPA4-205ENST00000474254 MPHOSPH9Q99550 1183 aa24.25■■□□□ 1.47
CPA4-205ENST00000474254 RAB3GAP2Q9H2M9 1393 aa24.24■■□□□ 1.47
CPA4-205ENST00000474254 CCDC144AA2RUR9 1427 aa24.24■■□□□ 1.47
CPA4-205ENST00000474254 VGFO15240 615 aaPredicted RBP24.22■■□□□ 1.47
CPA4-205ENST00000474254 LRRC59Q96AG4 307 aaKnown RBP24.2■■□□□ 1.46
CPA4-205ENST00000474254 PTCH1Q13635 1447 aa24.19■■□□□ 1.46
CPA4-205ENST00000474254 SPATA31E1Q6ZUB1 1445 aa24.19■■□□□ 1.46
CPA4-205ENST00000474254 RPGRIP1LQ68CZ1 1315 aa24.19■■□□□ 1.46
CPA4-205ENST00000474254 RXRBP28702 533 aa24.15■■□□□ 1.46
CPA4-205ENST00000474254 AFF2P51816 1311 aa24.14■■□□□ 1.46
CPA4-205ENST00000474254 C1orf167Q5SNV9 1468 aa24.14■■□□□ 1.46
CPA4-205ENST00000474254 DDX17Q92841 729 aaKnown RBP24.14■■□□□ 1.45
CPA4-205ENST00000474254 PNPLA6Q8IY17 1366 aa24.13■■□□□ 1.45
CPA4-205ENST00000474254 ROBO2Q9HCK4 1378 aa24.13■■□□□ 1.45
CPA4-205ENST00000474254 PRAG1Q86YV5 1406 aa24.11■■□□□ 1.45
CPA4-205ENST00000474254 LAMC1P11047 1609 aa24.1■■□□□ 1.45
CPA4-205ENST00000474254 CDK12Q9NYV4 1490 aaPredicted RBP24.09■■□□□ 1.45
CPA4-205ENST00000474254 ANKRD30BQ9BXX2 1392 aa24.09■■□□□ 1.45
CPA4-205ENST00000474254 C8orf37Q96NL8 207 aa24.09■■□□□ 1.45
CPA4-205ENST00000474254 UPF1Q92900 1129 aaKnown RBP eCLIP24.06■■□□□ 1.44
CPA4-205ENST00000474254 HRCP23327 699 aa24.05■■□□□ 1.44
CPA4-205ENST00000474254 ORAI2Q96SN7 254 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms