RNA–Protein interactions for RNA: ENST00000473894.1

RAB4A-202, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4A, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-202ENST00000473894 IFT172Q9UG01 1749 aa25.79■■□□□ 1.72
RAB4A-202ENST00000473894 RIMS2Q9UQ26 1411 aa25.79■■□□□ 1.72
RAB4A-202ENST00000473894 PPLO60437 1756 aa25.78■■□□□ 1.72
RAB4A-202ENST00000473894 CCER1Q8TC90 406 aaPredicted RBP25.78■■□□□ 1.72
RAB4A-202ENST00000473894 POLR1AO95602 1720 aaPredicted RBP25.77■■□□□ 1.72
RAB4A-202ENST00000473894 STRCQ7RTU9 1775 aa25.77■■□□□ 1.72
RAB4A-202ENST00000473894 MED14O60244 1454 aa25.76■■□□□ 1.71
RAB4A-202ENST00000473894 SCAF11Q99590 1463 aaKnown RBP25.76■■□□□ 1.71
RAB4A-202ENST00000473894 HDGFP51858 240 aaKnown RBP25.75■■□□□ 1.71
RAB4A-202ENST00000473894 ANKLE2Q86XL3 938 aa25.75■■□□□ 1.71
RAB4A-202ENST00000473894 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.75■■□□□ 1.71
RAB4A-202ENST00000473894 LTKP29376 864 aa25.74■■□□□ 1.71
RAB4A-202ENST00000473894 ZNF326Q5BKZ1 582 aaKnown RBP25.73■■□□□ 1.71
RAB4A-202ENST00000473894 STAC3Q96MF2 364 aa25.73■■□□□ 1.71
RAB4A-202ENST00000473894 RGL3Q3MIN7 710 aa25.72■■□□□ 1.71
RAB4A-202ENST00000473894 EID1Q9Y6B2 187 aa25.72■■□□□ 1.71
RAB4A-202ENST00000473894 TXNDC2Q86VQ3 553 aa25.71■■□□□ 1.71
RAB4A-202ENST00000473894 MYOM2P54296 1465 aa25.71■■□□□ 1.71
RAB4A-202ENST00000473894 NEUROD1Q13562 356 aa25.69■■□□□ 1.7
RAB4A-202ENST00000473894 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
RAB4A-202ENST00000473894 NRXN1Q9ULB1 1477 aa25.68■■□□□ 1.7
RAB4A-202ENST00000473894 VGFO15240 615 aaPredicted RBP25.68■■□□□ 1.7
RAB4A-202ENST00000473894 NCKAP5LQ9HCH0 1330 aa25.66■■□□□ 1.7
RAB4A-202ENST00000473894 TIMELESSQ9UNS1 1208 aa25.66■■□□□ 1.7
RAB4A-202ENST00000473894 SETBP1Q9Y6X0 1596 aa25.65■■□□□ 1.7
RAB4A-202ENST00000473894 NPHP4O75161 1426 aaPredicted RBP25.65■■□□□ 1.7
RAB4A-202ENST00000473894 IQGAP1P46940 1657 aa25.64■■□□□ 1.7
RAB4A-202ENST00000473894 L3MBTL2Q969R5 705 aa25.64■■□□□ 1.7
RAB4A-202ENST00000473894 NRXN3Q9Y4C0 1643 aa25.62■■□□□ 1.69
RAB4A-202ENST00000473894 PPP1R15AO75807 674 aaPredicted RBP25.61■■□□□ 1.69
RAB4A-202ENST00000473894 DCAF11Q8TEB1 546 aa25.61■■□□□ 1.69
RAB4A-202ENST00000473894 PIK3C2GO75747 1445 aa25.61■■□□□ 1.69
RAB4A-202ENST00000473894 ADGRF5Q8IZF2 1346 aa25.61■■□□□ 1.69
RAB4A-202ENST00000473894 TONSLQ96HA7 1378 aa25.6■■□□□ 1.69
RAB4A-202ENST00000473894 NUTM2DQ5VT03 806 aaPredicted RBP25.6■■□□□ 1.69
RAB4A-202ENST00000473894 ADAMTS13Q76LX8 1427 aa25.59■■□□□ 1.69
RAB4A-202ENST00000473894 DIP2AQ14689 1571 aa25.59■■□□□ 1.69
RAB4A-202ENST00000473894 SETD1AO15047 1707 aaKnown RBP25.55■■□□□ 1.68
RAB4A-202ENST00000473894 PRAG1Q86YV5 1406 aa25.54■■□□□ 1.68
RAB4A-202ENST00000473894 TBX22Q9Y458 520 aa25.54■■□□□ 1.68
RAB4A-202ENST00000473894 ALKQ9UM73 1620 aa25.53■■□□□ 1.68
RAB4A-202ENST00000473894 DISP3Q9P2K9 1392 aa25.53■■□□□ 1.68
RAB4A-202ENST00000473894 LAMC1P11047 1609 aa25.52■■□□□ 1.68
RAB4A-202ENST00000473894 KDM2AQ9Y2K7 1162 aa25.52■■□□□ 1.68
RAB4A-202ENST00000473894 KIAA1210Q9ULL0 1709 aa25.51■■□□□ 1.68
RAB4A-202ENST00000473894 C14orf93Q9H972 538 aaKnown RBP25.51■■□□□ 1.67
RAB4A-202ENST00000473894 LTBP4Q8N2S1 1624 aa25.5■■□□□ 1.67
RAB4A-202ENST00000473894 PIK3R4Q99570 1358 aa25.5■■□□□ 1.67
RAB4A-202ENST00000473894 ILDR2Q71H61 639 aa25.49■■□□□ 1.67
RAB4A-202ENST00000473894 SLC26A8Q96RN1 970 aa25.46■■□□□ 1.67
RAB4A-202ENST00000473894 IQSEC2Q5JU85 1478 aa25.46■■□□□ 1.67
RAB4A-202ENST00000473894 BCANQ96GW7 911 aa25.44■■□□□ 1.66
RAB4A-202ENST00000473894 CHD2O14647 1828 aaKnown RBP25.44■■□□□ 1.66
RAB4A-202ENST00000473894 ADGRB1O14514 1584 aa25.44■■□□□ 1.66
RAB4A-202ENST00000473894 METP08581 1390 aa25.44■■□□□ 1.66
RAB4A-202ENST00000473894 ASXL1Q8IXJ9 1541 aa25.43■■□□□ 1.66
RAB4A-202ENST00000473894 TRPM1Q7Z4N2 1603 aa25.43■■□□□ 1.66
RAB4A-202ENST00000473894 NWD1Q149M9 1564 aa25.43■■□□□ 1.66
RAB4A-202ENST00000473894 NBPF8Q3BBV2 869 aa25.42■■□□□ 1.66
RAB4A-202ENST00000473894 CFAP70Q5T0N1 1121 aa25.42■■□□□ 1.66
RAB4A-202ENST00000473894 SOCS7O14512 581 aa25.41■■□□□ 1.66
RAB4A-202ENST00000473894 XRN1Q8IZH2 1706 aaKnown RBP25.39■■□□□ 1.65
RAB4A-202ENST00000473894 PTPRUQ92729 1446 aa25.38■■□□□ 1.65
RAB4A-202ENST00000473894 SENP3Q9H4L4 574 aaPredicted RBP25.38■■□□□ 1.65
RAB4A-202ENST00000473894 RALGAPBQ86X10 1494 aa25.38■■□□□ 1.65
RAB4A-202ENST00000473894 STRCP1A6NGW2 1772 aa25.37■■□□□ 1.65
RAB4A-202ENST00000473894 GPRASP1Q5JY77 1395 aa25.37■■□□□ 1.65
RAB4A-202ENST00000473894 KCNA6P17658 529 aa25.37■■□□□ 1.65
RAB4A-202ENST00000473894 TECPR2O15040 1411 aa25.36■■□□□ 1.65
RAB4A-202ENST00000473894 LRPPRCP42704 1394 aaKnown RBP25.35■■□□□ 1.65
RAB4A-202ENST00000473894 ZNF335Q9H4Z2 1342 aaPredicted RBP25.35■■□□□ 1.65
RAB4A-202ENST00000473894 NKTRP30414 1462 aaKnown RBP25.34■■□□□ 1.65
RAB4A-202ENST00000473894 ABCC11Q96J66 1382 aa25.34■■□□□ 1.65
RAB4A-202ENST00000473894 YTHDC2Q9H6S0 1430 aaKnown RBP25.34■■□□□ 1.65
RAB4A-202ENST00000473894 KNDC1Q76NI1 1749 aa25.34■■□□□ 1.65
RAB4A-202ENST00000473894 NBPF1Q3BBV0 1214 aa25.33■■□□□ 1.65
RAB4A-202ENST00000473894 TMEM132EQ6IEE7 984 aa25.32■■□□□ 1.64
RAB4A-202ENST00000473894 PTCH1Q13635 1447 aa25.31■■□□□ 1.64
RAB4A-202ENST00000473894 AMOTL2Q9Y2J4 779 aa25.31■■□□□ 1.64
RAB4A-202ENST00000473894 CPS1P31327 1500 aa25.31■■□□□ 1.64
RAB4A-202ENST00000473894 DLC1Q96QB1 1528 aa25.3■■□□□ 1.64
RAB4A-202ENST00000473894 SIRT1Q96EB6 747 aa25.29■■□□□ 1.64
RAB4A-202ENST00000473894 ROCK2O75116 1388 aaKnown RBP25.29■■□□□ 1.64
RAB4A-202ENST00000473894 UBAP1LF5GYI3 381 aa25.28■■□□□ 1.64
RAB4A-202ENST00000473894 FAM135BQ49AJ0 1406 aa25.26■■□□□ 1.63
RAB4A-202ENST00000473894 NCOA3Q9Y6Q9 1424 aa25.24■■□□□ 1.63
RAB4A-202ENST00000473894 ROBO2Q9HCK4 1378 aa25.24■■□□□ 1.63
RAB4A-202ENST00000473894 LRRC7Q96NW7 1537 aa25.23■■□□□ 1.63
RAB4A-202ENST00000473894 ARHGEF28Q8N1W1 1705 aaKnown RBP25.23■■□□□ 1.63
RAB4A-202ENST00000473894 ZEB1P37275 1124 aaPredicted RBP25.22■■□□□ 1.63
RAB4A-202ENST00000473894 STK26Q9P289 416 aa25.2■■□□□ 1.62
RAB4A-202ENST00000473894 XIRP1Q702N8 1843 aaKnown RBP25.19■■□□□ 1.62
RAB4A-202ENST00000473894 CARD11Q9BXL7 1154 aa25.19■■□□□ 1.62
RAB4A-202ENST00000473894 PROSER2Q86WR7 435 aaPredicted RBP25.17■■□□□ 1.62
RAB4A-202ENST00000473894 TRAK1Q9UPV9 953 aa25.17■■□□□ 1.62
RAB4A-202ENST00000473894 TMEM94Q12767 1356 aa25.16■■□□□ 1.62
RAB4A-202ENST00000473894 EIF3AQ14152 1382 aaKnown RBP25.14■■□□□ 1.61
RAB4A-202ENST00000473894 PLEKHH1Q9ULM0 1364 aa25.13■■□□□ 1.61
RAB4A-202ENST00000473894 PRAM1Q96QH2 718 aa25.12■■□□□ 1.61
RAB4A-202ENST00000473894 WAPLQ7Z5K2 1190 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms