RNA–Protein interactions for RNA: ENST00000473562.1

NOTCH4-203, Transcript of notch 4, humanhuman

TSL 1 (best)

Gene NOTCH4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-203ENST00000473562 POGKQ9P215 609 aa17.11■□□□□ 0.33
NOTCH4-203ENST00000473562 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
NOTCH4-203ENST00000473562 PTPRGP23470 1445 aa17.1■□□□□ 0.33
NOTCH4-203ENST00000473562 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
NOTCH4-203ENST00000473562 CCDC141Q6ZP82 1450 aa17.08■□□□□ 0.33
NOTCH4-203ENST00000473562 AFAP1Q8N556 730 aa17.08■□□□□ 0.32
NOTCH4-203ENST00000473562 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.08■□□□□ 0.32
NOTCH4-203ENST00000473562 CFAP70Q5T0N1 1121 aa17.07■□□□□ 0.32
NOTCH4-203ENST00000473562 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
NOTCH4-203ENST00000473562 SAMD9LQ8IVG5 1584 aa17.07■□□□□ 0.32
NOTCH4-203ENST00000473562 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
NOTCH4-203ENST00000473562 ARHGAP5Q13017 1502 aa17.06■□□□□ 0.32
NOTCH4-203ENST00000473562 CHGAP10645 457 aaKnown RBP17.06■□□□□ 0.32
NOTCH4-203ENST00000473562 SYNJ2O15056 1496 aa17.06■□□□□ 0.32
NOTCH4-203ENST00000473562 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
NOTCH4-203ENST00000473562 GZF1Q9H116 711 aaPredicted RBP17.05■□□□□ 0.32
NOTCH4-203ENST00000473562 GPRASP1Q5JY77 1395 aa17.05■□□□□ 0.32
NOTCH4-203ENST00000473562 SHANK2Q9UPX8 1470 aa17.05■□□□□ 0.32
NOTCH4-203ENST00000473562 CARD14Q9BXL6 1004 aa17.05■□□□□ 0.32
NOTCH4-203ENST00000473562 ABCA8O94911 1581 aa17.04■□□□□ 0.32
NOTCH4-203ENST00000473562 RLBP1P12271 317 aa17.03■□□□□ 0.32
NOTCH4-203ENST00000473562 USP19O94966 1318 aa17.03■□□□□ 0.32
NOTCH4-203ENST00000473562 NUTM2DQ5VT03 806 aaPredicted RBP17.02■□□□□ 0.32
NOTCH4-203ENST00000473562 PRDM15P57071 1507 aaPredicted RBP17.01■□□□□ 0.31
NOTCH4-203ENST00000473562 CENPJQ9HC77 1338 aaPredicted RBP17■□□□□ 0.31
NOTCH4-203ENST00000473562 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
NOTCH4-203ENST00000473562 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
NOTCH4-203ENST00000473562 MYO5CQ9NQX4 1742 aa16.98■□□□□ 0.31
NOTCH4-203ENST00000473562 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
NOTCH4-203ENST00000473562 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
NOTCH4-203ENST00000473562 TRAK1Q9UPV9 953 aa16.98■□□□□ 0.31
NOTCH4-203ENST00000473562 SLC12A5Q9H2X9 1139 aa16.97■□□□□ 0.31
NOTCH4-203ENST00000473562 ADGRF5Q8IZF2 1346 aa16.97■□□□□ 0.31
NOTCH4-203ENST00000473562 E9PSI1 815 aa16.96■□□□□ 0.31
NOTCH4-203ENST00000473562 TTC37Q6PGP7 1564 aa16.96■□□□□ 0.31
NOTCH4-203ENST00000473562 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
NOTCH4-203ENST00000473562 NKTRP30414 1462 aaKnown RBP16.95■□□□□ 0.3
NOTCH4-203ENST00000473562 NUP160Q12769 1436 aa16.95■□□□□ 0.3
NOTCH4-203ENST00000473562 KIF3BO15066 747 aa16.95■□□□□ 0.3
NOTCH4-203ENST00000473562 TRMT2AQ8IZ69 625 aaKnown RBP16.94■□□□□ 0.3
NOTCH4-203ENST00000473562 TCP11L2Q8N4U5 519 aa16.93■□□□□ 0.3
NOTCH4-203ENST00000473562 TSR2Q969E8 191 aaKnown RBP16.93■□□□□ 0.3
NOTCH4-203ENST00000473562 PDZRN3Q9UPQ7 1066 aa16.93■□□□□ 0.3
NOTCH4-203ENST00000473562 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
NOTCH4-203ENST00000473562 TRAPPC8Q9Y2L5 1435 aa16.92■□□□□ 0.3
NOTCH4-203ENST00000473562 MORC1Q86VD1 984 aa16.92■□□□□ 0.3
NOTCH4-203ENST00000473562 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
NOTCH4-203ENST00000473562 ARHGEF5Q12774 1597 aa16.91■□□□□ 0.3
NOTCH4-203ENST00000473562 ASXL1Q8IXJ9 1541 aa16.91■□□□□ 0.3
NOTCH4-203ENST00000473562 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
NOTCH4-203ENST00000473562 SPAG9O60271 1321 aaKnown RBP16.9■□□□□ 0.3
NOTCH4-203ENST00000473562 TBC1D2Q9BYX2 928 aa16.9■□□□□ 0.3
NOTCH4-203ENST00000473562 PANK2Q9BZ23 570 aa16.9■□□□□ 0.3
NOTCH4-203ENST00000473562 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.29
NOTCH4-203ENST00000473562 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
NOTCH4-203ENST00000473562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.29
NOTCH4-203ENST00000473562 MTHFSP49914 203 aa16.88■□□□□ 0.29
NOTCH4-203ENST00000473562 EIF3AQ14152 1382 aaKnown RBP16.88■□□□□ 0.29
NOTCH4-203ENST00000473562 CGNL1Q0VF96 1302 aa16.88■□□□□ 0.29
NOTCH4-203ENST00000473562 RRAGDQ9NQL2 400 aaPredicted RBP16.88■□□□□ 0.29
NOTCH4-203ENST00000473562 EFCAB2Q5VUJ9 269 aa16.87■□□□□ 0.29
NOTCH4-203ENST00000473562 ERCC6L2Q5T890 1561 aa16.86■□□□□ 0.29
NOTCH4-203ENST00000473562 U2AF1L5P0DN76 240 aaPredicted RBP16.86■□□□□ 0.29
NOTCH4-203ENST00000473562 U2AF1Q01081 240 aaKnown RBP eCLIP16.86■□□□□ 0.29
NOTCH4-203ENST00000473562 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
NOTCH4-203ENST00000473562 PREX2Q70Z35 1606 aa16.86■□□□□ 0.29
NOTCH4-203ENST00000473562 SCAF11Q99590 1463 aaKnown RBP16.86■□□□□ 0.29
NOTCH4-203ENST00000473562 BECN1Q14457 450 aa16.86■□□□□ 0.29
NOTCH4-203ENST00000473562 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
NOTCH4-203ENST00000473562 PDE3AQ14432 1141 aa16.84■□□□□ 0.29
NOTCH4-203ENST00000473562 INSRP06213 1382 aa16.84■□□□□ 0.29
NOTCH4-203ENST00000473562 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.29
NOTCH4-203ENST00000473562 PIK3C2GO75747 1445 aa16.83■□□□□ 0.29
NOTCH4-203ENST00000473562 FTSJ3Q8IY81 847 aaKnown RBP16.83■□□□□ 0.28
NOTCH4-203ENST00000473562 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
NOTCH4-203ENST00000473562 UNC13BO14795 1591 aa16.82■□□□□ 0.28
NOTCH4-203ENST00000473562 ATP10AO60312 1499 aa16.82■□□□□ 0.28
NOTCH4-203ENST00000473562 EIF2AK4Q9P2K8 1649 aaKnown RBP16.82■□□□□ 0.28
NOTCH4-203ENST00000473562 MAPK8IP3Q9UPT6 1336 aa16.81■□□□□ 0.28
NOTCH4-203ENST00000473562 CFAP65Q6ZU64 1925 aaKnown RBP16.81■□□□□ 0.28
NOTCH4-203ENST00000473562 FBLN1P23142 703 aa16.81■□□□□ 0.28
NOTCH4-203ENST00000473562 ITPRIPQ8IWB1 547 aa16.81■□□□□ 0.28
NOTCH4-203ENST00000473562 ANTXR1Q9H6X2 564 aa16.81■□□□□ 0.28
NOTCH4-203ENST00000473562 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
NOTCH4-203ENST00000473562 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
NOTCH4-203ENST00000473562 MAST1Q9Y2H9 1570 aa16.8■□□□□ 0.28
NOTCH4-203ENST00000473562 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
NOTCH4-203ENST00000473562 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
NOTCH4-203ENST00000473562 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
NOTCH4-203ENST00000473562 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
NOTCH4-203ENST00000473562 STK26Q9P289 416 aa16.79■□□□□ 0.28
NOTCH4-203ENST00000473562 GGT6Q6P531 493 aa16.78■□□□□ 0.28
NOTCH4-203ENST00000473562 DUOX2Q9NRD8 1548 aa16.78■□□□□ 0.28
NOTCH4-203ENST00000473562 XRCC6P12956 609 aaKnown RBP eCLIP16.78■□□□□ 0.28
NOTCH4-203ENST00000473562 EXOSC9Q06265 439 aaKnown RBP16.78■□□□□ 0.28
NOTCH4-203ENST00000473562 CABP2Q9NPB3 220 aa16.78■□□□□ 0.28
NOTCH4-203ENST00000473562 NLRP1Q9C000 1473 aa16.77■□□□□ 0.28
NOTCH4-203ENST00000473562 MYOM1P52179 1685 aa16.77■□□□□ 0.27
NOTCH4-203ENST00000473562 PMFBP1Q8TBY8 1022 aa16.76■□□□□ 0.27
NOTCH4-203ENST00000473562 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms