RNA–Protein interactions for RNA: ENST00000473195.5

TRAIP-203, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-203ENST00000473195 SLC26A8Q96RN1 970 aa18.53■□□□□ 0.56
TRAIP-203ENST00000473195 SPHKAPQ2M3C7 1700 aa18.52■□□□□ 0.56
TRAIP-203ENST00000473195 SLC52A1Q9NWF4 448 aa18.51■□□□□ 0.55
TRAIP-203ENST00000473195 CHD2O14647 1828 aaKnown RBP18.51■□□□□ 0.55
TRAIP-203ENST00000473195 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
TRAIP-203ENST00000473195 NUP155O75694 1391 aa18.5■□□□□ 0.55
TRAIP-203ENST00000473195 ZFYVE9O95405 1425 aa18.49■□□□□ 0.55
TRAIP-203ENST00000473195 RBM33Q96EV2 1170 aaKnown RBP18.49■□□□□ 0.55
TRAIP-203ENST00000473195 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
TRAIP-203ENST00000473195 BCANQ96GW7 911 aa18.48■□□□□ 0.55
TRAIP-203ENST00000473195 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
TRAIP-203ENST00000473195 NUTM2DQ5VT03 806 aaPredicted RBP18.47■□□□□ 0.55
TRAIP-203ENST00000473195 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
TRAIP-203ENST00000473195 PPP1R15AO75807 674 aaPredicted RBP18.43■□□□□ 0.54
TRAIP-203ENST00000473195 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
TRAIP-203ENST00000473195 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
TRAIP-203ENST00000473195 KCNA6P17658 529 aa18.42■□□□□ 0.54
TRAIP-203ENST00000473195 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
TRAIP-203ENST00000473195 NAIPQ13075 1403 aa18.4■□□□□ 0.54
TRAIP-203ENST00000473195 KIF1BO60333 1816 aa18.4■□□□□ 0.54
TRAIP-203ENST00000473195 PROSER2Q86WR7 435 aaPredicted RBP18.4■□□□□ 0.54
TRAIP-203ENST00000473195 ROBO1Q9Y6N7 1651 aa18.4■□□□□ 0.54
TRAIP-203ENST00000473195 NKTRP30414 1462 aaKnown RBP18.39■□□□□ 0.53
TRAIP-203ENST00000473195 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
TRAIP-203ENST00000473195 NRXN3Q9Y4C0 1643 aa18.37■□□□□ 0.53
TRAIP-203ENST00000473195 DIP2AQ14689 1571 aa18.34■□□□□ 0.53
TRAIP-203ENST00000473195 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
TRAIP-203ENST00000473195 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRAIP-203ENST00000473195 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.33■□□□□ 0.52
TRAIP-203ENST00000473195 TRPM2O94759 1503 aa18.33■□□□□ 0.52
TRAIP-203ENST00000473195 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
TRAIP-203ENST00000473195 ZNF326Q5BKZ1 582 aaKnown RBP18.31■□□□□ 0.52
TRAIP-203ENST00000473195 TRIM52Q96A61 297 aa18.31■□□□□ 0.52
TRAIP-203ENST00000473195 TBX22Q9Y458 520 aa18.31■□□□□ 0.52
TRAIP-203ENST00000473195 HFM1A2PYH4 1435 aa18.31■□□□□ 0.52
TRAIP-203ENST00000473195 PTPRUQ92729 1446 aa18.31■□□□□ 0.52
TRAIP-203ENST00000473195 NEXMIFQ5QGS0 1516 aa18.3■□□□□ 0.52
TRAIP-203ENST00000473195 MSH6P52701 1360 aa18.3■□□□□ 0.52
TRAIP-203ENST00000473195 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
TRAIP-203ENST00000473195 FAM135BQ49AJ0 1406 aa18.29■□□□□ 0.52
TRAIP-203ENST00000473195 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
TRAIP-203ENST00000473195 XRN1Q8IZH2 1706 aaKnown RBP18.29■□□□□ 0.52
TRAIP-203ENST00000473195 PPLO60437 1756 aa18.25■□□□□ 0.51
TRAIP-203ENST00000473195 SETD1AO15047 1707 aaKnown RBP18.25■□□□□ 0.51
TRAIP-203ENST00000473195 FOXD1Q16676 465 aa18.24■□□□□ 0.51
TRAIP-203ENST00000473195 C14orf37Q86TY3 774 aa18.24■□□□□ 0.51
TRAIP-203ENST00000473195 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
TRAIP-203ENST00000473195 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
TRAIP-203ENST00000473195 SLC4A1APQ9BWU0 796 aaKnown RBP18.23■□□□□ 0.51
TRAIP-203ENST00000473195 SLAIN2Q9P270 581 aa18.23■□□□□ 0.51
TRAIP-203ENST00000473195 METP08581 1390 aa18.22■□□□□ 0.51
TRAIP-203ENST00000473195 NALCNQ8IZF0 1738 aa18.22■□□□□ 0.51
TRAIP-203ENST00000473195 COL16A1Q07092 1604 aaPredicted RBP18.21■□□□□ 0.51
TRAIP-203ENST00000473195 NCOA3Q9Y6Q9 1424 aa18.19■□□□□ 0.5
TRAIP-203ENST00000473195 IFT172Q9UG01 1749 aa18.18■□□□□ 0.5
TRAIP-203ENST00000473195 RGS17Q9UGC6 210 aaPredicted RBP18.16■□□□□ 0.5
TRAIP-203ENST00000473195 ATF3P18847 181 aa18.15■□□□□ 0.5
TRAIP-203ENST00000473195 C19orf44Q9H6X5 657 aa18.15■□□□□ 0.5
TRAIP-203ENST00000473195 AHDC1Q5TGY3 1603 aaPredicted RBP18.13■□□□□ 0.49
TRAIP-203ENST00000473195 CADPS2Q86UW7 1296 aa18.13■□□□□ 0.49
TRAIP-203ENST00000473195 NHSL1Q5SYE7 1610 aa18.12■□□□□ 0.49
TRAIP-203ENST00000473195 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
TRAIP-203ENST00000473195 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
TRAIP-203ENST00000473195 MST1RQ04912 1400 aa18.1■□□□□ 0.49
TRAIP-203ENST00000473195 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
TRAIP-203ENST00000473195 JCADQ9P266 1359 aa18.09■□□□□ 0.49
TRAIP-203ENST00000473195 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
TRAIP-203ENST00000473195 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
TRAIP-203ENST00000473195 CCDC144AA2RUR9 1427 aa18.08■□□□□ 0.49
TRAIP-203ENST00000473195 DCCP43146 1447 aa18.08■□□□□ 0.49
TRAIP-203ENST00000473195 ADGRL3Q9HAR2 1447 aa18.08■□□□□ 0.49
TRAIP-203ENST00000473195 RGL3Q3MIN7 710 aa18.08■□□□□ 0.48
TRAIP-203ENST00000473195 LRP6O75581 1613 aa18.08■□□□□ 0.48
TRAIP-203ENST00000473195 POTEAQ6S8J7 498 aa18.07■□□□□ 0.48
TRAIP-203ENST00000473195 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
TRAIP-203ENST00000473195 RPGRIP1LQ68CZ1 1315 aa18.06■□□□□ 0.48
TRAIP-203ENST00000473195 DDX17Q92841 729 aaKnown RBP18.06■□□□□ 0.48
TRAIP-203ENST00000473195 SETD5Q9C0A6 1442 aa18.06■□□□□ 0.48
TRAIP-203ENST00000473195 ADGRF5Q8IZF2 1346 aa18.05■□□□□ 0.48
TRAIP-203ENST00000473195 SPATA31E1Q6ZUB1 1445 aa18.05■□□□□ 0.48
TRAIP-203ENST00000473195 SRCAPQ6ZRS2 3230 aa18.04■□□□□ 0.48
TRAIP-203ENST00000473195 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
TRAIP-203ENST00000473195 RAB3GAP2Q9H2M9 1393 aa18.02■□□□□ 0.47
TRAIP-203ENST00000473195 KNDC1Q76NI1 1749 aa18.01■□□□□ 0.47
TRAIP-203ENST00000473195 C1orf167Q5SNV9 1468 aa18■□□□□ 0.47
TRAIP-203ENST00000473195 NUTM2BA6NNL0 878 aaPredicted RBP17.99■□□□□ 0.47
TRAIP-203ENST00000473195 NUTM2EB1AL46 878 aaPredicted RBP17.99■□□□□ 0.47
TRAIP-203ENST00000473195 NUTM2AQ8IVF1 878 aaPredicted RBP17.99■□□□□ 0.47
TRAIP-203ENST00000473195 MEX3CQ5U5Q3 659 aaKnown RBP17.98■□□□□ 0.47
TRAIP-203ENST00000473195 STK26Q9P289 416 aa17.98■□□□□ 0.47
TRAIP-203ENST00000473195 RGPD8O14715 1765 aaPredicted RBP17.98■□□□□ 0.47
TRAIP-203ENST00000473195 SPATA31A6Q5VVP1 1343 aa17.98■□□□□ 0.47
TRAIP-203ENST00000473195 TMEM132EQ6IEE7 984 aa17.97■□□□□ 0.47
TRAIP-203ENST00000473195 LAMC1P11047 1609 aa17.97■□□□□ 0.47
TRAIP-203ENST00000473195 PRAG1Q86YV5 1406 aa17.97■□□□□ 0.47
TRAIP-203ENST00000473195 ORAI2Q96SN7 254 aa17.96■□□□□ 0.47
TRAIP-203ENST00000473195 PIK3C2GO75747 1445 aa17.96■□□□□ 0.47
TRAIP-203ENST00000473195 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
TRAIP-203ENST00000473195 CDC42BPGQ6DT37 1551 aa17.95■□□□□ 0.46
TRAIP-203ENST00000473195 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms