RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 RIMS2Q9UQ26 1411 aa30.48■■■□□ 2.47
TOP3A-204ENST00000472959 ZNF326Q5BKZ1 582 aaKnown RBP30.47■■■□□ 2.47
TOP3A-204ENST00000472959 NEURL4Q96JN8 1562 aa30.46■■■□□ 2.47
TOP3A-204ENST00000472959 POLR1AO95602 1720 aaPredicted RBP30.45■■■□□ 2.47
TOP3A-204ENST00000472959 PPP1R15AO75807 674 aaPredicted RBP30.43■■■□□ 2.46
TOP3A-204ENST00000472959 RPGRIP1LQ68CZ1 1315 aa30.42■■■□□ 2.46
TOP3A-204ENST00000472959 KIF1BO60333 1816 aa30.4■■■□□ 2.46
TOP3A-204ENST00000472959 MYO5BQ9ULV0 1848 aa30.4■■■□□ 2.46
TOP3A-204ENST00000472959 SPATA31E1Q6ZUB1 1445 aa30.39■■■□□ 2.46
TOP3A-204ENST00000472959 PLEKHG1Q9ULL1 1385 aa30.38■■■□□ 2.45
TOP3A-204ENST00000472959 DHX57Q6P158 1386 aaKnown RBP30.37■■■□□ 2.45
TOP3A-204ENST00000472959 NUTM2DQ5VT03 806 aaPredicted RBP30.36■■■□□ 2.45
TOP3A-204ENST00000472959 IQGAP1P46940 1657 aa30.36■■■□□ 2.45
TOP3A-204ENST00000472959 RGL3Q3MIN7 710 aa30.35■■■□□ 2.45
TOP3A-204ENST00000472959 BCANQ96GW7 911 aa30.34■■■□□ 2.45
TOP3A-204ENST00000472959 VGFO15240 615 aaPredicted RBP30.33■■■□□ 2.45
TOP3A-204ENST00000472959 NEXMIFQ5QGS0 1516 aa30.32■■■□□ 2.44
TOP3A-204ENST00000472959 SLC26A8Q96RN1 970 aa30.27■■■□□ 2.44
TOP3A-204ENST00000472959 ZNF335Q9H4Z2 1342 aaPredicted RBP30.26■■■□□ 2.44
TOP3A-204ENST00000472959 TBX22Q9Y458 520 aa30.26■■■□□ 2.43
TOP3A-204ENST00000472959 SENP3Q9H4L4 574 aaPredicted RBP30.22■■■□□ 2.43
TOP3A-204ENST00000472959 ADAMTS13Q76LX8 1427 aa30.21■■■□□ 2.43
TOP3A-204ENST00000472959 STAC3Q96MF2 364 aa30.19■■■□□ 2.42
TOP3A-204ENST00000472959 SETBP1Q9Y6X0 1596 aa30.19■■■□□ 2.42
TOP3A-204ENST00000472959 LTBP4Q8N2S1 1624 aa30.18■■■□□ 2.42
TOP3A-204ENST00000472959 PPLO60437 1756 aa30.18■■■□□ 2.42
TOP3A-204ENST00000472959 DIP2AQ14689 1571 aa30.16■■■□□ 2.42
TOP3A-204ENST00000472959 ADGRF5Q8IZF2 1346 aa30.16■■■□□ 2.42
TOP3A-204ENST00000472959 KCNA6P17658 529 aa30.15■■■□□ 2.42
TOP3A-204ENST00000472959 SIN3AQ96ST3 1273 aa30.15■■■□□ 2.42
TOP3A-204ENST00000472959 PIK3R4Q99570 1358 aa30.15■■■□□ 2.42
TOP3A-204ENST00000472959 CERKQ8TCT0 537 aa30.13■■■□□ 2.41
TOP3A-204ENST00000472959 MYOM2P54296 1465 aa30.12■■■□□ 2.41
TOP3A-204ENST00000472959 CPS1P31327 1500 aa30.12■■■□□ 2.41
TOP3A-204ENST00000472959 DCAF11Q8TEB1 546 aa30.12■■■□□ 2.41
TOP3A-204ENST00000472959 NEUROD1Q13562 356 aa30.11■■■□□ 2.41
TOP3A-204ENST00000472959 NRXN3Q9Y4C0 1643 aa30.11■■■□□ 2.41
TOP3A-204ENST00000472959 IFT172Q9UG01 1749 aa30.1■■■□□ 2.41
TOP3A-204ENST00000472959 NRXN1Q9ULB1 1477 aa30.08■■■□□ 2.41
TOP3A-204ENST00000472959 PIK3C2GO75747 1445 aa30.08■■■□□ 2.41
TOP3A-204ENST00000472959 KDM2AQ9Y2K7 1162 aa30.07■■■□□ 2.4
TOP3A-204ENST00000472959 METP08581 1390 aa30.05■■■□□ 2.4
TOP3A-204ENST00000472959 ALKQ9UM73 1620 aa30.04■■■□□ 2.4
TOP3A-204ENST00000472959 CLSPNQ9HAW4 1339 aa30.04■■■□□ 2.4
TOP3A-204ENST00000472959 FBXO41Q8TF61 875 aa30.03■■■□□ 2.4
TOP3A-204ENST00000472959 C14orf93Q9H972 538 aaKnown RBP30.03■■■□□ 2.4
TOP3A-204ENST00000472959 AMOTL2Q9Y2J4 779 aa30.02■■■□□ 2.4
TOP3A-204ENST00000472959 NWD1Q149M9 1564 aa30.02■■■□□ 2.4
TOP3A-204ENST00000472959 NKTRP30414 1462 aaKnown RBP30.01■■■□□ 2.4
TOP3A-204ENST00000472959 IQSEC2Q5JU85 1478 aa30.01■■■□□ 2.4
TOP3A-204ENST00000472959 L3MBTL2Q969R5 705 aa30.01■■■□□ 2.39
TOP3A-204ENST00000472959 STRCP1A6NGW2 1772 aa30■■■□□ 2.39
TOP3A-204ENST00000472959 PTPRUQ92729 1446 aa29.99■■■□□ 2.39
TOP3A-204ENST00000472959 PROSER2Q86WR7 435 aaPredicted RBP29.99■■■□□ 2.39
TOP3A-204ENST00000472959 LRRC7Q96NW7 1537 aa29.99■■■□□ 2.39
TOP3A-204ENST00000472959 CHD2O14647 1828 aaKnown RBP29.98■■■□□ 2.39
TOP3A-204ENST00000472959 CFAP70Q5T0N1 1121 aa29.96■■■□□ 2.39
TOP3A-204ENST00000472959 CCER1Q8TC90 406 aaPredicted RBP29.96■■■□□ 2.39
TOP3A-204ENST00000472959 TMEM94Q12767 1356 aa29.93■■■□□ 2.38
TOP3A-204ENST00000472959 SETD1AO15047 1707 aaKnown RBP29.93■■■□□ 2.38
TOP3A-204ENST00000472959 TONSLQ96HA7 1378 aa29.92■■■□□ 2.38
TOP3A-204ENST00000472959 TMEM132EQ6IEE7 984 aa29.9■■■□□ 2.38
TOP3A-204ENST00000472959 LAMC1P11047 1609 aa29.89■■■□□ 2.38
TOP3A-204ENST00000472959 PRAG1Q86YV5 1406 aa29.89■■■□□ 2.38
TOP3A-204ENST00000472959 NCOA3Q9Y6Q9 1424 aa29.89■■■□□ 2.38
TOP3A-204ENST00000472959 XRN1Q8IZH2 1706 aaKnown RBP29.89■■■□□ 2.38
TOP3A-204ENST00000472959 LRPPRCP42704 1394 aaKnown RBP29.89■■■□□ 2.37
TOP3A-204ENST00000472959 ABCC11Q96J66 1382 aa29.87■■■□□ 2.37
TOP3A-204ENST00000472959 RBM33Q96EV2 1170 aaKnown RBP29.85■■■□□ 2.37
TOP3A-204ENST00000472959 PTCH1Q13635 1447 aa29.85■■■□□ 2.37
TOP3A-204ENST00000472959 YTHDC2Q9H6S0 1430 aaKnown RBP29.85■■■□□ 2.37
TOP3A-204ENST00000472959 ASXL1Q8IXJ9 1541 aa29.85■■■□□ 2.37
TOP3A-204ENST00000472959 STK26Q9P289 416 aa29.84■■■□□ 2.37
TOP3A-204ENST00000472959 TIMELESSQ9UNS1 1208 aa29.84■■■□□ 2.37
TOP3A-204ENST00000472959 TECPR2O15040 1411 aa29.83■■■□□ 2.37
TOP3A-204ENST00000472959 ROBO2Q9HCK4 1378 aa29.82■■■□□ 2.36
TOP3A-204ENST00000472959 C14orf37Q86TY3 774 aa29.81■■■□□ 2.36
TOP3A-204ENST00000472959 SIRT1Q96EB6 747 aa29.81■■■□□ 2.36
TOP3A-204ENST00000472959 UBAP1LF5GYI3 381 aa29.8■■■□□ 2.36
TOP3A-204ENST00000472959 TOM1O60784 492 aa29.8■■■□□ 2.36
TOP3A-204ENST00000472959 ADGRB1O14514 1584 aa29.8■■■□□ 2.36
TOP3A-204ENST00000472959 MSH6P52701 1360 aa29.79■■■□□ 2.36
TOP3A-204ENST00000472959 C19orf44Q9H6X5 657 aa29.79■■■□□ 2.36
TOP3A-204ENST00000472959 FAM135BQ49AJ0 1406 aa29.75■■■□□ 2.35
TOP3A-204ENST00000472959 KIAA1210Q9ULL0 1709 aa29.75■■■□□ 2.35
TOP3A-204ENST00000472959 XIRP1Q702N8 1843 aaKnown RBP29.75■■■□□ 2.35
TOP3A-204ENST00000472959 NBPF1Q3BBV0 1214 aa29.74■■■□□ 2.35
TOP3A-204ENST00000472959 NBPF8Q3BBV2 869 aa29.72■■■□□ 2.35
TOP3A-204ENST00000472959 WAPLQ7Z5K2 1190 aa29.71■■■□□ 2.35
TOP3A-204ENST00000472959 TRAK1Q9UPV9 953 aa29.71■■■□□ 2.35
TOP3A-204ENST00000472959 KNDC1Q76NI1 1749 aa29.71■■■□□ 2.35
TOP3A-204ENST00000472959 ADGRL3Q9HAR2 1447 aa29.71■■■□□ 2.35
TOP3A-204ENST00000472959 ATF3P18847 181 aa29.7■■■□□ 2.35
TOP3A-204ENST00000472959 CADPS2Q86UW7 1296 aa29.7■■■□□ 2.35
TOP3A-204ENST00000472959 DLC1Q96QB1 1528 aa29.7■■■□□ 2.34
TOP3A-204ENST00000472959 DCCP43146 1447 aa29.68■■■□□ 2.34
TOP3A-204ENST00000472959 PRAM1Q96QH2 718 aa29.67■■■□□ 2.34
TOP3A-204ENST00000472959 POGKQ9P215 609 aa29.67■■■□□ 2.34
TOP3A-204ENST00000472959 ROCK2O75116 1388 aaKnown RBP29.65■■■□□ 2.34
TOP3A-204ENST00000472959 PLEKHH1Q9ULM0 1364 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms