RNA–Protein interactions for RNA: ENST00000472768.5

GPSM3-208, Transcript of G protein signaling modulator 3, human

TSL 2

Gene GPSM3, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPSM3-208	ENST00000472768	TET3	O43151	1660 aa		28.13	■■■□□ 2.09
GPSM3-208	ENST00000472768	PPP1R15A	O75807	674 aa	Predicted RBP	28.11	■■■□□ 2.09
GPSM3-208	ENST00000472768	MSH6	P52701	1360 aa		28.1	■■■□□ 2.09
GPSM3-208	ENST00000472768	NWD1	Q149M9	1564 aa		28.09	■■■□□ 2.09
GPSM3-208	ENST00000472768	ROBO1	Q9Y6N7	1651 aa		28.06	■■■□□ 2.08
GPSM3-208	ENST00000472768	PLEKHG1	Q9ULL1	1385 aa		28.05	■■■□□ 2.08
GPSM3-208	ENST00000472768	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.04	■■■□□ 2.08
GPSM3-208	ENST00000472768	GCC2	Q8IWJ2	1684 aa		28.03	■■■□□ 2.08
GPSM3-208	ENST00000472768	RIMS2	Q9UQ26	1411 aa		28.02	■■■□□ 2.08
GPSM3-208	ENST00000472768	ZFYVE9	O95405	1425 aa		28.01	■■■□□ 2.07
GPSM3-208	ENST00000472768	RBM33	Q96EV2	1170 aa	Known RBP	28	■■■□□ 2.07
GPSM3-208	ENST00000472768	UNC13B	O14795	1591 aa		27.99	■■■□□ 2.07
GPSM3-208	ENST00000472768	CHGA	P10645	457 aa	Known RBP	27.99	■■■□□ 2.07
GPSM3-208	ENST00000472768	SLAIN2	Q9P270	581 aa		27.97	■■■□□ 2.07
GPSM3-208	ENST00000472768	TMEM131L	A2VDJ0	1609 aa		27.97	■■■□□ 2.07
GPSM3-208	ENST00000472768	MYO5B	Q9ULV0	1848 aa		27.97	■■■□□ 2.07
GPSM3-208	ENST00000472768	RGS17	Q9UGC6	210 aa	Predicted RBP	27.96	■■■□□ 2.07
GPSM3-208	ENST00000472768	CHD2	O14647	1828 aa	Known RBP	27.96	■■■□□ 2.07
GPSM3-208	ENST00000472768	NCOA3	Q9Y6Q9	1424 aa		27.96	■■■□□ 2.07
GPSM3-208	ENST00000472768	TBX22	Q9Y458	520 aa		27.95	■■■□□ 2.07
GPSM3-208	ENST00000472768	ROCK1	Q13464	1354 aa		27.94	■■■□□ 2.06
GPSM3-208	ENST00000472768	C14orf37	Q86TY3	774 aa		27.94	■■■□□ 2.06
GPSM3-208	ENST00000472768	DIP2A	Q14689	1571 aa		27.92	■■■□□ 2.06
GPSM3-208	ENST00000472768	PHLPP1	O60346	1717 aa		27.92	■■■□□ 2.06
GPSM3-208	ENST00000472768	JCAD	Q9P266	1359 aa		27.91	■■■□□ 2.06
GPSM3-208	ENST00000472768	PIK3R4	Q99570	1358 aa		27.89	■■■□□ 2.06
GPSM3-208	ENST00000472768	IQGAP3	Q86VI3	1631 aa		27.88	■■■□□ 2.05
GPSM3-208	ENST00000472768		E9PCH4	1651 aa		27.88	■■■□□ 2.05
GPSM3-208	ENST00000472768	CADPS2	Q86UW7	1296 aa		27.86	■■■□□ 2.05
GPSM3-208	ENST00000472768	ATF3	P18847	181 aa		27.84	■■■□□ 2.05
GPSM3-208	ENST00000472768	NUP155	O75694	1391 aa		27.84	■■■□□ 2.05
GPSM3-208	ENST00000472768	POTEA	Q6S8J7	498 aa		27.84	■■■□□ 2.05
GPSM3-208	ENST00000472768	TRPM2	O94759	1503 aa		27.83	■■■□□ 2.05
GPSM3-208	ENST00000472768	C19orf44	Q9H6X5	657 aa		27.83	■■■□□ 2.05
GPSM3-208	ENST00000472768	ADAMTS13	Q76LX8	1427 aa		27.82	■■■□□ 2.04
GPSM3-208	ENST00000472768	NUTM2D	Q5VT03	806 aa	Predicted RBP	27.81	■■■□□ 2.04
GPSM3-208	ENST00000472768	SPATA31A6	Q5VVP1	1343 aa		27.79	■■■□□ 2.04
GPSM3-208	ENST00000472768	ITGAE	P38570	1179 aa		27.77	■■■□□ 2.04
GPSM3-208	ENST00000472768	MEX3C	Q5U5Q3	659 aa	Known RBP	27.77	■■■□□ 2.04
GPSM3-208	ENST00000472768	COL16A1	Q07092	1604 aa	Predicted RBP	27.77	■■■□□ 2.04
GPSM3-208	ENST00000472768	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	27.76	■■■□□ 2.03
GPSM3-208	ENST00000472768	AMOTL2	Q9Y2J4	779 aa		27.75	■■■□□ 2.03
GPSM3-208	ENST00000472768	AHDC1	Q5TGY3	1603 aa	Predicted RBP	27.74	■■■□□ 2.03
GPSM3-208	ENST00000472768	DCC	P43146	1447 aa		27.72	■■■□□ 2.03
GPSM3-208	ENST00000472768	ZNF326	Q5BKZ1	582 aa	Known RBP	27.71	■■■□□ 2.03
GPSM3-208	ENST00000472768	ZNF772	Q68DY9	489 aa	Predicted RBP	27.71	■■■□□ 2.03
GPSM3-208	ENST00000472768	SPHKAP	Q2M3C7	1700 aa		27.7	■■■□□ 2.02
GPSM3-208	ENST00000472768	SHPRH	Q149N8	1683 aa		27.68	■■■□□ 2.02
GPSM3-208	ENST00000472768	SETBP1	Q9Y6X0	1596 aa		27.67	■■■□□ 2.02
GPSM3-208	ENST00000472768	PTPRU	Q92729	1446 aa		27.64	■■■□□ 2.02
GPSM3-208	ENST00000472768	BRINP3	Q76B58	766 aa		27.64	■■■□□ 2.02
GPSM3-208	ENST00000472768	LRP6	O75581	1613 aa		27.62	■■■□□ 2.01
GPSM3-208	ENST00000472768	XRN1	Q8IZH2	1706 aa	Known RBP	27.62	■■■□□ 2.01
GPSM3-208	ENST00000472768	SETD1A	O15047	1707 aa	Known RBP	27.6	■■■□□ 2.01
GPSM3-208	ENST00000472768	NRXN3	Q9Y4C0	1643 aa		27.6	■■■□□ 2.01
GPSM3-208	ENST00000472768	ASXL1	Q8IXJ9	1541 aa		27.58	■■■□□ 2.01
GPSM3-208	ENST00000472768	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.55	■■■□□ 2
GPSM3-208	ENST00000472768	NUTM2E	B1AL46	878 aa	Predicted RBP	27.55	■■■□□ 2
GPSM3-208	ENST00000472768	NUTM2A	Q8IVF1	878 aa	Predicted RBP	27.55	■■■□□ 2
GPSM3-208	ENST00000472768	LRRC59	Q96AG4	307 aa	Known RBP	27.55	■■■□□ 2
GPSM3-208	ENST00000472768	MST1R	Q04912	1400 aa		27.55	■■■□□ 2
GPSM3-208	ENST00000472768	SETD5	Q9C0A6	1442 aa		27.54	■■■□□ 2
GPSM3-208	ENST00000472768	ADGRL3	Q9HAR2	1447 aa		27.54	■■■□□ 2
GPSM3-208	ENST00000472768	MET	P08581	1390 aa		27.54	■■■□□ 2
GPSM3-208	ENST00000472768	KIF1B	O60333	1816 aa		27.54	■■■□□ 2
GPSM3-208	ENST00000472768	RXRB	P28702	533 aa		27.53	■■■□□ 2
GPSM3-208	ENST00000472768	PPARGC1B	Q86YN6	1023 aa	Known RBP	27.53	■■■□□ 2
GPSM3-208	ENST00000472768	TRIM52	Q96A61	297 aa		27.52	■■■□□ 2
GPSM3-208	ENST00000472768	CLTCL1	P53675	1640 aa		27.52	■■■□□ 2
GPSM3-208	ENST00000472768	NEXMIF	Q5QGS0	1516 aa		27.51	■■■□□ 2
GPSM3-208	ENST00000472768	NHSL1	Q5SYE7	1610 aa		27.51	■■□□□ 1.99
GPSM3-208	ENST00000472768	VGF	O15240	615 aa	Predicted RBP	27.49	■■□□□ 1.99
GPSM3-208	ENST00000472768	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.46	■■□□□ 1.99
GPSM3-208	ENST00000472768	AFF2	P51816	1311 aa		27.46	■■□□□ 1.99
GPSM3-208	ENST00000472768	RRBP1	Q9P2E9	1410 aa	Known RBP	27.45	■■□□□ 1.99
GPSM3-208	ENST00000472768	NALCN	Q8IZF0	1738 aa		27.44	■■□□□ 1.98
GPSM3-208	ENST00000472768	NAIP	Q13075	1403 aa		27.44	■■□□□ 1.98
GPSM3-208	ENST00000472768	PTCH1	Q13635	1447 aa		27.44	■■□□□ 1.98
GPSM3-208	ENST00000472768	UPF1	Q92900	1129 aa	Known RBP eCLIP	27.43	■■□□□ 1.98	1e-7	■■■■□ 21.1
GPSM3-208	ENST00000472768	RPGRIP1L	Q68CZ1	1315 aa		27.42	■■□□□ 1.98
GPSM3-208	ENST00000472768	C8orf37	Q96NL8	207 aa		27.41	■■□□□ 1.98
GPSM3-208	ENST00000472768	PNPLA6	Q8IY17	1366 aa		27.4	■■□□□ 1.98
GPSM3-208	ENST00000472768	C1orf167	Q5SNV9	1468 aa		27.39	■■□□□ 1.97
GPSM3-208	ENST00000472768	SLC4A1AP	Q9BWU0	796 aa	Known RBP	27.36	■■□□□ 1.97
GPSM3-208	ENST00000472768	RBM6	P78332	1123 aa	Known RBP	27.35	■■□□□ 1.97
GPSM3-208	ENST00000472768	HFM1	A2PYH4	1435 aa		27.35	■■□□□ 1.97
GPSM3-208	ENST00000472768	DDX17	Q92841	729 aa	Known RBP	27.34	■■□□□ 1.97
GPSM3-208	ENST00000472768	QTRT2	Q9H974	415 aa	Known RBP	27.33	■■□□□ 1.97
GPSM3-208	ENST00000472768	PRAG1	Q86YV5	1406 aa		27.33	■■□□□ 1.97
GPSM3-208	ENST00000472768	NGLY1	Q96IV0	654 aa		27.33	■■□□□ 1.96
GPSM3-208	ENST00000472768	LAMC1	P11047	1609 aa		27.32	■■□□□ 1.96
GPSM3-208	ENST00000472768	ROBO2	Q9HCK4	1378 aa		27.31	■■□□□ 1.96
GPSM3-208	ENST00000472768	ADAMTS2	O95450	1211 aa		27.29	■■□□□ 1.96
GPSM3-208	ENST00000472768	SOS2	Q07890	1332 aa	Predicted RBP	27.28	■■□□□ 1.96
GPSM3-208	ENST00000472768	PPL	O60437	1756 aa		27.28	■■□□□ 1.96
GPSM3-208	ENST00000472768	ORAI2	Q96SN7	254 aa		27.26	■■□□□ 1.95
GPSM3-208	ENST00000472768	RGS12	O14924	1447 aa		27.26	■■□□□ 1.95
GPSM3-208	ENST00000472768	NPHP3	Q7Z494	1330 aa		27.24	■■□□□ 1.95
GPSM3-208	ENST00000472768	USP21	Q9UK80	565 aa		27.23	■■□□□ 1.95
GPSM3-208	ENST00000472768	TRPC5	Q9UL62	973 aa	Predicted RBP	27.23	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms