RNA–Protein interactions for RNA: ENST00000472622.5

TMEM254-210, Transcript of transmembrane protein 254, humanhuman

TSL 2

Gene TMEM254, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-210ENST00000472622 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.08■■□□□ 1.13
TMEM254-210ENST00000472622 BCANQ96GW7 911 aa22.08■■□□□ 1.13
TMEM254-210ENST00000472622 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
TMEM254-210ENST00000472622 PROSER2Q86WR7 435 aaPredicted RBP22.07■■□□□ 1.12
TMEM254-210ENST00000472622 FAM135BQ49AJ0 1406 aa22.06■■□□□ 1.12
TMEM254-210ENST00000472622 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
TMEM254-210ENST00000472622 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
TMEM254-210ENST00000472622 NWD1Q149M9 1564 aa22.05■■□□□ 1.12
TMEM254-210ENST00000472622 NUP155O75694 1391 aa22.05■■□□□ 1.12
TMEM254-210ENST00000472622 XIRP1Q702N8 1843 aaKnown RBP22.05■■□□□ 1.12
TMEM254-210ENST00000472622 TMEM131LA2VDJ0 1609 aa22.05■■□□□ 1.12
TMEM254-210ENST00000472622 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
TMEM254-210ENST00000472622 E9PCH4 1651 aa22.02■■□□□ 1.12
TMEM254-210ENST00000472622 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
TMEM254-210ENST00000472622 CHGAP10645 457 aaKnown RBP22.01■■□□□ 1.11
TMEM254-210ENST00000472622 ITGAEP38570 1179 aa22.01■■□□□ 1.11
TMEM254-210ENST00000472622 MSH6P52701 1360 aa21.99■■□□□ 1.11
TMEM254-210ENST00000472622 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
TMEM254-210ENST00000472622 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
TMEM254-210ENST00000472622 PIK3R4Q99570 1358 aa21.97■■□□□ 1.11
TMEM254-210ENST00000472622 MYO5BQ9ULV0 1848 aa21.96■■□□□ 1.11
TMEM254-210ENST00000472622 DIP2AQ14689 1571 aa21.95■■□□□ 1.11
TMEM254-210ENST00000472622 PPARGC1BQ86YN6 1023 aaKnown RBP21.95■■□□□ 1.1
TMEM254-210ENST00000472622 RRBP1Q9P2E9 1410 aaKnown RBP21.94■■□□□ 1.1
TMEM254-210ENST00000472622 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
TMEM254-210ENST00000472622 ADAMTS13Q76LX8 1427 aa21.93■■□□□ 1.1
TMEM254-210ENST00000472622 RBM33Q96EV2 1170 aaKnown RBP21.93■■□□□ 1.1
TMEM254-210ENST00000472622 SLAIN2Q9P270 581 aa21.93■■□□□ 1.1
TMEM254-210ENST00000472622 ROBO1Q9Y6N7 1651 aa21.9■■□□□ 1.1
TMEM254-210ENST00000472622 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
TMEM254-210ENST00000472622 TRPM2O94759 1503 aa21.87■■□□□ 1.09
TMEM254-210ENST00000472622 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
TMEM254-210ENST00000472622 C14orf37Q86TY3 774 aa21.85■■□□□ 1.09
TMEM254-210ENST00000472622 CADPS2Q86UW7 1296 aa21.85■■□□□ 1.09
TMEM254-210ENST00000472622 NAIPQ13075 1403 aa21.85■■□□□ 1.09
TMEM254-210ENST00000472622 SPHKAPQ2M3C7 1700 aa21.85■■□□□ 1.09
TMEM254-210ENST00000472622 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
TMEM254-210ENST00000472622 ATF3P18847 181 aa21.82■■□□□ 1.08
TMEM254-210ENST00000472622 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
TMEM254-210ENST00000472622 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
TMEM254-210ENST00000472622 JCADQ9P266 1359 aa21.8■■□□□ 1.08
TMEM254-210ENST00000472622 HFM1A2PYH4 1435 aa21.8■■□□□ 1.08
TMEM254-210ENST00000472622 RGS17Q9UGC6 210 aaPredicted RBP21.79■■□□□ 1.08
TMEM254-210ENST00000472622 DCCP43146 1447 aa21.78■■□□□ 1.08
TMEM254-210ENST00000472622 PTPRUQ92729 1446 aa21.78■■□□□ 1.08
TMEM254-210ENST00000472622 PHLPP1O60346 1717 aa21.76■■□□□ 1.07
TMEM254-210ENST00000472622 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.75■■□□□ 1.07
TMEM254-210ENST00000472622 NRXN3Q9Y4C0 1643 aa21.75■■□□□ 1.07
TMEM254-210ENST00000472622 CLTCL1P53675 1640 aa21.74■■□□□ 1.07
TMEM254-210ENST00000472622 XRN1Q8IZH2 1706 aaKnown RBP21.73■■□□□ 1.07
TMEM254-210ENST00000472622 TRIM52Q96A61 297 aa21.73■■□□□ 1.07
TMEM254-210ENST00000472622 NEXMIFQ5QGS0 1516 aa21.73■■□□□ 1.07
TMEM254-210ENST00000472622 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
TMEM254-210ENST00000472622 SPATA31A6Q5VVP1 1343 aa21.72■■□□□ 1.07
TMEM254-210ENST00000472622 COL16A1Q07092 1604 aaPredicted RBP21.72■■□□□ 1.07
TMEM254-210ENST00000472622 AHDC1Q5TGY3 1603 aaPredicted RBP21.72■■□□□ 1.07
TMEM254-210ENST00000472622 METP08581 1390 aa21.72■■□□□ 1.07
TMEM254-210ENST00000472622 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
TMEM254-210ENST00000472622 RPGRIP1LQ68CZ1 1315 aa21.71■■□□□ 1.07
TMEM254-210ENST00000472622 KIF1BO60333 1816 aa21.69■■□□□ 1.06
TMEM254-210ENST00000472622 BRINP3Q76B58 766 aa21.68■■□□□ 1.06
TMEM254-210ENST00000472622 POTEAQ6S8J7 498 aa21.67■■□□□ 1.06
TMEM254-210ENST00000472622 ADGRL3Q9HAR2 1447 aa21.66■■□□□ 1.06
TMEM254-210ENST00000472622 MST1RQ04912 1400 aa21.64■■□□□ 1.06
TMEM254-210ENST00000472622 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
TMEM254-210ENST00000472622 PTCH1Q13635 1447 aa21.63■■□□□ 1.05
TMEM254-210ENST00000472622 ASXL1Q8IXJ9 1541 aa21.62■■□□□ 1.05
TMEM254-210ENST00000472622 PRAG1Q86YV5 1406 aa21.62■■□□□ 1.05
TMEM254-210ENST00000472622 SHPRHQ149N8 1683 aa21.61■■□□□ 1.05
TMEM254-210ENST00000472622 MEX3CQ5U5Q3 659 aaKnown RBP21.6■■□□□ 1.05
TMEM254-210ENST00000472622 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
TMEM254-210ENST00000472622 ZNF772Q68DY9 489 aaPredicted RBP21.59■■□□□ 1.05
TMEM254-210ENST00000472622 LRRC59Q96AG4 307 aaKnown RBP21.58■■□□□ 1.05
TMEM254-210ENST00000472622 LRP6O75581 1613 aa21.58■■□□□ 1.04
TMEM254-210ENST00000472622 CCDC144AA2RUR9 1427 aa21.56■■□□□ 1.04
TMEM254-210ENST00000472622 NHSL1Q5SYE7 1610 aa21.55■■□□□ 1.04
TMEM254-210ENST00000472622 ROBO2Q9HCK4 1378 aa21.54■■□□□ 1.04
TMEM254-210ENST00000472622 SETD1AO15047 1707 aaKnown RBP21.54■■□□□ 1.04
TMEM254-210ENST00000472622 NALCNQ8IZF0 1738 aa21.54■■□□□ 1.04
TMEM254-210ENST00000472622 ANKRD30BQ9BXX2 1392 aa21.53■■□□□ 1.04
TMEM254-210ENST00000472622 MPHOSPH9Q99550 1183 aa21.53■■□□□ 1.04
TMEM254-210ENST00000472622 PPLO60437 1756 aa21.53■■□□□ 1.04
TMEM254-210ENST00000472622 C1orf167Q5SNV9 1468 aa21.52■■□□□ 1.04
TMEM254-210ENST00000472622 FOXD1Q16676 465 aa21.51■■□□□ 1.03
TMEM254-210ENST00000472622 SPATA31E1Q6ZUB1 1445 aa21.5■■□□□ 1.03
TMEM254-210ENST00000472622 NUTM2BA6NNL0 878 aaPredicted RBP21.49■■□□□ 1.03
TMEM254-210ENST00000472622 NUTM2EB1AL46 878 aaPredicted RBP21.49■■□□□ 1.03
TMEM254-210ENST00000472622 NUTM2AQ8IVF1 878 aaPredicted RBP21.49■■□□□ 1.03
TMEM254-210ENST00000472622 ADGRF5Q8IZF2 1346 aa21.47■■□□□ 1.03
TMEM254-210ENST00000472622 LAMC1P11047 1609 aa21.47■■□□□ 1.03
TMEM254-210ENST00000472622 PNPLA6Q8IY17 1366 aa21.47■■□□□ 1.03
TMEM254-210ENST00000472622 RGL3Q3MIN7 710 aa21.46■■□□□ 1.03
TMEM254-210ENST00000472622 SOS2Q07890 1332 aaPredicted RBP21.45■■□□□ 1.02
TMEM254-210ENST00000472622 TECPR2O15040 1411 aa21.45■■□□□ 1.02
TMEM254-210ENST00000472622 RXRBP28702 533 aa21.44■■□□□ 1.02
TMEM254-210ENST00000472622 DDX17Q92841 729 aaKnown RBP21.44■■□□□ 1.02
TMEM254-210ENST00000472622 ORAI2Q96SN7 254 aa21.43■■□□□ 1.02
TMEM254-210ENST00000472622 AFF2P51816 1311 aa21.43■■□□□ 1.02
TMEM254-210ENST00000472622 LRPPRCP42704 1394 aaKnown RBP21.43■■□□□ 1.02
TMEM254-210ENST00000472622 ABCC11Q96J66 1382 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms