RNA–Protein interactions for RNA: ENST00000472381.5

RPUSD3-213, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-213ENST00000472381 BCANQ96GW7 911 aa30.77■■■□□ 2.52
RPUSD3-213ENST00000472381 KCNA6P17658 529 aa30.76■■■□□ 2.51
RPUSD3-213ENST00000472381 TMEM131LA2VDJ0 1609 aa30.75■■■□□ 2.51
RPUSD3-213ENST00000472381 SENP3Q9H4L4 574 aaPredicted RBP30.74■■■□□ 2.51
RPUSD3-213ENST00000472381 ZFYVE9O95405 1425 aa30.73■■■□□ 2.51
RPUSD3-213ENST00000472381 HDGFP51858 240 aaKnown RBP30.73■■■□□ 2.51
RPUSD3-213ENST00000472381 TMEM94Q12767 1356 aa30.72■■■□□ 2.51
RPUSD3-213ENST00000472381 PPP1R15AO75807 674 aaPredicted RBP30.72■■■□□ 2.51
RPUSD3-213ENST00000472381 RIMS2Q9UQ26 1411 aa30.72■■■□□ 2.51
RPUSD3-213ENST00000472381 NUP155O75694 1391 aa30.71■■■□□ 2.51
RPUSD3-213ENST00000472381 NWD1Q149M9 1564 aa30.7■■■□□ 2.5
RPUSD3-213ENST00000472381 NKTRP30414 1462 aaKnown RBP30.7■■■□□ 2.5
RPUSD3-213ENST00000472381 PLEKHG1Q9ULL1 1385 aa30.69■■■□□ 2.5
RPUSD3-213ENST00000472381 CHGAP10645 457 aaKnown RBP30.69■■■□□ 2.5
RPUSD3-213ENST00000472381 PROSER2Q86WR7 435 aaPredicted RBP30.69■■■□□ 2.5
RPUSD3-213ENST00000472381 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.64■■■□□ 2.5
RPUSD3-213ENST00000472381 RBM33Q96EV2 1170 aaKnown RBP30.62■■■□□ 2.49
RPUSD3-213ENST00000472381 CHD2O14647 1828 aaKnown RBP30.61■■■□□ 2.49
RPUSD3-213ENST00000472381 FAM135BQ49AJ0 1406 aa30.6■■■□□ 2.49
RPUSD3-213ENST00000472381 PHF23Q9BUL5 403 aaPredicted RBP30.6■■■□□ 2.49
RPUSD3-213ENST00000472381 MSH6P52701 1360 aa30.57■■■□□ 2.48
RPUSD3-213ENST00000472381 TBX22Q9Y458 520 aa30.57■■■□□ 2.48
RPUSD3-213ENST00000472381 SPHKAPQ2M3C7 1700 aa30.56■■■□□ 2.48
RPUSD3-213ENST00000472381 RRBP1Q9P2E9 1410 aaKnown RBP30.56■■■□□ 2.48
RPUSD3-213ENST00000472381 NUTM2DQ5VT03 806 aaPredicted RBP30.55■■■□□ 2.48
RPUSD3-213ENST00000472381 ROBO1Q9Y6N7 1651 aa30.55■■■□□ 2.48
RPUSD3-213ENST00000472381 DIP2AQ14689 1571 aa30.54■■■□□ 2.48
RPUSD3-213ENST00000472381 ADAMTS13Q76LX8 1427 aa30.52■■■□□ 2.48
RPUSD3-213ENST00000472381 PIK3R4Q99570 1358 aa30.48■■■□□ 2.47
RPUSD3-213ENST00000472381 TRPM2O94759 1503 aa30.46■■■□□ 2.47
RPUSD3-213ENST00000472381 SLAIN2Q9P270 581 aa30.45■■■□□ 2.47
RPUSD3-213ENST00000472381 NAIPQ13075 1403 aa30.45■■■□□ 2.46
RPUSD3-213ENST00000472381 NCOA3Q9Y6Q9 1424 aa30.45■■■□□ 2.46
RPUSD3-213ENST00000472381 C14orf37Q86TY3 774 aa30.44■■■□□ 2.46
RPUSD3-213ENST00000472381 ZNF326Q5BKZ1 582 aaKnown RBP30.41■■■□□ 2.46
RPUSD3-213ENST00000472381 CLTCL1P53675 1640 aa30.38■■■□□ 2.45
RPUSD3-213ENST00000472381 PHLPP1O60346 1717 aa30.38■■■□□ 2.45
RPUSD3-213ENST00000472381 SETBP1Q9Y6X0 1596 aa30.37■■■□□ 2.45
RPUSD3-213ENST00000472381 NRXN3Q9Y4C0 1643 aa30.36■■■□□ 2.45
RPUSD3-213ENST00000472381 AMOTL2Q9Y2J4 779 aa30.36■■■□□ 2.45
RPUSD3-213ENST00000472381 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.36■■■□□ 2.45
RPUSD3-213ENST00000472381 KIF1BO60333 1816 aa30.35■■■□□ 2.45
RPUSD3-213ENST00000472381 HFM1A2PYH4 1435 aa30.34■■■□□ 2.45
RPUSD3-213ENST00000472381 C19orf44Q9H6X5 657 aa30.34■■■□□ 2.45
RPUSD3-213ENST00000472381 PTPRUQ92729 1446 aa30.33■■■□□ 2.45
RPUSD3-213ENST00000472381 ATF3P18847 181 aa30.33■■■□□ 2.45
RPUSD3-213ENST00000472381 CADPS2Q86UW7 1296 aa30.33■■■□□ 2.45
RPUSD3-213ENST00000472381 TRIM52Q96A61 297 aa30.32■■■□□ 2.44
RPUSD3-213ENST00000472381 XRN1Q8IZH2 1706 aaKnown RBP30.3■■■□□ 2.44
RPUSD3-213ENST00000472381 NEXMIFQ5QGS0 1516 aa30.3■■■□□ 2.44
RPUSD3-213ENST00000472381 RGS17Q9UGC6 210 aaPredicted RBP30.29■■■□□ 2.44
RPUSD3-213ENST00000472381 JCADQ9P266 1359 aa30.27■■■□□ 2.44
RPUSD3-213ENST00000472381 COL16A1Q07092 1604 aaPredicted RBP30.26■■■□□ 2.44
RPUSD3-213ENST00000472381 METP08581 1390 aa30.24■■■□□ 2.43
RPUSD3-213ENST00000472381 SLC4A1APQ9BWU0 796 aaKnown RBP30.23■■■□□ 2.43
RPUSD3-213ENST00000472381 DCCP43146 1447 aa30.22■■■□□ 2.43
RPUSD3-213ENST00000472381 AHDC1Q5TGY3 1603 aaPredicted RBP30.21■■■□□ 2.43
RPUSD3-213ENST00000472381 VGFO15240 615 aaPredicted RBP30.16■■■□□ 2.42
RPUSD3-213ENST00000472381 BRINP3Q76B58 766 aa30.14■■■□□ 2.42
RPUSD3-213ENST00000472381 POTEAQ6S8J7 498 aa30.13■■■□□ 2.41
RPUSD3-213ENST00000472381 SPATA31A6Q5VVP1 1343 aa30.13■■■□□ 2.41
RPUSD3-213ENST00000472381 RPGRIP1LQ68CZ1 1315 aa30.13■■■□□ 2.41
RPUSD3-213ENST00000472381 ADGRL3Q9HAR2 1447 aa30.12■■■□□ 2.41
RPUSD3-213ENST00000472381 SHPRHQ149N8 1683 aa30.11■■■□□ 2.41
RPUSD3-213ENST00000472381 MST1RQ04912 1400 aa30.11■■■□□ 2.41
RPUSD3-213ENST00000472381 ASXL1Q8IXJ9 1541 aa30.11■■■□□ 2.41
RPUSD3-213ENST00000472381 NALCNQ8IZF0 1738 aa30.1■■■□□ 2.41
RPUSD3-213ENST00000472381 PPLO60437 1756 aa30.1■■■□□ 2.41
RPUSD3-213ENST00000472381 SETD1AO15047 1707 aaKnown RBP30.1■■■□□ 2.41
RPUSD3-213ENST00000472381 FOXD1Q16676 465 aa30.06■■■□□ 2.4
RPUSD3-213ENST00000472381 LRP6O75581 1613 aa30.06■■■□□ 2.4
RPUSD3-213ENST00000472381 PTCH1Q13635 1447 aa30.05■■■□□ 2.4
RPUSD3-213ENST00000472381 NHSL1Q5SYE7 1610 aa30.05■■■□□ 2.4
RPUSD3-213ENST00000472381 MEX3CQ5U5Q3 659 aaKnown RBP30.05■■■□□ 2.4
RPUSD3-213ENST00000472381 CCDC144AA2RUR9 1427 aa30.03■■■□□ 2.4
RPUSD3-213ENST00000472381 ROBO2Q9HCK4 1378 aa30■■■□□ 2.39
RPUSD3-213ENST00000472381 SETD5Q9C0A6 1442 aa29.99■■■□□ 2.39
RPUSD3-213ENST00000472381 MPHOSPH9Q99550 1183 aa29.99■■■□□ 2.39
RPUSD3-213ENST00000472381 PRAG1Q86YV5 1406 aa29.98■■■□□ 2.39
RPUSD3-213ENST00000472381 ZNF772Q68DY9 489 aaPredicted RBP29.95■■■□□ 2.39
RPUSD3-213ENST00000472381 LRRC59Q96AG4 307 aaKnown RBP29.95■■■□□ 2.39
RPUSD3-213ENST00000472381 C1orf167Q5SNV9 1468 aa29.94■■■□□ 2.38
RPUSD3-213ENST00000472381 NUTM2BA6NNL0 878 aaPredicted RBP29.94■■■□□ 2.38
RPUSD3-213ENST00000472381 NUTM2EB1AL46 878 aaPredicted RBP29.94■■■□□ 2.38
RPUSD3-213ENST00000472381 NUTM2AQ8IVF1 878 aaPredicted RBP29.94■■■□□ 2.38
RPUSD3-213ENST00000472381 RGL3Q3MIN7 710 aa29.93■■■□□ 2.38
RPUSD3-213ENST00000472381 SPATA31E1Q6ZUB1 1445 aa29.93■■■□□ 2.38
RPUSD3-213ENST00000472381 ACIN1Q9UKV3 1341 aaKnown RBP29.93■■■□□ 2.38
RPUSD3-213ENST00000472381 IFT172Q9UG01 1749 aa29.92■■■□□ 2.38
RPUSD3-213ENST00000472381 DDX17Q92841 729 aaKnown RBP29.91■■■□□ 2.38
RPUSD3-213ENST00000472381 ANKRD30BQ9BXX2 1392 aa29.9■■■□□ 2.38
RPUSD3-213ENST00000472381 ADGRF5Q8IZF2 1346 aa29.9■■■□□ 2.38
RPUSD3-213ENST00000472381 LAMC1P11047 1609 aa29.87■■■□□ 2.37
RPUSD3-213ENST00000472381 PNPLA6Q8IY17 1366 aa29.86■■■□□ 2.37
RPUSD3-213ENST00000472381 ORAI2Q96SN7 254 aa29.84■■■□□ 2.37
RPUSD3-213ENST00000472381 CDC42BPGQ6DT37 1551 aa29.83■■■□□ 2.37
RPUSD3-213ENST00000472381 TECPR2O15040 1411 aa29.8■■■□□ 2.36
RPUSD3-213ENST00000472381 PIK3C2GO75747 1445 aa29.8■■■□□ 2.36
RPUSD3-213ENST00000472381 AFF2P51816 1311 aa29.8■■■□□ 2.36
RPUSD3-213ENST00000472381 STK26Q9P289 416 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms