RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 CLCN1P35523 988 aa8.72□□□□□ -1.01
MDM2-216ENST00000471946 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
MDM2-216ENST00000471946 PARP9Q8IXQ6 854 aa8.72□□□□□ -1.01
MDM2-216ENST00000471946 ZFRQ96KR1 1074 aaKnown RBP8.72□□□□□ -1.01
MDM2-216ENST00000471946 TMEM134Q9H6X4 195 aa8.72□□□□□ -1.01
MDM2-216ENST00000471946 DAXXQ9UER7 740 aaPredicted RBP8.72□□□□□ -1.01
MDM2-216ENST00000471946 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
MDM2-216ENST00000471946 SWT1Q5T5J6 900 aaKnown RBP8.71□□□□□ -1.02
MDM2-216ENST00000471946 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
MDM2-216ENST00000471946 GPCPD1Q9NPB8 672 aa8.71□□□□□ -1.02
MDM2-216ENST00000471946 GOLGA8CPA6NN73 597 aa8.7□□□□□ -1.02
MDM2-216ENST00000471946 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
MDM2-216ENST00000471946 SAMD7Q7Z3H4 446 aa8.7□□□□□ -1.02
MDM2-216ENST00000471946 MS4A1P11836 297 aa8.68□□□□□ -1.02
MDM2-216ENST00000471946 FAM217BQ9NTX9 383 aaPredicted RBP8.68□□□□□ -1.02
MDM2-216ENST00000471946 DDX11L8A8MPP1 907 aa8.67□□□□□ -1.02
MDM2-216ENST00000471946 IL27Q8NEV9 243 aa8.66□□□□□ -1.02
MDM2-216ENST00000471946 WNT2BQ93097 391 aa8.66□□□□□ -1.02
MDM2-216ENST00000471946 FAM117AQ9C073 453 aa8.66□□□□□ -1.02
MDM2-216ENST00000471946 SLC10A3P09131 477 aa8.64□□□□□ -1.03
MDM2-216ENST00000471946 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.64□□□□□ -1.03
MDM2-216ENST00000471946 SOWAHBA6NEL2 793 aa8.63□□□□□ -1.03
MDM2-216ENST00000471946 BCAMP50895 628 aa8.63□□□□□ -1.03
MDM2-216ENST00000471946 ANKK1Q8NFD2 765 aa8.63□□□□□ -1.03
MDM2-216ENST00000471946 KCTD12Q96CX2 325 aaKnown RBP8.63□□□□□ -1.03
MDM2-216ENST00000471946 LRCH3Q96II8 777 aa8.63□□□□□ -1.03
MDM2-216ENST00000471946 RNF40O75150 1001 aa8.62□□□□□ -1.03
MDM2-216ENST00000471946 CD46P15529 392 aa8.62□□□□□ -1.03
MDM2-216ENST00000471946 SULF1Q8IWU6 871 aa8.62□□□□□ -1.03
MDM2-216ENST00000471946 SLF2Q8IX21 1173 aa8.62□□□□□ -1.03
MDM2-216ENST00000471946 RDH13Q8NBN7 331 aa8.62□□□□□ -1.03
MDM2-216ENST00000471946 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
MDM2-216ENST00000471946 RSPH4AQ5TD94 716 aa8.61□□□□□ -1.03
MDM2-216ENST00000471946 PLEKHG3A1L390 1219 aa8.6□□□□□ -1.03
MDM2-216ENST00000471946 SLC4A3P48751 1232 aa8.6□□□□□ -1.03
MDM2-216ENST00000471946 PPP4CP60510 307 aa8.6□□□□□ -1.03
MDM2-216ENST00000471946 HPS5Q9UPZ3 1129 aa8.59□□□□□ -1.03
MDM2-216ENST00000471946 GCGRP47871 477 aa8.58□□□□□ -1.04
MDM2-216ENST00000471946 THSD4Q6ZMP0 1018 aa8.58□□□□□ -1.04
MDM2-216ENST00000471946 DDRGK1Q96HY6 314 aa8.58□□□□□ -1.04
MDM2-216ENST00000471946 PTPN5P54829 565 aa8.57□□□□□ -1.04
MDM2-216ENST00000471946 WBP1LQ9NX94 342 aa8.57□□□□□ -1.04
MDM2-216ENST00000471946 TSR3Q9UJK0 312 aaKnown RBP8.57□□□□□ -1.04
MDM2-216ENST00000471946 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
MDM2-216ENST00000471946 SPIRE2Q8WWL2 714 aa8.55□□□□□ -1.04
MDM2-216ENST00000471946 HCSTQ9UBK5 93 aa8.55□□□□□ -1.04
MDM2-216ENST00000471946 CFHP08603 1231 aa8.54□□□□□ -1.04
MDM2-216ENST00000471946 TMEM132AQ24JP5 1023 aa8.54□□□□□ -1.04
MDM2-216ENST00000471946 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
MDM2-216ENST00000471946 KDM4AO75164 1064 aa8.53□□□□□ -1.04
MDM2-216ENST00000471946 APLP1P51693 650 aa8.53□□□□□ -1.04
MDM2-216ENST00000471946 NECTIN2Q92692 538 aa8.52□□□□□ -1.05
MDM2-216ENST00000471946 POLR3EQ9NVU0 708 aa8.52□□□□□ -1.05
MDM2-216ENST00000471946 PLA2G2EQ9NZK7 142 aa8.52□□□□□ -1.05
MDM2-216ENST00000471946 NDUFV2P19404 249 aa8.51□□□□□ -1.05
MDM2-216ENST00000471946 FUT2Q10981 343 aa8.51□□□□□ -1.05
MDM2-216ENST00000471946 KMT5BQ4FZB7 885 aa8.51□□□□□ -1.05
MDM2-216ENST00000471946 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
MDM2-216ENST00000471946 MOXD2PA6NHM9 499 aa8.5□□□□□ -1.05
MDM2-216ENST00000471946 ACTN4O43707 911 aaKnown RBP8.5□□□□□ -1.05
MDM2-216ENST00000471946 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
MDM2-216ENST00000471946 PUS10Q3MIT2 529 aaKnown RBP8.5□□□□□ -1.05
MDM2-216ENST00000471946 MYSM1Q5VVJ2 828 aa8.5□□□□□ -1.05
MDM2-216ENST00000471946 ATP6V1AP38606 617 aa8.49□□□□□ -1.05
MDM2-216ENST00000471946 SKIV2LQ15477 1246 aaKnown RBP8.49□□□□□ -1.05
MDM2-216ENST00000471946 RIC3Q7Z5B4 369 aa8.49□□□□□ -1.05
MDM2-216ENST00000471946 PROCA1Q8NCQ7 364 aaPredicted RBP8.49□□□□□ -1.05
MDM2-216ENST00000471946 HLA-CQ95604 372 aa8.49□□□□□ -1.05
MDM2-216ENST00000471946 USP46P62068 366 aa8.47□□□□□ -1.05
MDM2-216ENST00000471946 GUCA2AQ02747 115 aa8.47□□□□□ -1.05
MDM2-216ENST00000471946 PRR14Q9BWN1 585 aa8.47□□□□□ -1.05
MDM2-216ENST00000471946 ATP1B4Q9UN42 357 aaPredicted RBP8.47□□□□□ -1.05
MDM2-216ENST00000471946 PCDHB15Q9Y5E8 787 aa8.47□□□□□ -1.05
MDM2-216ENST00000471946 HOXA2O43364 376 aa8.46□□□□□ -1.06
MDM2-216ENST00000471946 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
MDM2-216ENST00000471946 SH3D19Q5HYK7 790 aa8.46□□□□□ -1.06
MDM2-216ENST00000471946 GOPCQ9HD26 462 aa8.46□□□□□ -1.06
MDM2-216ENST00000471946 LIMD1Q9UGP4 676 aa8.46□□□□□ -1.06
MDM2-216ENST00000471946 SPTLC1O15269 473 aa8.45□□□□□ -1.06
MDM2-216ENST00000471946 MORN1Q5T089 497 aa8.45□□□□□ -1.06
MDM2-216ENST00000471946 NYAP1Q6ZVC0 841 aa8.45□□□□□ -1.06
MDM2-216ENST00000471946 SCUBE3Q8IX30 993 aa8.45□□□□□ -1.06
MDM2-216ENST00000471946 PCDHGC3Q9UN70 934 aa8.45□□□□□ -1.06
MDM2-216ENST00000471946 PCDHB3Q9Y5E6 796 aa8.45□□□□□ -1.06
MDM2-216ENST00000471946 FDX1P10109 184 aa8.44□□□□□ -1.06
MDM2-216ENST00000471946 CSPP1Q1MSJ5 1256 aa8.44□□□□□ -1.06
MDM2-216ENST00000471946 RSBN1LQ6PCB5 846 aaPredicted RBP8.44□□□□□ -1.06
MDM2-216ENST00000471946 BLOC1S3Q6QNY0 202 aa8.44□□□□□ -1.06
MDM2-216ENST00000471946 PCMTD1Q96MG8 357 aaPredicted RBP8.44□□□□□ -1.06
MDM2-216ENST00000471946 SLC27A5Q9Y2P5 690 aa8.44□□□□□ -1.06
MDM2-216ENST00000471946 CLK2P49760 499 aaKnown RBP8.43□□□□□ -1.06
MDM2-216ENST00000471946 COPS2P61201 443 aa8.43□□□□□ -1.06
MDM2-216ENST00000471946 GJA5P36382 358 aa8.42□□□□□ -1.06
MDM2-216ENST00000471946 SYMPKQ92797 1274 aaKnown RBP8.42□□□□□ -1.06
MDM2-216ENST00000471946 TJAP1Q5JTD0 557 aa8.41□□□□□ -1.06
MDM2-216ENST00000471946 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
MDM2-216ENST00000471946 ZNF516Q92618 1163 aa8.41□□□□□ -1.06
MDM2-216ENST00000471946 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.41□□□□□ -1.06
MDM2-216ENST00000471946 NR1I2O75469 434 aa8.4□□□□□ -1.06
MDM2-216ENST00000471946 QPCTQ16769 361 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms