RNA–Protein interactions for RNA: ENST00000471824.6

PDE6B-207, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-207ENST00000471824 ROCK1Q13464 1354 aa14.28□□□□□ -0.12
PDE6B-207ENST00000471824 BCANQ96GW7 911 aa14.28□□□□□ -0.12
PDE6B-207ENST00000471824 PLEKHG1Q9ULL1 1385 aa14.28□□□□□ -0.12
PDE6B-207ENST00000471824 NWD1Q149M9 1564 aa14.26□□□□□ -0.13
PDE6B-207ENST00000471824 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
PDE6B-207ENST00000471824 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDE6B-207ENST00000471824 RIMS2Q9UQ26 1411 aa14.25□□□□□ -0.13
PDE6B-207ENST00000471824 MSH6P52701 1360 aa14.25□□□□□ -0.13
PDE6B-207ENST00000471824 RBM33Q96EV2 1170 aaKnown RBP14.25□□□□□ -0.13
PDE6B-207ENST00000471824 TBX22Q9Y458 520 aa14.25□□□□□ -0.13
PDE6B-207ENST00000471824 RGS17Q9UGC6 210 aaPredicted RBP14.24□□□□□ -0.13
PDE6B-207ENST00000471824 XIRP1Q702N8 1843 aaKnown RBP14.24□□□□□ -0.13
PDE6B-207ENST00000471824 SLAIN2Q9P270 581 aa14.23□□□□□ -0.13
PDE6B-207ENST00000471824 NCOA3Q9Y6Q9 1424 aa14.23□□□□□ -0.13
PDE6B-207ENST00000471824 UNC13BO14795 1591 aa14.22□□□□□ -0.13
PDE6B-207ENST00000471824 TMEM131LA2VDJ0 1609 aa14.21□□□□□ -0.13
PDE6B-207ENST00000471824 PIK3R4Q99570 1358 aa14.21□□□□□ -0.14
PDE6B-207ENST00000471824 CHGAP10645 457 aaKnown RBP14.2□□□□□ -0.14
PDE6B-207ENST00000471824 NUP155O75694 1391 aa14.2□□□□□ -0.14
PDE6B-207ENST00000471824 ADAMTS13Q76LX8 1427 aa14.19□□□□□ -0.14
PDE6B-207ENST00000471824 ROBO1Q9Y6N7 1651 aa14.19□□□□□ -0.14
PDE6B-207ENST00000471824 GCC2Q8IWJ2 1684 aa14.17□□□□□ -0.14
PDE6B-207ENST00000471824 IQGAP3Q86VI3 1631 aa14.17□□□□□ -0.14
PDE6B-207ENST00000471824 CADPS2Q86UW7 1296 aa14.16□□□□□ -0.14
PDE6B-207ENST00000471824 C19orf44Q9H6X5 657 aa14.16□□□□□ -0.14
PDE6B-207ENST00000471824 JCADQ9P266 1359 aa14.16□□□□□ -0.14
PDE6B-207ENST00000471824 DIP2AQ14689 1571 aa14.16□□□□□ -0.14
PDE6B-207ENST00000471824 E9PCH4 1651 aa14.15□□□□□ -0.14
PDE6B-207ENST00000471824 NUTM2DQ5VT03 806 aaPredicted RBP14.15□□□□□ -0.14
PDE6B-207ENST00000471824 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
PDE6B-207ENST00000471824 ITGAEP38570 1179 aa14.14□□□□□ -0.15
PDE6B-207ENST00000471824 POTEAQ6S8J7 498 aa14.14□□□□□ -0.15
PDE6B-207ENST00000471824 ATF3P18847 181 aa14.13□□□□□ -0.15
PDE6B-207ENST00000471824 AMOTL2Q9Y2J4 779 aa14.13□□□□□ -0.15
PDE6B-207ENST00000471824 CHD2O14647 1828 aaKnown RBP14.12□□□□□ -0.15
PDE6B-207ENST00000471824 TRPM2O94759 1503 aa14.11□□□□□ -0.15
PDE6B-207ENST00000471824 SPATA31A6Q5VVP1 1343 aa14.11□□□□□ -0.15
PDE6B-207ENST00000471824 DCCP43146 1447 aa14.1□□□□□ -0.15
PDE6B-207ENST00000471824 PTPRUQ92729 1446 aa14.09□□□□□ -0.15
PDE6B-207ENST00000471824 MYO5BQ9ULV0 1848 aa14.08□□□□□ -0.15
PDE6B-207ENST00000471824 ZNF326Q5BKZ1 582 aaKnown RBP14.08□□□□□ -0.16
PDE6B-207ENST00000471824 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.16
PDE6B-207ENST00000471824 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
PDE6B-207ENST00000471824 BRINP3Q76B58 766 aa14.07□□□□□ -0.16
PDE6B-207ENST00000471824 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
PDE6B-207ENST00000471824 SETBP1Q9Y6X0 1596 aa14.07□□□□□ -0.16
PDE6B-207ENST00000471824 AHDC1Q5TGY3 1603 aaPredicted RBP14.07□□□□□ -0.16
PDE6B-207ENST00000471824 RRBP1Q9P2E9 1410 aaKnown RBP14.06□□□□□ -0.16
PDE6B-207ENST00000471824 METP08581 1390 aa14.05□□□□□ -0.16
PDE6B-207ENST00000471824 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.04□□□□□ -0.16
PDE6B-207ENST00000471824 ZNF772Q68DY9 489 aaPredicted RBP14.04□□□□□ -0.16
PDE6B-207ENST00000471824 LRP6O75581 1613 aa14.04□□□□□ -0.16
PDE6B-207ENST00000471824 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
PDE6B-207ENST00000471824 NAIPQ13075 1403 aa14.03□□□□□ -0.16
PDE6B-207ENST00000471824 XRN1Q8IZH2 1706 aaKnown RBP14.02□□□□□ -0.16
PDE6B-207ENST00000471824 NRXN3Q9Y4C0 1643 aa14.02□□□□□ -0.16
PDE6B-207ENST00000471824 MST1RQ04912 1400 aa14.02□□□□□ -0.16
PDE6B-207ENST00000471824 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
PDE6B-207ENST00000471824 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
PDE6B-207ENST00000471824 ADGRL3Q9HAR2 1447 aa14.01□□□□□ -0.17
PDE6B-207ENST00000471824 ASXL1Q8IXJ9 1541 aa14□□□□□ -0.17
PDE6B-207ENST00000471824 VGFO15240 615 aaPredicted RBP14□□□□□ -0.17
PDE6B-207ENST00000471824 LRRC59Q96AG4 307 aaKnown RBP14□□□□□ -0.17
PDE6B-207ENST00000471824 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
PDE6B-207ENST00000471824 HFM1A2PYH4 1435 aa13.98□□□□□ -0.17
PDE6B-207ENST00000471824 SHPRHQ149N8 1683 aa13.98□□□□□ -0.17
PDE6B-207ENST00000471824 CLTCL1P53675 1640 aa13.98□□□□□ -0.17
PDE6B-207ENST00000471824 RPGRIP1LQ68CZ1 1315 aa13.98□□□□□ -0.17
PDE6B-207ENST00000471824 PTCH1Q13635 1447 aa13.98□□□□□ -0.17
PDE6B-207ENST00000471824 PRAG1Q86YV5 1406 aa13.97□□□□□ -0.17
PDE6B-207ENST00000471824 NUTM2BA6NNL0 878 aaPredicted RBP13.96□□□□□ -0.17
PDE6B-207ENST00000471824 NUTM2EB1AL46 878 aaPredicted RBP13.96□□□□□ -0.17
PDE6B-207ENST00000471824 RXRBP28702 533 aa13.96□□□□□ -0.17
PDE6B-207ENST00000471824 NUTM2AQ8IVF1 878 aaPredicted RBP13.96□□□□□ -0.17
PDE6B-207ENST00000471824 TRIM52Q96A61 297 aa13.96□□□□□ -0.17
PDE6B-207ENST00000471824 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
PDE6B-207ENST00000471824 PNPLA6Q8IY17 1366 aa13.94□□□□□ -0.18
PDE6B-207ENST00000471824 ROBO2Q9HCK4 1378 aa13.94□□□□□ -0.18
PDE6B-207ENST00000471824 C1orf167Q5SNV9 1468 aa13.93□□□□□ -0.18
PDE6B-207ENST00000471824 CDK12Q9NYV4 1490 aaPredicted RBP13.93□□□□□ -0.18
PDE6B-207ENST00000471824 AFF2P51816 1311 aa13.93□□□□□ -0.18
PDE6B-207ENST00000471824 DDX17Q92841 729 aaKnown RBP13.92□□□□□ -0.18
PDE6B-207ENST00000471824 UPF1Q92900 1129 aaKnown RBP eCLIP13.92□□□□□ -0.18
PDE6B-207ENST00000471824 NHSL1Q5SYE7 1610 aa13.92□□□□□ -0.18
PDE6B-207ENST00000471824 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.18
PDE6B-207ENST00000471824 C8orf37Q96NL8 207 aa13.9□□□□□ -0.18
PDE6B-207ENST00000471824 ORAI2Q96SN7 254 aa13.89□□□□□ -0.19
PDE6B-207ENST00000471824 SETD1AO15047 1707 aaKnown RBP13.89□□□□□ -0.19
PDE6B-207ENST00000471824 NALCNQ8IZF0 1738 aa13.89□□□□□ -0.19
PDE6B-207ENST00000471824 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
PDE6B-207ENST00000471824 QTRT2Q9H974 415 aaKnown RBP13.88□□□□□ -0.19
PDE6B-207ENST00000471824 KIF1BO60333 1816 aa13.87□□□□□ -0.19
PDE6B-207ENST00000471824 CCDC144AA2RUR9 1427 aa13.87□□□□□ -0.19
PDE6B-207ENST00000471824 LAMC1P11047 1609 aa13.86□□□□□ -0.19
PDE6B-207ENST00000471824 NGLY1Q96IV0 654 aa13.86□□□□□ -0.19
PDE6B-207ENST00000471824 ANKRD30BQ9BXX2 1392 aa13.85□□□□□ -0.19
PDE6B-207ENST00000471824 ADAMTS2O95450 1211 aa13.85□□□□□ -0.19
PDE6B-207ENST00000471824 FOXD1Q16676 465 aa13.85□□□□□ -0.19
PDE6B-207ENST00000471824 NPHP3Q7Z494 1330 aa13.85□□□□□ -0.19
PDE6B-207ENST00000471824 TECPR2O15040 1411 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms