RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 VGFO15240 615 aaPredicted RBP27.18■■□□□ 1.94
SNX4-203ENST00000471751 UBR1Q8IWV7 1749 aa27.18■■□□□ 1.94
SNX4-203ENST00000471751 MYOM2P54296 1465 aa27.17■■□□□ 1.94
SNX4-203ENST00000471751 ZNF326Q5BKZ1 582 aaKnown RBP27.17■■□□□ 1.94
SNX4-203ENST00000471751 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.17■■□□□ 1.94
SNX4-203ENST00000471751 ZNF142P52746 1687 aaPredicted RBP27.17■■□□□ 1.94
SNX4-203ENST00000471751 IFT172Q9UG01 1749 aa27.16■■□□□ 1.94
SNX4-203ENST00000471751 PPLO60437 1756 aa27.14■■□□□ 1.94
SNX4-203ENST00000471751 CEP170BQ9Y4F5 1589 aaPredicted RBP27.14■■□□□ 1.94
SNX4-203ENST00000471751 MYO5BQ9ULV0 1848 aa27.13■■□□□ 1.93
SNX4-203ENST00000471751 NEXMIFQ5QGS0 1516 aa27.12■■□□□ 1.93
SNX4-203ENST00000471751 TMEM2Q9UHN6 1383 aa27.12■■□□□ 1.93
SNX4-203ENST00000471751 NRXN1Q9ULB1 1477 aa27.11■■□□□ 1.93
SNX4-203ENST00000471751 SLIT1O75093 1534 aa27.1■■□□□ 1.93
SNX4-203ENST00000471751 ARHGAP23Q9P227 1491 aa27.09■■□□□ 1.93
SNX4-203ENST00000471751 PRAG1Q86YV5 1406 aa27.09■■□□□ 1.93
SNX4-203ENST00000471751 KDM2AQ9Y2K7 1162 aa27.08■■□□□ 1.93
SNX4-203ENST00000471751 RIMS2Q9UQ26 1411 aa27.07■■□□□ 1.92
SNX4-203ENST00000471751 EID1Q9Y6B2 187 aa27.05■■□□□ 1.92
SNX4-203ENST00000471751 KIAA1210Q9ULL0 1709 aa27.04■■□□□ 1.92
SNX4-203ENST00000471751 NBPF8Q3BBV2 869 aa27.02■■□□□ 1.92
SNX4-203ENST00000471751 PIK3C2GO75747 1445 aa27.01■■□□□ 1.91
SNX4-203ENST00000471751 ADGRF5Q8IZF2 1346 aa26.99■■□□□ 1.91
SNX4-203ENST00000471751 RALGAPBQ86X10 1494 aa26.98■■□□□ 1.91
SNX4-203ENST00000471751 C14orf93Q9H972 538 aaKnown RBP26.98■■□□□ 1.91
SNX4-203ENST00000471751 TXNDC2Q86VQ3 553 aa26.97■■□□□ 1.91
SNX4-203ENST00000471751 ANKLE2Q86XL3 938 aa26.97■■□□□ 1.91
SNX4-203ENST00000471751 GPRASP1Q5JY77 1395 aa26.96■■□□□ 1.91
SNX4-203ENST00000471751 DMRT2Q9Y5R5 561 aa26.96■■□□□ 1.91
SNX4-203ENST00000471751 LAMC1P11047 1609 aa26.96■■□□□ 1.91
SNX4-203ENST00000471751 PLEKHG1Q9ULL1 1385 aa26.96■■□□□ 1.91
SNX4-203ENST00000471751 TRPM1Q7Z4N2 1603 aa26.95■■□□□ 1.91
SNX4-203ENST00000471751 FBXO41Q8TF61 875 aa26.95■■□□□ 1.91
SNX4-203ENST00000471751 NCKAP5LQ9HCH0 1330 aa26.95■■□□□ 1.9
SNX4-203ENST00000471751 SCAF11Q99590 1463 aaKnown RBP26.94■■□□□ 1.9
SNX4-203ENST00000471751 SETBP1Q9Y6X0 1596 aa26.92■■□□□ 1.9
SNX4-203ENST00000471751 LTKP29376 864 aa26.91■■□□□ 1.9
SNX4-203ENST00000471751 CERKQ8TCT0 537 aa26.9■■□□□ 1.9
SNX4-203ENST00000471751 ROCK2O75116 1388 aaKnown RBP26.89■■□□□ 1.9
SNX4-203ENST00000471751 MED14O60244 1454 aa26.88■■□□□ 1.89
SNX4-203ENST00000471751 CFAP70Q5T0N1 1121 aa26.86■■□□□ 1.89
SNX4-203ENST00000471751 TBX22Q9Y458 520 aa26.86■■□□□ 1.89
SNX4-203ENST00000471751 ALKQ9UM73 1620 aa26.85■■□□□ 1.89
SNX4-203ENST00000471751 NUTM2DQ5VT03 806 aaPredicted RBP26.85■■□□□ 1.89
SNX4-203ENST00000471751 CARD11Q9BXL7 1154 aa26.85■■□□□ 1.89
SNX4-203ENST00000471751 DIP2AQ14689 1571 aa26.84■■□□□ 1.89
SNX4-203ENST00000471751 POLR1AO95602 1720 aaPredicted RBP26.82■■□□□ 1.88
SNX4-203ENST00000471751 EIF4G2P78344 907 aaKnown RBP eCLIP26.82■■□□□ 1.88
SNX4-203ENST00000471751 NBPF1Q3BBV0 1214 aa26.82■■□□□ 1.88
SNX4-203ENST00000471751 PIK3R4Q99570 1358 aa26.81■■□□□ 1.88
SNX4-203ENST00000471751 NRXN3Q9Y4C0 1643 aa26.81■■□□□ 1.88
SNX4-203ENST00000471751 SLC24A1O60721 1099 aa26.81■■□□□ 1.88
SNX4-203ENST00000471751 ADGRB1O14514 1584 aa26.8■■□□□ 1.88
SNX4-203ENST00000471751 ADAMTS13Q76LX8 1427 aa26.79■■□□□ 1.88
SNX4-203ENST00000471751 STRCQ7RTU9 1775 aa26.78■■□□□ 1.88
SNX4-203ENST00000471751 SETD1AO15047 1707 aaKnown RBP26.77■■□□□ 1.88
SNX4-203ENST00000471751 NPHP4O75161 1426 aaPredicted RBP26.77■■□□□ 1.88
SNX4-203ENST00000471751 SIRT1Q96EB6 747 aa26.76■■□□□ 1.87
SNX4-203ENST00000471751 BCANQ96GW7 911 aa26.76■■□□□ 1.87
SNX4-203ENST00000471751 EIF3AQ14152 1382 aaKnown RBP26.75■■□□□ 1.87
SNX4-203ENST00000471751 IQGAP1P46940 1657 aa26.75■■□□□ 1.87
SNX4-203ENST00000471751 ABCC11Q96J66 1382 aa26.73■■□□□ 1.87
SNX4-203ENST00000471751 USP47Q96K76 1375 aa26.72■■□□□ 1.87
SNX4-203ENST00000471751 LRPPRCP42704 1394 aaKnown RBP26.71■■□□□ 1.87
SNX4-203ENST00000471751 ZNF335Q9H4Z2 1342 aaPredicted RBP26.71■■□□□ 1.87
SNX4-203ENST00000471751 YTHDC2Q9H6S0 1430 aaKnown RBP26.71■■□□□ 1.87
SNX4-203ENST00000471751 DLC1Q96QB1 1528 aa26.69■■□□□ 1.86
SNX4-203ENST00000471751 TECPR2O15040 1411 aa26.69■■□□□ 1.86
SNX4-203ENST00000471751 ASXL1Q8IXJ9 1541 aa26.68■■□□□ 1.86
SNX4-203ENST00000471751 TMEM132EQ6IEE7 984 aa26.67■■□□□ 1.86
SNX4-203ENST00000471751 METP08581 1390 aa26.67■■□□□ 1.86
SNX4-203ENST00000471751 HSPA5P11021 654 aaKnown RBP26.66■■□□□ 1.86
SNX4-203ENST00000471751 SLC26A8Q96RN1 970 aa26.66■■□□□ 1.86
SNX4-203ENST00000471751 SBNO2Q9Y2G9 1366 aa26.64■■□□□ 1.86
SNX4-203ENST00000471751 KNDC1Q76NI1 1749 aa26.64■■□□□ 1.86
SNX4-203ENST00000471751 FAM135BQ49AJ0 1406 aa26.64■■□□□ 1.85
SNX4-203ENST00000471751 ZNF316A6NFI3 1004 aaPredicted RBP26.63■■□□□ 1.85
SNX4-203ENST00000471751 ST20-MTHFSA0A0A6YYL1 179 aa26.62■■□□□ 1.85
SNX4-203ENST00000471751 CHD2O14647 1828 aaKnown RBP26.61■■□□□ 1.85
SNX4-203ENST00000471751 TRAK1Q9UPV9 953 aa26.61■■□□□ 1.85
SNX4-203ENST00000471751 CENPJQ9HC77 1338 aaPredicted RBP26.59■■□□□ 1.85
SNX4-203ENST00000471751 KCNA6P17658 529 aa26.59■■□□□ 1.85
SNX4-203ENST00000471751 AMOTL2Q9Y2J4 779 aa26.59■■□□□ 1.85
SNX4-203ENST00000471751 CPS1P31327 1500 aa26.58■■□□□ 1.85
SNX4-203ENST00000471751 ARHGEF28Q8N1W1 1705 aaKnown RBP26.58■■□□□ 1.85
SNX4-203ENST00000471751 PTCH1Q13635 1447 aa26.58■■□□□ 1.85
SNX4-203ENST00000471751 LTBP4Q8N2S1 1624 aa26.57■■□□□ 1.84
SNX4-203ENST00000471751 PTPRUQ92729 1446 aa26.55■■□□□ 1.84
SNX4-203ENST00000471751 XRN1Q8IZH2 1706 aaKnown RBP26.55■■□□□ 1.84
SNX4-203ENST00000471751 PUS7Q96PZ0 661 aaKnown RBP26.55■■□□□ 1.84
SNX4-203ENST00000471751 TESK2Q96S53 571 aa26.55■■□□□ 1.84
SNX4-203ENST00000471751 STK26Q9P289 416 aa26.55■■□□□ 1.84
SNX4-203ENST00000471751 CDCA8Q53HL2 280 aa26.54■■□□□ 1.84
SNX4-203ENST00000471751 POGKQ9P215 609 aa26.53■■□□□ 1.84
SNX4-203ENST00000471751 NWD1Q149M9 1564 aa26.52■■□□□ 1.84
SNX4-203ENST00000471751 TMF1P82094 1093 aa26.52■■□□□ 1.84
SNX4-203ENST00000471751 SENP3Q9H4L4 574 aaPredicted RBP26.51■■□□□ 1.83
SNX4-203ENST00000471751 PRAM1Q96QH2 718 aa26.5■■□□□ 1.83
SNX4-203ENST00000471751 NKTRP30414 1462 aaKnown RBP26.49■■□□□ 1.83
SNX4-203ENST00000471751 NCOA3Q9Y6Q9 1424 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms