RNA–Protein interactions for RNA: ENST00000471728.1

PSEN2-205, Transcript of presenilin 2, humanhuman

TSL 3

Gene PSEN2, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-205ENST00000471728 FGD6Q6ZV73 1430 aa22.19■■□□□ 1.14
PSEN2-205ENST00000471728 APLP2Q06481 763 aa22.17■■□□□ 1.14
PSEN2-205ENST00000471728 RPRD2Q5VT52 1461 aaKnown RBP22.16■■□□□ 1.14
PSEN2-205ENST00000471728 CHIC2Q9UKJ5 165 aa22.16■■□□□ 1.14
PSEN2-205ENST00000471728 PLEKHG1Q9ULL1 1385 aa22.15■■□□□ 1.14
PSEN2-205ENST00000471728 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
PSEN2-205ENST00000471728 ZFYVE9O95405 1425 aa22.14■■□□□ 1.14
PSEN2-205ENST00000471728 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
PSEN2-205ENST00000471728 PHLPP1O60346 1717 aa22.14■■□□□ 1.13
PSEN2-205ENST00000471728 NCOA3Q9Y6Q9 1424 aa22.13■■□□□ 1.13
PSEN2-205ENST00000471728 PPP1R15AO75807 674 aaPredicted RBP22.12■■□□□ 1.13
PSEN2-205ENST00000471728 ADGRL2O95490 1459 aa22.11■■□□□ 1.13
PSEN2-205ENST00000471728 SPATA31A6Q5VVP1 1343 aa22.1■■□□□ 1.13
PSEN2-205ENST00000471728 RIMS2Q9UQ26 1411 aa22.1■■□□□ 1.13
PSEN2-205ENST00000471728 COL16A1Q07092 1604 aaPredicted RBP22.09■■□□□ 1.13
PSEN2-205ENST00000471728 TBX22Q9Y458 520 aa22.08■■□□□ 1.13
PSEN2-205ENST00000471728 SETD1AO15047 1707 aaKnown RBP22.06■■□□□ 1.12
PSEN2-205ENST00000471728 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.06■■□□□ 1.12
PSEN2-205ENST00000471728 CHD2O14647 1828 aaKnown RBP22.06■■□□□ 1.12
PSEN2-205ENST00000471728 ANKRD50Q9ULJ7 1429 aa22.06■■□□□ 1.12
PSEN2-205ENST00000471728 ZNF772Q68DY9 489 aaPredicted RBP22.05■■□□□ 1.12
PSEN2-205ENST00000471728 C14orf37Q86TY3 774 aa22.05■■□□□ 1.12
PSEN2-205ENST00000471728 MEX3CQ5U5Q3 659 aaKnown RBP22.04■■□□□ 1.12
PSEN2-205ENST00000471728 CADPS2Q86UW7 1296 aa22.04■■□□□ 1.12
PSEN2-205ENST00000471728 LRP6O75581 1613 aa22.04■■□□□ 1.12
PSEN2-205ENST00000471728 TMEM131LA2VDJ0 1609 aa22.03■■□□□ 1.12
PSEN2-205ENST00000471728 PIK3R4Q99570 1358 aa22.02■■□□□ 1.12
PSEN2-205ENST00000471728 C19orf44Q9H6X5 657 aa22.02■■□□□ 1.12
PSEN2-205ENST00000471728 AHDC1Q5TGY3 1603 aaPredicted RBP22.02■■□□□ 1.11
PSEN2-205ENST00000471728 GCC2Q8IWJ2 1684 aa22.01■■□□□ 1.11
PSEN2-205ENST00000471728 DIP2AQ14689 1571 aa22.01■■□□□ 1.11
PSEN2-205ENST00000471728 ATF3P18847 181 aa22.01■■□□□ 1.11
PSEN2-205ENST00000471728 ADAMTS13Q76LX8 1427 aa22■■□□□ 1.11
PSEN2-205ENST00000471728 UPF1Q92900 1129 aaKnown RBP eCLIP21.98■■□□□ 1.11
PSEN2-205ENST00000471728 CHGAP10645 457 aaKnown RBP21.97■■□□□ 1.11
PSEN2-205ENST00000471728 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
PSEN2-205ENST00000471728 SHPRHQ149N8 1683 aa21.97■■□□□ 1.11
PSEN2-205ENST00000471728 MYO5BQ9ULV0 1848 aa21.96■■□□□ 1.11
PSEN2-205ENST00000471728 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.95■■□□□ 1.1
PSEN2-205ENST00000471728 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
PSEN2-205ENST00000471728 TRPM2O94759 1503 aa21.94■■□□□ 1.1
PSEN2-205ENST00000471728 UNC13BO14795 1591 aa21.94■■□□□ 1.1
PSEN2-205ENST00000471728 RXRBP28702 533 aa21.93■■□□□ 1.1
PSEN2-205ENST00000471728 DCCP43146 1447 aa21.93■■□□□ 1.1
PSEN2-205ENST00000471728 CDK12Q9NYV4 1490 aaPredicted RBP21.92■■□□□ 1.1
PSEN2-205ENST00000471728 NUTM2DQ5VT03 806 aaPredicted RBP21.92■■□□□ 1.1
PSEN2-205ENST00000471728 BRINP3Q76B58 766 aa21.92■■□□□ 1.1
PSEN2-205ENST00000471728 AMOTL2Q9Y2J4 779 aa21.91■■□□□ 1.1
PSEN2-205ENST00000471728 E9PCH4 1651 aa21.88■■□□□ 1.09
PSEN2-205ENST00000471728 PTPRUQ92729 1446 aa21.87■■□□□ 1.09
PSEN2-205ENST00000471728 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
PSEN2-205ENST00000471728 ASXL1Q8IXJ9 1541 aa21.86■■□□□ 1.09
PSEN2-205ENST00000471728 NUTM2BA6NNL0 878 aaPredicted RBP21.86■■□□□ 1.09
PSEN2-205ENST00000471728 NUTM2EB1AL46 878 aaPredicted RBP21.86■■□□□ 1.09
PSEN2-205ENST00000471728 NUTM2AQ8IVF1 878 aaPredicted RBP21.86■■□□□ 1.09
PSEN2-205ENST00000471728 ROCK1Q13464 1354 aa21.86■■□□□ 1.09
PSEN2-205ENST00000471728 IQGAP3Q86VI3 1631 aa21.85■■□□□ 1.09
PSEN2-205ENST00000471728 AFF2P51816 1311 aa21.83■■□□□ 1.09
PSEN2-205ENST00000471728 MST1RQ04912 1400 aa21.83■■□□□ 1.09
PSEN2-205ENST00000471728 LRRC59Q96AG4 307 aaKnown RBP21.82■■□□□ 1.08
PSEN2-205ENST00000471728 XRN1Q8IZH2 1706 aaKnown RBP21.81■■□□□ 1.08
PSEN2-205ENST00000471728 NUP155O75694 1391 aa21.81■■□□□ 1.08
PSEN2-205ENST00000471728 SETBP1Q9Y6X0 1596 aa21.81■■□□□ 1.08
PSEN2-205ENST00000471728 NHSL1Q5SYE7 1610 aa21.79■■□□□ 1.08
PSEN2-205ENST00000471728 NRXN3Q9Y4C0 1643 aa21.77■■□□□ 1.08
PSEN2-205ENST00000471728 RBM6P78332 1123 aaKnown RBP21.76■■□□□ 1.07
PSEN2-205ENST00000471728 C8orf37Q96NL8 207 aa21.76■■□□□ 1.07
PSEN2-205ENST00000471728 ADGRL3Q9HAR2 1447 aa21.76■■□□□ 1.07
PSEN2-205ENST00000471728 METP08581 1390 aa21.75■■□□□ 1.07
PSEN2-205ENST00000471728 PNPLA6Q8IY17 1366 aa21.75■■□□□ 1.07
PSEN2-205ENST00000471728 RGS12O14924 1447 aa21.75■■□□□ 1.07
PSEN2-205ENST00000471728 QTRT2Q9H974 415 aaKnown RBP21.74■■□□□ 1.07
PSEN2-205ENST00000471728 ZNF326Q5BKZ1 582 aaKnown RBP21.73■■□□□ 1.07
PSEN2-205ENST00000471728 NGLY1Q96IV0 654 aa21.7■■□□□ 1.06
PSEN2-205ENST00000471728 DDX17Q92841 729 aaKnown RBP21.69■■□□□ 1.06
PSEN2-205ENST00000471728 SPHKAPQ2M3C7 1700 aa21.67■■□□□ 1.06
PSEN2-205ENST00000471728 C1orf167Q5SNV9 1468 aa21.67■■□□□ 1.06
PSEN2-205ENST00000471728 ATAD2Q6PL18 1390 aa21.66■■□□□ 1.06
PSEN2-205ENST00000471728 NALCNQ8IZF0 1738 aa21.66■■□□□ 1.06
PSEN2-205ENST00000471728 ADAMTS2O95450 1211 aa21.65■■□□□ 1.06
PSEN2-205ENST00000471728 NEXMIFQ5QGS0 1516 aa21.65■■□□□ 1.06
PSEN2-205ENST00000471728 PTCH1Q13635 1447 aa21.64■■□□□ 1.06
PSEN2-205ENST00000471728 LAMC1P11047 1609 aa21.64■■□□□ 1.05
PSEN2-205ENST00000471728 SRCAPQ6ZRS2 3230 aa21.63■■□□□ 1.05
PSEN2-205ENST00000471728 SOS2Q07890 1332 aaPredicted RBP21.62■■□□□ 1.05
PSEN2-205ENST00000471728 ITGAEP38570 1179 aa21.62■■□□□ 1.05
PSEN2-205ENST00000471728 FOXD1Q16676 465 aa21.62■■□□□ 1.05
PSEN2-205ENST00000471728 USP21Q9UK80 565 aa21.61■■□□□ 1.05
PSEN2-205ENST00000471728 TRPC5Q9UL62 973 aaPredicted RBP21.61■■□□□ 1.05
PSEN2-205ENST00000471728 CLTCL1P53675 1640 aa21.59■■□□□ 1.05
PSEN2-205ENST00000471728 PRAG1Q86YV5 1406 aa21.59■■□□□ 1.05
PSEN2-205ENST00000471728 FNBP4Q8N3X1 1017 aaPredicted RBP21.58■■□□□ 1.05
PSEN2-205ENST00000471728 ORAI2Q96SN7 254 aa21.57■■□□□ 1.04
PSEN2-205ENST00000471728 ROBO2Q9HCK4 1378 aa21.57■■□□□ 1.04
PSEN2-205ENST00000471728 VGFO15240 615 aaPredicted RBP21.56■■□□□ 1.04
PSEN2-205ENST00000471728 ATRNO75882 1429 aa21.55■■□□□ 1.04
PSEN2-205ENST00000471728 COL22A1Q8NFW1 1626 aaPredicted RBP21.54■■□□□ 1.04
PSEN2-205ENST00000471728 HFM1A2PYH4 1435 aa21.54■■□□□ 1.04
PSEN2-205ENST00000471728 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
PSEN2-205ENST00000471728 CCDC125Q86Z20 511 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms