RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
PSPC1-203ENST00000471658 KDM5AP29375 1690 aaKnown RBP27.52■■■□□ 2
PSPC1-203ENST00000471658 RIMS2Q9UQ26 1411 aa27.52■■■□□ 2
PSPC1-203ENST00000471658 SENP3Q9H4L4 574 aaPredicted RBP27.52■■■□□ 2
PSPC1-203ENST00000471658 TMEM2Q9UHN6 1383 aa27.52■■■□□ 2
PSPC1-203ENST00000471658 IFT172Q9UG01 1749 aa27.51■■□□□ 1.99
PSPC1-203ENST00000471658 PPLO60437 1756 aa27.5■■□□□ 1.99
PSPC1-203ENST00000471658 ZNF142P52746 1687 aaPredicted RBP27.5■■□□□ 1.99
PSPC1-203ENST00000471658 ZFYVE9O95405 1425 aa27.49■■□□□ 1.99
PSPC1-203ENST00000471658 PRAG1Q86YV5 1406 aa27.47■■□□□ 1.99
PSPC1-203ENST00000471658 VGFO15240 615 aaPredicted RBP27.47■■□□□ 1.99
PSPC1-203ENST00000471658 LTKP29376 864 aa27.47■■□□□ 1.99
PSPC1-203ENST00000471658 MYOM2P54296 1465 aa27.46■■□□□ 1.99
PSPC1-203ENST00000471658 STAC3Q96MF2 364 aa27.45■■□□□ 1.99
PSPC1-203ENST00000471658 ARHGAP23Q9P227 1491 aa27.44■■□□□ 1.98
PSPC1-203ENST00000471658 TXNDC2Q86VQ3 553 aa27.44■■□□□ 1.98
PSPC1-203ENST00000471658 SLIT1O75093 1534 aa27.43■■□□□ 1.98
PSPC1-203ENST00000471658 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.43■■□□□ 1.98
PSPC1-203ENST00000471658 NRXN1Q9ULB1 1477 aa27.41■■□□□ 1.98
PSPC1-203ENST00000471658 HDGFP51858 240 aaKnown RBP27.41■■□□□ 1.98
PSPC1-203ENST00000471658 HSPA2P54652 639 aa27.41■■□□□ 1.98
PSPC1-203ENST00000471658 EID1Q9Y6B2 187 aa27.4■■□□□ 1.98
PSPC1-203ENST00000471658 CFAP70Q5T0N1 1121 aa27.39■■□□□ 1.98
PSPC1-203ENST00000471658 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
PSPC1-203ENST00000471658 NBPF1Q3BBV0 1214 aa27.38■■□□□ 1.97
PSPC1-203ENST00000471658 PIK3C2GO75747 1445 aa27.37■■□□□ 1.97
PSPC1-203ENST00000471658 ANKLE2Q86XL3 938 aa27.35■■□□□ 1.97
PSPC1-203ENST00000471658 NCKAP5LQ9HCH0 1330 aa27.34■■□□□ 1.97
PSPC1-203ENST00000471658 C14orf93Q9H972 538 aaKnown RBP27.34■■□□□ 1.97
PSPC1-203ENST00000471658 SCAF11Q99590 1463 aaKnown RBP27.33■■□□□ 1.97
PSPC1-203ENST00000471658 BCANQ96GW7 911 aa27.33■■□□□ 1.97
PSPC1-203ENST00000471658 TRPM1Q7Z4N2 1603 aa27.33■■□□□ 1.97
PSPC1-203ENST00000471658 PLEKHG1Q9ULL1 1385 aa27.31■■□□□ 1.96
PSPC1-203ENST00000471658 RALGAPBQ86X10 1494 aa27.31■■□□□ 1.96
PSPC1-203ENST00000471658 ROCK2O75116 1388 aaKnown RBP27.29■■□□□ 1.96
PSPC1-203ENST00000471658 TMEM132EQ6IEE7 984 aa27.28■■□□□ 1.96
PSPC1-203ENST00000471658 NRXN3Q9Y4C0 1643 aa27.27■■□□□ 1.96
PSPC1-203ENST00000471658 ALKQ9UM73 1620 aa27.27■■□□□ 1.96
PSPC1-203ENST00000471658 SLC26A8Q96RN1 970 aa27.27■■□□□ 1.96
PSPC1-203ENST00000471658 CARD11Q9BXL7 1154 aa27.27■■□□□ 1.96
PSPC1-203ENST00000471658 IQGAP1P46940 1657 aa27.25■■□□□ 1.95
PSPC1-203ENST00000471658 SETBP1Q9Y6X0 1596 aa27.25■■□□□ 1.95
PSPC1-203ENST00000471658 ADAMTS13Q76LX8 1427 aa27.25■■□□□ 1.95
PSPC1-203ENST00000471658 KIAA1210Q9ULL0 1709 aa27.24■■□□□ 1.95
PSPC1-203ENST00000471658 GPRASP1Q5JY77 1395 aa27.23■■□□□ 1.95
PSPC1-203ENST00000471658 NPHP4O75161 1426 aaPredicted RBP27.21■■□□□ 1.95
PSPC1-203ENST00000471658 POLR1AO95602 1720 aaPredicted RBP27.2■■□□□ 1.94
PSPC1-203ENST00000471658 ADGRB1O14514 1584 aa27.2■■□□□ 1.94
PSPC1-203ENST00000471658 ASXL1Q8IXJ9 1541 aa27.2■■□□□ 1.94
PSPC1-203ENST00000471658 METP08581 1390 aa27.2■■□□□ 1.94
PSPC1-203ENST00000471658 MED14O60244 1454 aa27.19■■□□□ 1.94
PSPC1-203ENST00000471658 SETD1AO15047 1707 aaKnown RBP27.18■■□□□ 1.94
PSPC1-203ENST00000471658 LAMC1P11047 1609 aa27.18■■□□□ 1.94
PSPC1-203ENST00000471658 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
PSPC1-203ENST00000471658 HIRIP3Q9BW71 556 aaPredicted RBP27.18■■□□□ 1.94
PSPC1-203ENST00000471658 TBX22Q9Y458 520 aa27.18■■□□□ 1.94
PSPC1-203ENST00000471658 STK26Q9P289 416 aa27.16■■□□□ 1.94
PSPC1-203ENST00000471658 HSPA5P11021 654 aaKnown RBP27.15■■□□□ 1.94
PSPC1-203ENST00000471658 STRCQ7RTU9 1775 aa27.14■■□□□ 1.94
PSPC1-203ENST00000471658 TRAK1Q9UPV9 953 aa27.14■■□□□ 1.94
PSPC1-203ENST00000471658 USP47Q96K76 1375 aa27.13■■□□□ 1.93
PSPC1-203ENST00000471658 EIF4G2P78344 907 aaKnown RBP eCLIP27.12■■□□□ 1.93
PSPC1-203ENST00000471658 YTHDC2Q9H6S0 1430 aaKnown RBP27.11■■□□□ 1.93
PSPC1-203ENST00000471658 PTPRUQ92729 1446 aa27.1■■□□□ 1.93
PSPC1-203ENST00000471658 DIP2AQ14689 1571 aa27.08■■□□□ 1.93
PSPC1-203ENST00000471658 LRPPRCP42704 1394 aaKnown RBP27.07■■□□□ 1.92
PSPC1-203ENST00000471658 ST20-MTHFSA0A0A6YYL1 179 aa27.07■■□□□ 1.92
PSPC1-203ENST00000471658 AMOTL2Q9Y2J4 779 aa27.05■■□□□ 1.92
PSPC1-203ENST00000471658 ABCC11Q96J66 1382 aa27.03■■□□□ 1.92
PSPC1-203ENST00000471658 PIK3R4Q99570 1358 aa27.01■■□□□ 1.91
PSPC1-203ENST00000471658 WAPLQ7Z5K2 1190 aa27■■□□□ 1.91
PSPC1-203ENST00000471658 KCNA6P17658 529 aa26.99■■□□□ 1.91
PSPC1-203ENST00000471658 SAFB2Q14151 953 aaKnown RBP eCLIP26.99■■□□□ 1.91
PSPC1-203ENST00000471658 PRAM1Q96QH2 718 aa26.99■■□□□ 1.91
PSPC1-203ENST00000471658 EIF3AQ14152 1382 aaKnown RBP26.98■■□□□ 1.91
PSPC1-203ENST00000471658 ROBO2Q9HCK4 1378 aa26.98■■□□□ 1.91
PSPC1-203ENST00000471658 ARHGEF28Q8N1W1 1705 aaKnown RBP26.97■■□□□ 1.91
PSPC1-203ENST00000471658 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
PSPC1-203ENST00000471658 CENPJQ9HC77 1338 aaPredicted RBP26.97■■□□□ 1.91
PSPC1-203ENST00000471658 ZNF316A6NFI3 1004 aaPredicted RBP26.96■■□□□ 1.91
PSPC1-203ENST00000471658 TESK2Q96S53 571 aa26.96■■□□□ 1.91
PSPC1-203ENST00000471658 POGKQ9P215 609 aa26.96■■□□□ 1.91
PSPC1-203ENST00000471658 TECPR2O15040 1411 aa26.96■■□□□ 1.91
PSPC1-203ENST00000471658 CHD2O14647 1828 aaKnown RBP26.95■■□□□ 1.91
PSPC1-203ENST00000471658 DLC1Q96QB1 1528 aa26.95■■□□□ 1.9
PSPC1-203ENST00000471658 DMRT2Q9Y5R5 561 aa26.94■■□□□ 1.9
PSPC1-203ENST00000471658 KNDC1Q76NI1 1749 aa26.93■■□□□ 1.9
PSPC1-203ENST00000471658 XRN1Q8IZH2 1706 aaKnown RBP26.93■■□□□ 1.9
PSPC1-203ENST00000471658 C11orf95C9JLR9 678 aaPredicted RBP26.93■■□□□ 1.9
PSPC1-203ENST00000471658 SIRT1Q96EB6 747 aa26.93■■□□□ 1.9
PSPC1-203ENST00000471658 CPS1P31327 1500 aa26.92■■□□□ 1.9
PSPC1-203ENST00000471658 RBM33Q96EV2 1170 aaKnown RBP26.9■■□□□ 1.9
PSPC1-203ENST00000471658 FAM135BQ49AJ0 1406 aa26.89■■□□□ 1.9
PSPC1-203ENST00000471658 MINK1Q8N4C8 1332 aaPredicted RBP26.89■■□□□ 1.89
PSPC1-203ENST00000471658 ZNF335Q9H4Z2 1342 aaPredicted RBP26.89■■□□□ 1.89
PSPC1-203ENST00000471658 PTCH1Q13635 1447 aa26.87■■□□□ 1.89
PSPC1-203ENST00000471658 QRICH2Q9H0J4 1663 aa26.87■■□□□ 1.89
PSPC1-203ENST00000471658 NWD1Q149M9 1564 aa26.87■■□□□ 1.89
PSPC1-203ENST00000471658 STRCP1A6NGW2 1772 aa26.87■■□□□ 1.89
PSPC1-203ENST00000471658 DISP3Q9P2K9 1392 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms