RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NEURL4Q96JN8 1562 aa24.99■■□□□ 1.59
HSPG2-208ENST00000471322 POLR1AO95602 1720 aaPredicted RBP24.98■■□□□ 1.59
HSPG2-208ENST00000471322 EID1Q9Y6B2 187 aa24.98■■□□□ 1.59
HSPG2-208ENST00000471322 CLTCL1P53675 1640 aa24.98■■□□□ 1.59
HSPG2-208ENST00000471322 SLIT1O75093 1534 aa24.97■■□□□ 1.59
HSPG2-208ENST00000471322 DIEXFQ68CQ4 756 aaKnown RBP24.97■■□□□ 1.59
HSPG2-208ENST00000471322 ARHGAP23Q9P227 1491 aa24.97■■□□□ 1.59
HSPG2-208ENST00000471322 SCAF11Q99590 1463 aaKnown RBP24.96■■□□□ 1.59
HSPG2-208ENST00000471322 KDM5AP29375 1690 aaKnown RBP24.95■■□□□ 1.59
HSPG2-208ENST00000471322 ZNF326Q5BKZ1 582 aaKnown RBP24.95■■□□□ 1.58
HSPG2-208ENST00000471322 NPHP4O75161 1426 aaPredicted RBP24.94■■□□□ 1.58
HSPG2-208ENST00000471322 RIMS2Q9UQ26 1411 aa24.91■■□□□ 1.58
HSPG2-208ENST00000471322 BCANQ96GW7 911 aa24.9■■□□□ 1.58
HSPG2-208ENST00000471322 CCDC144AA2RUR9 1427 aa24.9■■□□□ 1.58
HSPG2-208ENST00000471322 ZNF335Q9H4Z2 1342 aaPredicted RBP24.9■■□□□ 1.58
HSPG2-208ENST00000471322 MED14O60244 1454 aa24.9■■□□□ 1.58
HSPG2-208ENST00000471322 ZFYVE9O95405 1425 aa24.89■■□□□ 1.58
HSPG2-208ENST00000471322 IQGAP1P46940 1657 aa24.88■■□□□ 1.57
HSPG2-208ENST00000471322 SLC26A8Q96RN1 970 aa24.86■■□□□ 1.57
HSPG2-208ENST00000471322 RGL3Q3MIN7 710 aa24.86■■□□□ 1.57
HSPG2-208ENST00000471322 KIF1BO60333 1816 aa24.85■■□□□ 1.57
HSPG2-208ENST00000471322 HDGFP51858 240 aaKnown RBP24.84■■□□□ 1.57
HSPG2-208ENST00000471322 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.83■■□□□ 1.56
HSPG2-208ENST00000471322 L3MBTL2Q969R5 705 aa24.83■■□□□ 1.56
HSPG2-208ENST00000471322 PLEKHG1Q9ULL1 1385 aa24.78■■□□□ 1.56
HSPG2-208ENST00000471322 NEXMIFQ5QGS0 1516 aa24.77■■□□□ 1.56
HSPG2-208ENST00000471322 SPATA31E1Q6ZUB1 1445 aa24.76■■□□□ 1.55
HSPG2-208ENST00000471322 LTBP4Q8N2S1 1624 aa24.76■■□□□ 1.55
HSPG2-208ENST00000471322 CERKQ8TCT0 537 aa24.75■■□□□ 1.55
HSPG2-208ENST00000471322 VGFO15240 615 aaPredicted RBP24.7■■□□□ 1.54
HSPG2-208ENST00000471322 ADAMTS13Q76LX8 1427 aa24.7■■□□□ 1.54
HSPG2-208ENST00000471322 RPGRIP1LQ68CZ1 1315 aa24.7■■□□□ 1.54
HSPG2-208ENST00000471322 STRCP1A6NGW2 1772 aa24.69■■□□□ 1.54
HSPG2-208ENST00000471322 ADGRF5Q8IZF2 1346 aa24.67■■□□□ 1.54
HSPG2-208ENST00000471322 PPLO60437 1756 aa24.66■■□□□ 1.54
HSPG2-208ENST00000471322 TBX22Q9Y458 520 aa24.66■■□□□ 1.54
HSPG2-208ENST00000471322 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
HSPG2-208ENST00000471322 NRXN3Q9Y4C0 1643 aa24.65■■□□□ 1.54
HSPG2-208ENST00000471322 KDM2AQ9Y2K7 1162 aa24.63■■□□□ 1.53
HSPG2-208ENST00000471322 SETBP1Q9Y6X0 1596 aa24.63■■□□□ 1.53
HSPG2-208ENST00000471322 KCNA6P17658 529 aa24.62■■□□□ 1.53
HSPG2-208ENST00000471322 METP08581 1390 aa24.61■■□□□ 1.53
HSPG2-208ENST00000471322 CPS1P31327 1500 aa24.61■■□□□ 1.53
HSPG2-208ENST00000471322 DCAF11Q8TEB1 546 aa24.61■■□□□ 1.53
HSPG2-208ENST00000471322 NBPF8Q3BBV2 869 aa24.6■■□□□ 1.53
HSPG2-208ENST00000471322 IFT172Q9UG01 1749 aa24.6■■□□□ 1.53
HSPG2-208ENST00000471322 EIF4G2P78344 907 aaKnown RBP eCLIP24.59■■□□□ 1.53
HSPG2-208ENST00000471322 DIP2AQ14689 1571 aa24.58■■□□□ 1.53
HSPG2-208ENST00000471322 LRRC7Q96NW7 1537 aa24.58■■□□□ 1.53
HSPG2-208ENST00000471322 PROSER2Q86WR7 435 aaPredicted RBP24.57■■□□□ 1.52
HSPG2-208ENST00000471322 PTPRUQ92729 1446 aa24.57■■□□□ 1.52
HSPG2-208ENST00000471322 AMOTL2Q9Y2J4 779 aa24.57■■□□□ 1.52
HSPG2-208ENST00000471322 ALKQ9UM73 1620 aa24.55■■□□□ 1.52
HSPG2-208ENST00000471322 CHD2O14647 1828 aaKnown RBP24.55■■□□□ 1.52
HSPG2-208ENST00000471322 TMEM94Q12767 1356 aa24.53■■□□□ 1.52
HSPG2-208ENST00000471322 NWD1Q149M9 1564 aa24.52■■□□□ 1.52
HSPG2-208ENST00000471322 PIK3C2GO75747 1445 aa24.52■■□□□ 1.52
HSPG2-208ENST00000471322 HSPA5P11021 654 aaKnown RBP24.52■■□□□ 1.52
HSPG2-208ENST00000471322 TMEM132EQ6IEE7 984 aa24.52■■□□□ 1.52
HSPG2-208ENST00000471322 ILDR1Q86SU0 546 aaPredicted RBP24.52■■□□□ 1.52
HSPG2-208ENST00000471322 FBXO41Q8TF61 875 aa24.52■■□□□ 1.52
HSPG2-208ENST00000471322 PIK3R4Q99570 1358 aa24.52■■□□□ 1.52
HSPG2-208ENST00000471322 UBAP1LF5GYI3 381 aa24.51■■□□□ 1.51
HSPG2-208ENST00000471322 CFAP70Q5T0N1 1121 aa24.5■■□□□ 1.51
HSPG2-208ENST00000471322 MYOM2P54296 1465 aa24.5■■□□□ 1.51
HSPG2-208ENST00000471322 NKTRP30414 1462 aaKnown RBP24.49■■□□□ 1.51
HSPG2-208ENST00000471322 SETD1AO15047 1707 aaKnown RBP24.49■■□□□ 1.51
HSPG2-208ENST00000471322 MIER1Q8N108 512 aa24.49■■□□□ 1.51
HSPG2-208ENST00000471322 HIRIP3Q9BW71 556 aaPredicted RBP24.49■■□□□ 1.51
HSPG2-208ENST00000471322 STK26Q9P289 416 aa24.48■■□□□ 1.51
HSPG2-208ENST00000471322 STAC3Q96MF2 364 aa24.47■■□□□ 1.51
HSPG2-208ENST00000471322 IQSEC2Q5JU85 1478 aa24.47■■□□□ 1.51
HSPG2-208ENST00000471322 NRXN1Q9ULB1 1477 aa24.47■■□□□ 1.51
HSPG2-208ENST00000471322 XIRP1Q702N8 1843 aaKnown RBP24.46■■□□□ 1.51
HSPG2-208ENST00000471322 C14orf37Q86TY3 774 aa24.46■■□□□ 1.51
HSPG2-208ENST00000471322 C14orf93Q9H972 538 aaKnown RBP24.46■■□□□ 1.51
HSPG2-208ENST00000471322 PIP4K2BP78356 416 aa24.44■■□□□ 1.5
HSPG2-208ENST00000471322 SCAF1Q9H7N4 1312 aaKnown RBP24.44■■□□□ 1.5
HSPG2-208ENST00000471322 RALGAPBQ86X10 1494 aa24.44■■□□□ 1.5
HSPG2-208ENST00000471322 XRN1Q8IZH2 1706 aaKnown RBP24.43■■□□□ 1.5
HSPG2-208ENST00000471322 DDX10Q13206 875 aaKnown RBP24.43■■□□□ 1.5
HSPG2-208ENST00000471322 ASXL1Q8IXJ9 1541 aa24.42■■□□□ 1.5
HSPG2-208ENST00000471322 ROBO2Q9HCK4 1378 aa24.41■■□□□ 1.5
HSPG2-208ENST00000471322 TOM1O60784 492 aa24.4■■□□□ 1.5
HSPG2-208ENST00000471322 PRAG1Q86YV5 1406 aa24.38■■□□□ 1.49
HSPG2-208ENST00000471322 MSH6P52701 1360 aa24.37■■□□□ 1.49
HSPG2-208ENST00000471322 WAPLQ7Z5K2 1190 aa24.36■■□□□ 1.49
HSPG2-208ENST00000471322 CARD11Q9BXL7 1154 aa24.36■■□□□ 1.49
HSPG2-208ENST00000471322 YTHDC2Q9H6S0 1430 aaKnown RBP24.36■■□□□ 1.49
HSPG2-208ENST00000471322 LRPPRCP42704 1394 aaKnown RBP24.35■■□□□ 1.49
HSPG2-208ENST00000471322 USP47Q96K76 1375 aa24.35■■□□□ 1.49
HSPG2-208ENST00000471322 LAMC1P11047 1609 aa24.34■■□□□ 1.49
HSPG2-208ENST00000471322 PTCH1Q13635 1447 aa24.33■■□□□ 1.49
HSPG2-208ENST00000471322 C19orf44Q9H6X5 657 aa24.32■■□□□ 1.48
HSPG2-208ENST00000471322 ROCK2O75116 1388 aaKnown RBP24.32■■□□□ 1.48
HSPG2-208ENST00000471322 NBPF1Q3BBV0 1214 aa24.32■■□□□ 1.48
HSPG2-208ENST00000471322 TRAK1Q9UPV9 953 aa24.32■■□□□ 1.48
HSPG2-208ENST00000471322 PLEKHH1Q9ULM0 1364 aa24.31■■□□□ 1.48
HSPG2-208ENST00000471322 WASHC2AQ641Q2 1341 aa24.31■■□□□ 1.48
HSPG2-208ENST00000471322 ADGRB1O14514 1584 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms