RNA–Protein interactions for RNA: ENST00000470838.1

CPA1-202, Transcript of carboxypeptidase A1, humanhuman

TSL 2

Gene CPA1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-202ENST00000470838 NKTRP30414 1462 aaKnown RBP28.28■■■□□ 2.12
CPA1-202ENST00000470838 PLEKHG1Q9ULL1 1385 aa28.28■■■□□ 2.12
CPA1-202ENST00000470838 NWD1Q149M9 1564 aa28.28■■■□□ 2.12
CPA1-202ENST00000470838 HDGFP51858 240 aaKnown RBP28.27■■■□□ 2.12
CPA1-202ENST00000470838 RBM33Q96EV2 1170 aaKnown RBP28.26■■■□□ 2.11
CPA1-202ENST00000470838 ROCK1Q13464 1354 aa28.25■■■□□ 2.11
CPA1-202ENST00000470838 TBX22Q9Y458 520 aa28.24■■■□□ 2.11
CPA1-202ENST00000470838 TMEM131LA2VDJ0 1609 aa28.23■■■□□ 2.11
CPA1-202ENST00000470838 RIMS2Q9UQ26 1411 aa28.23■■■□□ 2.11
CPA1-202ENST00000470838 UNC13BO14795 1591 aa28.22■■■□□ 2.11
CPA1-202ENST00000470838 BCANQ96GW7 911 aa28.2■■■□□ 2.1
CPA1-202ENST00000470838 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.19■■■□□ 2.1
CPA1-202ENST00000470838 SLAIN2Q9P270 581 aa28.19■■■□□ 2.1
CPA1-202ENST00000470838 GCC2Q8IWJ2 1684 aa28.18■■■□□ 2.1
CPA1-202ENST00000470838 MSH6P52701 1360 aa28.17■■■□□ 2.1
CPA1-202ENST00000470838 CHD2O14647 1828 aaKnown RBP28.17■■■□□ 2.1
CPA1-202ENST00000470838 NCOA3Q9Y6Q9 1424 aa28.17■■■□□ 2.1
CPA1-202ENST00000470838 ROBO1Q9Y6N7 1651 aa28.16■■■□□ 2.1
CPA1-202ENST00000470838 MYO5BQ9ULV0 1848 aa28.15■■■□□ 2.1
CPA1-202ENST00000470838 PPP1R15AO75807 674 aaPredicted RBP28.15■■■□□ 2.1
CPA1-202ENST00000470838 ADAMTS13Q76LX8 1427 aa28.14■■■□□ 2.1
CPA1-202ENST00000470838 E9PCH4 1651 aa28.13■■■□□ 2.09
CPA1-202ENST00000470838 PIK3R4Q99570 1358 aa28.11■■■□□ 2.09
CPA1-202ENST00000470838 IQGAP3Q86VI3 1631 aa28.11■■■□□ 2.09
CPA1-202ENST00000470838 NUP155O75694 1391 aa28.1■■■□□ 2.09
CPA1-202ENST00000470838 CHGAP10645 457 aaKnown RBP28.09■■■□□ 2.09
CPA1-202ENST00000470838 POTEAQ6S8J7 498 aa28.08■■■□□ 2.09
CPA1-202ENST00000470838 NUTM2DQ5VT03 806 aaPredicted RBP28.05■■■□□ 2.08
CPA1-202ENST00000470838 C19orf44Q9H6X5 657 aa28.04■■■□□ 2.08
CPA1-202ENST00000470838 DIP2AQ14689 1571 aa28.03■■■□□ 2.08
CPA1-202ENST00000470838 JCADQ9P266 1359 aa28.03■■■□□ 2.08
CPA1-202ENST00000470838 CADPS2Q86UW7 1296 aa28■■■□□ 2.07
CPA1-202ENST00000470838 AMOTL2Q9Y2J4 779 aa27.99■■■□□ 2.07
CPA1-202ENST00000470838 ITGAEP38570 1179 aa27.98■■■□□ 2.07
CPA1-202ENST00000470838 PTPRUQ92729 1446 aa27.98■■■□□ 2.07
CPA1-202ENST00000470838 PHLPP1O60346 1717 aa27.97■■■□□ 2.07
CPA1-202ENST00000470838 COL16A1Q07092 1604 aaPredicted RBP27.95■■■□□ 2.06
CPA1-202ENST00000470838 ATF3P18847 181 aa27.94■■■□□ 2.06
CPA1-202ENST00000470838 C14orf37Q86TY3 774 aa27.94■■■□□ 2.06
CPA1-202ENST00000470838 TRPM2O94759 1503 aa27.93■■■□□ 2.06
CPA1-202ENST00000470838 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.93■■■□□ 2.06
CPA1-202ENST00000470838 SPATA31A6Q5VVP1 1343 aa27.91■■■□□ 2.06
CPA1-202ENST00000470838 PPARGC1BQ86YN6 1023 aaKnown RBP27.9■■■□□ 2.06
CPA1-202ENST00000470838 SETBP1Q9Y6X0 1596 aa27.9■■■□□ 2.06
CPA1-202ENST00000470838 AHDC1Q5TGY3 1603 aaPredicted RBP27.89■■■□□ 2.06
CPA1-202ENST00000470838 DCCP43146 1447 aa27.88■■■□□ 2.05
CPA1-202ENST00000470838 NRXN3Q9Y4C0 1643 aa27.88■■■□□ 2.05
CPA1-202ENST00000470838 BRINP3Q76B58 766 aa27.87■■■□□ 2.05
CPA1-202ENST00000470838 METP08581 1390 aa27.85■■■□□ 2.05
CPA1-202ENST00000470838 SPHKAPQ2M3C7 1700 aa27.84■■■□□ 2.05
CPA1-202ENST00000470838 LRP6O75581 1613 aa27.84■■■□□ 2.05
CPA1-202ENST00000470838 XRN1Q8IZH2 1706 aaKnown RBP27.84■■■□□ 2.05
CPA1-202ENST00000470838 RRBP1Q9P2E9 1410 aaKnown RBP27.84■■■□□ 2.05
CPA1-202ENST00000470838 ZNF326Q5BKZ1 582 aaKnown RBP27.82■■■□□ 2.04
CPA1-202ENST00000470838 NAIPQ13075 1403 aa27.81■■■□□ 2.04
CPA1-202ENST00000470838 MST1RQ04912 1400 aa27.78■■■□□ 2.04
CPA1-202ENST00000470838 SHPRHQ149N8 1683 aa27.78■■■□□ 2.04
CPA1-202ENST00000470838 ZNF772Q68DY9 489 aaPredicted RBP27.77■■■□□ 2.04
CPA1-202ENST00000470838 NEXMIFQ5QGS0 1516 aa27.77■■■□□ 2.04
CPA1-202ENST00000470838 CLTCL1P53675 1640 aa27.76■■■□□ 2.03
CPA1-202ENST00000470838 SETD5Q9C0A6 1442 aa27.75■■■□□ 2.03
CPA1-202ENST00000470838 ASXL1Q8IXJ9 1541 aa27.73■■■□□ 2.03
CPA1-202ENST00000470838 ADGRL3Q9HAR2 1447 aa27.73■■■□□ 2.03
CPA1-202ENST00000470838 MEX3CQ5U5Q3 659 aaKnown RBP27.71■■■□□ 2.03
CPA1-202ENST00000470838 LRRC59Q96AG4 307 aaKnown RBP27.7■■■□□ 2.02
CPA1-202ENST00000470838 VGFO15240 615 aaPredicted RBP27.69■■■□□ 2.02
CPA1-202ENST00000470838 NHSL1Q5SYE7 1610 aa27.67■■■□□ 2.02
CPA1-202ENST00000470838 HFM1A2PYH4 1435 aa27.67■■■□□ 2.02
CPA1-202ENST00000470838 RPGRIP1LQ68CZ1 1315 aa27.67■■■□□ 2.02
CPA1-202ENST00000470838 PRAG1Q86YV5 1406 aa27.65■■■□□ 2.02
CPA1-202ENST00000470838 KIF1BO60333 1816 aa27.64■■■□□ 2.01
CPA1-202ENST00000470838 SETD1AO15047 1707 aaKnown RBP27.64■■■□□ 2.01
CPA1-202ENST00000470838 NUTM2BA6NNL0 878 aaPredicted RBP27.63■■■□□ 2.01
CPA1-202ENST00000470838 NUTM2EB1AL46 878 aaPredicted RBP27.63■■■□□ 2.01
CPA1-202ENST00000470838 NUTM2AQ8IVF1 878 aaPredicted RBP27.63■■■□□ 2.01
CPA1-202ENST00000470838 PTCH1Q13635 1447 aa27.63■■■□□ 2.01
CPA1-202ENST00000470838 RXRBP28702 533 aa27.62■■■□□ 2.01
CPA1-202ENST00000470838 DDX17Q92841 729 aaKnown RBP27.62■■■□□ 2.01
CPA1-202ENST00000470838 ROBO2Q9HCK4 1378 aa27.61■■■□□ 2.01
CPA1-202ENST00000470838 UPF1Q92900 1129 aaKnown RBP eCLIP27.61■■■□□ 2.01
CPA1-202ENST00000470838 TRIM52Q96A61 297 aa27.61■■■□□ 2.01
CPA1-202ENST00000470838 C1orf167Q5SNV9 1468 aa27.61■■■□□ 2.01
CPA1-202ENST00000470838 SLC4A1APQ9BWU0 796 aaKnown RBP27.6■■■□□ 2.01
CPA1-202ENST00000470838 NALCNQ8IZF0 1738 aa27.6■■■□□ 2.01
CPA1-202ENST00000470838 PNPLA6Q8IY17 1366 aa27.6■■■□□ 2.01
CPA1-202ENST00000470838 CDK12Q9NYV4 1490 aaPredicted RBP27.59■■■□□ 2.01
CPA1-202ENST00000470838 AFF2P51816 1311 aa27.59■■■□□ 2.01
CPA1-202ENST00000470838 LAMC1P11047 1609 aa27.56■■■□□ 2
CPA1-202ENST00000470838 SOS2Q07890 1332 aaPredicted RBP27.56■■■□□ 2
CPA1-202ENST00000470838 ORAI2Q96SN7 254 aa27.54■■■□□ 2
CPA1-202ENST00000470838 C8orf37Q96NL8 207 aa27.49■■□□□ 1.99
CPA1-202ENST00000470838 QTRT2Q9H974 415 aaKnown RBP27.49■■□□□ 1.99
CPA1-202ENST00000470838 RBM6P78332 1123 aaKnown RBP27.48■■□□□ 1.99
CPA1-202ENST00000470838 PPLO60437 1756 aa27.48■■□□□ 1.99
CPA1-202ENST00000470838 FOXD1Q16676 465 aa27.46■■□□□ 1.99
CPA1-202ENST00000470838 ADGRF5Q8IZF2 1346 aa27.44■■□□□ 1.98
CPA1-202ENST00000470838 SPATA31E1Q6ZUB1 1445 aa27.44■■□□□ 1.98
CPA1-202ENST00000470838 NGLY1Q96IV0 654 aa27.43■■□□□ 1.98
CPA1-202ENST00000470838 ADAMTS2O95450 1211 aa27.41■■□□□ 1.98
CPA1-202ENST00000470838 FNBP4Q8N3X1 1017 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms