RNA–Protein interactions for RNA: ENST00000470672.1

IMP4-212, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-212ENST00000470672 CHGAP10645 457 aaKnown RBP28.64■■■□□ 2.18
IMP4-212ENST00000470672 HDGFP51858 240 aaKnown RBP28.61■■■□□ 2.17
IMP4-212ENST00000470672 ANKRD30BQ9BXX2 1392 aa28.61■■■□□ 2.17
IMP4-212ENST00000470672 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.59■■■□□ 2.17
IMP4-212ENST00000470672 NEXMIFQ5QGS0 1516 aa28.56■■■□□ 2.16
IMP4-212ENST00000470672 SPATA31E1Q6ZUB1 1445 aa28.55■■■□□ 2.16
IMP4-212ENST00000470672 PLEKHG1Q9ULL1 1385 aa28.55■■■□□ 2.16
IMP4-212ENST00000470672 LTBP4Q8N2S1 1624 aa28.51■■■□□ 2.15
IMP4-212ENST00000470672 RPGRIP1LQ68CZ1 1315 aa28.51■■■□□ 2.15
IMP4-212ENST00000470672 ZNF326Q5BKZ1 582 aaKnown RBP28.51■■■□□ 2.15
IMP4-212ENST00000470672 PPLO60437 1756 aa28.5■■■□□ 2.15
IMP4-212ENST00000470672 PPP1R15AO75807 674 aaPredicted RBP28.5■■■□□ 2.15
IMP4-212ENST00000470672 IFT172Q9UG01 1749 aa28.47■■■□□ 2.15
IMP4-212ENST00000470672 DIP2AQ14689 1571 aa28.46■■■□□ 2.15
IMP4-212ENST00000470672 SETBP1Q9Y6X0 1596 aa28.45■■■□□ 2.15
IMP4-212ENST00000470672 ZNF335Q9H4Z2 1342 aaPredicted RBP28.45■■■□□ 2.15
IMP4-212ENST00000470672 DHX57Q6P158 1386 aaKnown RBP28.43■■■□□ 2.14
IMP4-212ENST00000470672 NRXN3Q9Y4C0 1643 aa28.43■■■□□ 2.14
IMP4-212ENST00000470672 ADAMTS13Q76LX8 1427 aa28.43■■■□□ 2.14
IMP4-212ENST00000470672 NUTM2DQ5VT03 806 aaPredicted RBP28.42■■■□□ 2.14
IMP4-212ENST00000470672 CPS1P31327 1500 aa28.42■■■□□ 2.14
IMP4-212ENST00000470672 VGFO15240 615 aaPredicted RBP28.41■■■□□ 2.14
IMP4-212ENST00000470672 STRCP1A6NGW2 1772 aa28.4■■■□□ 2.14
IMP4-212ENST00000470672 TBX22Q9Y458 520 aa28.4■■■□□ 2.14
IMP4-212ENST00000470672 SLC26A8Q96RN1 970 aa28.38■■■□□ 2.13
IMP4-212ENST00000470672 RGL3Q3MIN7 710 aa28.37■■■□□ 2.13
IMP4-212ENST00000470672 PCGF6Q9BYE7 350 aa28.37■■■□□ 2.13
IMP4-212ENST00000470672 NWD1Q149M9 1564 aa28.37■■■□□ 2.13
IMP4-212ENST00000470672 IQSEC2Q5JU85 1478 aa28.36■■■□□ 2.13
IMP4-212ENST00000470672 BCANQ96GW7 911 aa28.36■■■□□ 2.13
IMP4-212ENST00000470672 CHD2O14647 1828 aaKnown RBP28.36■■■□□ 2.13
IMP4-212ENST00000470672 PIK3R4Q99570 1358 aa28.36■■■□□ 2.13
IMP4-212ENST00000470672 CERKQ8TCT0 537 aa28.34■■■□□ 2.13
IMP4-212ENST00000470672 MYOM2P54296 1465 aa28.34■■■□□ 2.13
IMP4-212ENST00000470672 SETD1AO15047 1707 aaKnown RBP28.32■■■□□ 2.12
IMP4-212ENST00000470672 KCNA6P17658 529 aa28.31■■■□□ 2.12
IMP4-212ENST00000470672 NRXN1Q9ULB1 1477 aa28.3■■■□□ 2.12
IMP4-212ENST00000470672 NKTRP30414 1462 aaKnown RBP28.29■■■□□ 2.12
IMP4-212ENST00000470672 ALKQ9UM73 1620 aa28.28■■■□□ 2.12
IMP4-212ENST00000470672 PIK3C2GO75747 1445 aa28.27■■■□□ 2.12
IMP4-212ENST00000470672 ADGRF5Q8IZF2 1346 aa28.27■■■□□ 2.12
IMP4-212ENST00000470672 STAC3Q96MF2 364 aa28.27■■■□□ 2.12
IMP4-212ENST00000470672 SENP3Q9H4L4 574 aaPredicted RBP28.27■■■□□ 2.12
IMP4-212ENST00000470672 LRRC7Q96NW7 1537 aa28.26■■■□□ 2.11
IMP4-212ENST00000470672 XRN1Q8IZH2 1706 aaKnown RBP28.23■■■□□ 2.11
IMP4-212ENST00000470672 METP08581 1390 aa28.22■■■□□ 2.11
IMP4-212ENST00000470672 LAMC1P11047 1609 aa28.21■■■□□ 2.11
IMP4-212ENST00000470672 PTPRUQ92729 1446 aa28.21■■■□□ 2.11
IMP4-212ENST00000470672 XIRP1Q702N8 1843 aaKnown RBP28.21■■■□□ 2.11
IMP4-212ENST00000470672 PRAG1Q86YV5 1406 aa28.18■■■□□ 2.1
IMP4-212ENST00000470672 DCAF11Q8TEB1 546 aa28.17■■■□□ 2.1
IMP4-212ENST00000470672 SIN3AQ96ST3 1273 aa28.16■■■□□ 2.1
IMP4-212ENST00000470672 AMOTL2Q9Y2J4 779 aa28.15■■■□□ 2.1
IMP4-212ENST00000470672 ASXL1Q8IXJ9 1541 aa28.13■■■□□ 2.09
IMP4-212ENST00000470672 NCOA3Q9Y6Q9 1424 aa28.13■■■□□ 2.09
IMP4-212ENST00000470672 C14orf93Q9H972 538 aaKnown RBP28.13■■■□□ 2.09
IMP4-212ENST00000470672 TMEM94Q12767 1356 aa28.12■■■□□ 2.09
IMP4-212ENST00000470672 PROSER2Q86WR7 435 aaPredicted RBP28.12■■■□□ 2.09
IMP4-212ENST00000470672 FBXO41Q8TF61 875 aa28.11■■■□□ 2.09
IMP4-212ENST00000470672 PTCH1Q13635 1447 aa28.1■■■□□ 2.09
IMP4-212ENST00000470672 KDM2AQ9Y2K7 1162 aa28.1■■■□□ 2.09
IMP4-212ENST00000470672 CLSPNQ9HAW4 1339 aa28.1■■■□□ 2.09
IMP4-212ENST00000470672 NEUROD1Q13562 356 aa28.08■■■□□ 2.09
IMP4-212ENST00000470672 KNDC1Q76NI1 1749 aa28.08■■■□□ 2.09
IMP4-212ENST00000470672 KIAA1210Q9ULL0 1709 aa28.07■■■□□ 2.08
IMP4-212ENST00000470672 TECPR2O15040 1411 aa28.07■■■□□ 2.08
IMP4-212ENST00000470672 CFAP70Q5T0N1 1121 aa28.06■■■□□ 2.08
IMP4-212ENST00000470672 L3MBTL2Q969R5 705 aa28.06■■■□□ 2.08
IMP4-212ENST00000470672 LRPPRCP42704 1394 aaKnown RBP28.06■■■□□ 2.08
IMP4-212ENST00000470672 ADGRB1O14514 1584 aa28.04■■■□□ 2.08
IMP4-212ENST00000470672 ABCC11Q96J66 1382 aa28.03■■■□□ 2.08
IMP4-212ENST00000470672 YTHDC2Q9H6S0 1430 aaKnown RBP28.02■■■□□ 2.08
IMP4-212ENST00000470672 ROBO2Q9HCK4 1378 aa28■■■□□ 2.07
IMP4-212ENST00000470672 TMEM132EQ6IEE7 984 aa28■■■□□ 2.07
IMP4-212ENST00000470672 MSH6P52701 1360 aa27.99■■■□□ 2.07
IMP4-212ENST00000470672 UBAP1LF5GYI3 381 aa27.99■■■□□ 2.07
IMP4-212ENST00000470672 TOM1O60784 492 aa27.99■■■□□ 2.07
IMP4-212ENST00000470672 RBM33Q96EV2 1170 aaKnown RBP27.98■■■□□ 2.07
IMP4-212ENST00000470672 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
IMP4-212ENST00000470672 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.97■■■□□ 2.07
IMP4-212ENST00000470672 DCCP43146 1447 aa27.96■■■□□ 2.07
IMP4-212ENST00000470672 DLC1Q96QB1 1528 aa27.96■■■□□ 2.07
IMP4-212ENST00000470672 NALCNQ8IZF0 1738 aa27.95■■■□□ 2.07
IMP4-212ENST00000470672 FAM135BQ49AJ0 1406 aa27.95■■■□□ 2.07
IMP4-212ENST00000470672 ADGRL3Q9HAR2 1447 aa27.95■■■□□ 2.07
IMP4-212ENST00000470672 SIRT1Q96EB6 747 aa27.95■■■□□ 2.06
IMP4-212ENST00000470672 C19orf44Q9H6X5 657 aa27.95■■■□□ 2.06
IMP4-212ENST00000470672 ILDR1Q86SU0 546 aaPredicted RBP27.93■■■□□ 2.06
IMP4-212ENST00000470672 TRPM1Q7Z4N2 1603 aa27.92■■■□□ 2.06
IMP4-212ENST00000470672 STK26Q9P289 416 aa27.92■■■□□ 2.06
IMP4-212ENST00000470672 C14orf37Q86TY3 774 aa27.91■■■□□ 2.06
IMP4-212ENST00000470672 CADPS2Q86UW7 1296 aa27.88■■■□□ 2.05
IMP4-212ENST00000470672 CCER1Q8TC90 406 aaPredicted RBP27.88■■■□□ 2.05
IMP4-212ENST00000470672 TIMELESSQ9UNS1 1208 aa27.87■■■□□ 2.05
IMP4-212ENST00000470672 ARHGEF28Q8N1W1 1705 aaKnown RBP27.86■■■□□ 2.05
IMP4-212ENST00000470672 CDC42BPGQ6DT37 1551 aa27.84■■■□□ 2.05
IMP4-212ENST00000470672 PLEKHH1Q9ULM0 1364 aa27.84■■■□□ 2.05
IMP4-212ENST00000470672 ATF3P18847 181 aa27.83■■■□□ 2.05
IMP4-212ENST00000470672 NBPF1Q3BBV0 1214 aa27.83■■■□□ 2.05
IMP4-212ENST00000470672 WAPLQ7Z5K2 1190 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms