RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 NAP1L2Q9ULW6 460 aaPredicted RBP11.87□□□□□ -0.51
UBE3C-205ENST00000470408 GOLGA6L4A6NEF3 574 aa11.87□□□□□ -0.51
UBE3C-205ENST00000470408 MAP3K1Q13233 1512 aa11.87□□□□□ -0.51
UBE3C-205ENST00000470408 CHMP3Q9Y3E7 222 aa11.87□□□□□ -0.51
UBE3C-205ENST00000470408 DAPK1P53355 1430 aa11.87□□□□□ -0.51
UBE3C-205ENST00000470408 TCERG1O14776 1098 aaKnown RBP11.86□□□□□ -0.51
UBE3C-205ENST00000470408 PLB1Q6P1J6 1458 aa11.86□□□□□ -0.51
UBE3C-205ENST00000470408 GOLGA6L6A8MZA4 724 aa11.86□□□□□ -0.51
UBE3C-205ENST00000470408 NRDCO43847 1150 aa11.86□□□□□ -0.51
UBE3C-205ENST00000470408 HTATSF1O43719 755 aaKnown RBP11.85□□□□□ -0.51
UBE3C-205ENST00000470408 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
UBE3C-205ENST00000470408 API5Q9BZZ5 524 aaKnown RBP11.85□□□□□ -0.51
UBE3C-205ENST00000470408 RAPGEF3O95398 923 aa11.85□□□□□ -0.51
UBE3C-205ENST00000470408 PTMSP20962 102 aa11.85□□□□□ -0.51
UBE3C-205ENST00000470408 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
UBE3C-205ENST00000470408 MSNP26038 577 aaKnown RBP11.85□□□□□ -0.51
UBE3C-205ENST00000470408 GNAI1P63096 354 aa11.84□□□□□ -0.51
UBE3C-205ENST00000470408 RUNDC1Q96C34 613 aa11.84□□□□□ -0.51
UBE3C-205ENST00000470408 NLRP6P59044 892 aa11.84□□□□□ -0.51
UBE3C-205ENST00000470408 ZKSCAN2Q63HK3 967 aa11.84□□□□□ -0.51
UBE3C-205ENST00000470408 CCDC7Q96M83 1385 aa11.83□□□□□ -0.52
UBE3C-205ENST00000470408 HSP90B1P14625 803 aaKnown RBP11.83□□□□□ -0.52
UBE3C-205ENST00000470408 AAMPQ13685 434 aa11.83□□□□□ -0.52
UBE3C-205ENST00000470408 KIF14Q15058 1648 aa11.83□□□□□ -0.52
UBE3C-205ENST00000470408 CNTLNQ9NXG0 1405 aa11.82□□□□□ -0.52
UBE3C-205ENST00000470408 CFAP70Q5T0N1 1121 aa11.82□□□□□ -0.52
UBE3C-205ENST00000470408 WWC1Q8IX03 1113 aa11.82□□□□□ -0.52
UBE3C-205ENST00000470408 CHAF1AQ13111 956 aaPredicted RBP11.82□□□□□ -0.52
UBE3C-205ENST00000470408 AKNAQ7Z591 1439 aa11.82□□□□□ -0.52
UBE3C-205ENST00000470408 ADGRL1O94910 1474 aa11.82□□□□□ -0.52
UBE3C-205ENST00000470408 CCDC34Q96HJ3 373 aa11.82□□□□□ -0.52
UBE3C-205ENST00000470408 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
UBE3C-205ENST00000470408 DENND4BO75064 1496 aaPredicted RBP11.81□□□□□ -0.52
UBE3C-205ENST00000470408 ATAD2Q6PL18 1390 aa11.81□□□□□ -0.52
UBE3C-205ENST00000470408 IPO9Q96P70 1041 aaKnown RBP11.81□□□□□ -0.52
UBE3C-205ENST00000470408 GNL2Q13823 731 aaKnown RBP11.81□□□□□ -0.52
UBE3C-205ENST00000470408 ISY1Q9ULR0 285 aaKnown RBP11.81□□□□□ -0.52
UBE3C-205ENST00000470408 KIF3AQ9Y496 699 aa11.81□□□□□ -0.52
UBE3C-205ENST00000470408 SMG6Q86US8 1419 aaKnown RBP11.81□□□□□ -0.52
UBE3C-205ENST00000470408 APBB1O00213 710 aa11.8□□□□□ -0.52
UBE3C-205ENST00000470408 FRAT2O75474 233 aaPredicted RBP11.8□□□□□ -0.52
UBE3C-205ENST00000470408 ZBED9Q6R2W3 1325 aa11.8□□□□□ -0.52
UBE3C-205ENST00000470408 BIVM-ERCC5R4GMW8 1640 aa11.8□□□□□ -0.52
UBE3C-205ENST00000470408 TMEM132EQ6IEE7 984 aa11.8□□□□□ -0.52
UBE3C-205ENST00000470408 NLRP2Q9NX02 1062 aa11.8□□□□□ -0.52
UBE3C-205ENST00000470408 RIPK4P57078 832 aa11.8□□□□□ -0.52
UBE3C-205ENST00000470408 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
UBE3C-205ENST00000470408 PLEKHO1Q53GL0 409 aaPredicted RBP11.79□□□□□ -0.52
UBE3C-205ENST00000470408 USP35Q9P2H5 1018 aa11.79□□□□□ -0.52
UBE3C-205ENST00000470408 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
UBE3C-205ENST00000470408 TEX14Q8IWB6 1497 aa11.79□□□□□ -0.52
UBE3C-205ENST00000470408 ABTB2Q8N961 1025 aa11.79□□□□□ -0.52
UBE3C-205ENST00000470408 PRAM1Q96QH2 718 aa11.79□□□□□ -0.52
UBE3C-205ENST00000470408 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
UBE3C-205ENST00000470408 KIF7Q2M1P5 1343 aa11.79□□□□□ -0.52
UBE3C-205ENST00000470408 HSP90AB4PQ58FF6 505 aa11.78□□□□□ -0.52
UBE3C-205ENST00000470408 KIF16BQ96L93 1317 aa11.78□□□□□ -0.52
UBE3C-205ENST00000470408 DDX19BQ9UMR2 479 aa11.78□□□□□ -0.52
UBE3C-205ENST00000470408 BRD4O60885 1362 aaPredicted RBP11.78□□□□□ -0.52
UBE3C-205ENST00000470408 CDK13Q14004 1512 aaKnown RBP11.78□□□□□ -0.52
UBE3C-205ENST00000470408 APAF1O14727 1248 aa11.77□□□□□ -0.52
UBE3C-205ENST00000470408 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.52
UBE3C-205ENST00000470408 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
UBE3C-205ENST00000470408 ERBINQ96RT1 1412 aa11.77□□□□□ -0.52
UBE3C-205ENST00000470408 TRIM6-TRIM34B2RNG4 842 aa11.77□□□□□ -0.52
UBE3C-205ENST00000470408 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.53
UBE3C-205ENST00000470408 RRP7AQ9Y3A4 280 aaKnown RBP11.77□□□□□ -0.53
UBE3C-205ENST00000470408 ZNF608Q9ULD9 1512 aaPredicted RBP11.76□□□□□ -0.53
UBE3C-205ENST00000470408 CLUAP1Q96AJ1 413 aa11.76□□□□□ -0.53
UBE3C-205ENST00000470408 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
UBE3C-205ENST00000470408 UNC13AQ9UPW8 1703 aa11.76□□□□□ -0.53
UBE3C-205ENST00000470408 PNISRQ8TF01 805 aaKnown RBP11.75□□□□□ -0.53
UBE3C-205ENST00000470408 GGNBP2Q9H3C7 697 aa11.75□□□□□ -0.53
UBE3C-205ENST00000470408 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
UBE3C-205ENST00000470408 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
UBE3C-205ENST00000470408 TSPYL4Q9UJ04 414 aa11.75□□□□□ -0.53
UBE3C-205ENST00000470408 CAMSAP2Q08AD1 1489 aa11.75□□□□□ -0.53
UBE3C-205ENST00000470408 AMOTL1Q8IY63 956 aa11.75□□□□□ -0.53
UBE3C-205ENST00000470408 MSH5O43196 834 aa11.74□□□□□ -0.53
UBE3C-205ENST00000470408 TATP17735 454 aaPredicted RBP11.74□□□□□ -0.53
UBE3C-205ENST00000470408 CENPQQ7L2Z9 268 aaPredicted RBP11.74□□□□□ -0.53
UBE3C-205ENST00000470408 RUFY2Q8WXA3 655 aa11.74□□□□□ -0.53
UBE3C-205ENST00000470408 GBP4Q96PP9 640 aa11.74□□□□□ -0.53
UBE3C-205ENST00000470408 CDK19Q9BWU1 502 aa11.74□□□□□ -0.53
UBE3C-205ENST00000470408 CSPP1Q1MSJ5 1256 aa11.74□□□□□ -0.53
UBE3C-205ENST00000470408 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
UBE3C-205ENST00000470408 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
UBE3C-205ENST00000470408 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
UBE3C-205ENST00000470408 FANCAO15360 1455 aa11.73□□□□□ -0.53
UBE3C-205ENST00000470408 FANCIQ9NVI1 1328 aa11.72□□□□□ -0.53
UBE3C-205ENST00000470408 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
UBE3C-205ENST00000470408 CCDC61Q9Y6R9 512 aa11.72□□□□□ -0.53
UBE3C-205ENST00000470408 PCF11O94913 1555 aaKnown RBP11.72□□□□□ -0.53
UBE3C-205ENST00000470408 ELL2O00472 640 aaPredicted RBP11.72□□□□□ -0.53
UBE3C-205ENST00000470408 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
UBE3C-205ENST00000470408 DHX29Q7Z478 1369 aaKnown RBP11.71□□□□□ -0.53
UBE3C-205ENST00000470408 GOLGA6L3A6NEY3 463 aa11.71□□□□□ -0.53
UBE3C-205ENST00000470408 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
UBE3C-205ENST00000470408 FKBP5Q13451 457 aaPredicted RBP11.71□□□□□ -0.53
UBE3C-205ENST00000470408 DZIP1LQ8IYY4 767 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms