RNA–Protein interactions for RNA: ENST00000470399.1

TTC19-204, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 5

Gene TTC19, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-204ENST00000470399 UNC13BO14795 1591 aa38.17■■■■□ 3.7
TTC19-204ENST00000470399 CHD2O14647 1828 aaKnown RBP38.17■■■■□ 3.7
TTC19-204ENST00000470399 FAM50AQ14320 339 aaKnown RBP38.16■■■■□ 3.7
TTC19-204ENST00000470399 RBM33Q96EV2 1170 aaKnown RBP38.16■■■■□ 3.7
TTC19-204ENST00000470399 TMEM131LA2VDJ0 1609 aa38.16■■■■□ 3.7
TTC19-204ENST00000470399 SLC52A1Q9NWF4 448 aa38.15■■■■□ 3.7
TTC19-204ENST00000470399 RGS17Q9UGC6 210 aaPredicted RBP38.15■■■■□ 3.7
TTC19-204ENST00000470399 NKTRP30414 1462 aaKnown RBP38.14■■■■□ 3.7
TTC19-204ENST00000470399 E9PCH4 1651 aa38.11■■■■□ 3.69
TTC19-204ENST00000470399 PROSER2Q86WR7 435 aaPredicted RBP38.09■■■■□ 3.69
TTC19-204ENST00000470399 RIMS2Q9UQ26 1411 aa38.04■■■■□ 3.68
TTC19-204ENST00000470399 PLEKHG1Q9ULL1 1385 aa38.04■■■■□ 3.68
TTC19-204ENST00000470399 IQGAP3Q86VI3 1631 aa38.01■■■■□ 3.67
TTC19-204ENST00000470399 PHLPP1O60346 1717 aa37.96■■■■□ 3.67
TTC19-204ENST00000470399 BCANQ96GW7 911 aa37.95■■■■□ 3.67
TTC19-204ENST00000470399 MSH6P52701 1360 aa37.93■■■■□ 3.66
TTC19-204ENST00000470399 ADAMTS13Q76LX8 1427 aa37.93■■■■□ 3.66
TTC19-204ENST00000470399 ROCK1Q13464 1354 aa37.91■■■■□ 3.66
TTC19-204ENST00000470399 PPP1R15AO75807 674 aaPredicted RBP37.87■■■■□ 3.65
TTC19-204ENST00000470399 POTEAQ6S8J7 498 aa37.87■■■■□ 3.65
TTC19-204ENST00000470399 COL16A1Q07092 1604 aaPredicted RBP37.87■■■■□ 3.65
TTC19-204ENST00000470399 SLAIN2Q9P270 581 aa37.86■■■■□ 3.65
TTC19-204ENST00000470399 TBX22Q9Y458 520 aa37.86■■■■□ 3.65
TTC19-204ENST00000470399 DIP2AQ14689 1571 aa37.85■■■■□ 3.65
TTC19-204ENST00000470399 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.85■■■■□ 3.65
TTC19-204ENST00000470399 NUTM2DQ5VT03 806 aaPredicted RBP37.85■■■■□ 3.65
TTC19-204ENST00000470399 CHGAP10645 457 aaKnown RBP37.82■■■■□ 3.64
TTC19-204ENST00000470399 HDGFP51858 240 aaKnown RBP37.8■■■■□ 3.64
TTC19-204ENST00000470399 NRXN3Q9Y4C0 1643 aa37.79■■■■□ 3.64
TTC19-204ENST00000470399 NCOA3Q9Y6Q9 1424 aa37.78■■■■□ 3.64
TTC19-204ENST00000470399 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.78■■■■□ 3.64
TTC19-204ENST00000470399 SPHKAPQ2M3C7 1700 aa37.76■■■■□ 3.64
TTC19-204ENST00000470399 PTPRUQ92729 1446 aa37.76■■■■□ 3.63
TTC19-204ENST00000470399 NUP155O75694 1391 aa37.75■■■■□ 3.63
TTC19-204ENST00000470399 SETD1AO15047 1707 aaKnown RBP37.75■■■■□ 3.63
TTC19-204ENST00000470399 JCADQ9P266 1359 aa37.73■■■■□ 3.63
TTC19-204ENST00000470399 TRPM2O94759 1503 aa37.72■■■■□ 3.63
TTC19-204ENST00000470399 PIK3R4Q99570 1358 aa37.72■■■■□ 3.63
TTC19-204ENST00000470399 AHDC1Q5TGY3 1603 aaPredicted RBP37.7■■■■□ 3.63
TTC19-204ENST00000470399 XRN1Q8IZH2 1706 aaKnown RBP37.7■■■■□ 3.63
TTC19-204ENST00000470399 LRP6O75581 1613 aa37.69■■■■□ 3.62
TTC19-204ENST00000470399 ITGAEP38570 1179 aa37.67■■■■□ 3.62
TTC19-204ENST00000470399 SHPRHQ149N8 1683 aa37.66■■■■□ 3.62
TTC19-204ENST00000470399 SETBP1Q9Y6X0 1596 aa37.65■■■■□ 3.62
TTC19-204ENST00000470399 PPARGC1BQ86YN6 1023 aaKnown RBP37.62■■■■□ 3.61
TTC19-204ENST00000470399 C19orf44Q9H6X5 657 aa37.62■■■■□ 3.61
TTC19-204ENST00000470399 C14orf37Q86TY3 774 aa37.61■■■■□ 3.61
TTC19-204ENST00000470399 AMOTL2Q9Y2J4 779 aa37.61■■■■□ 3.61
TTC19-204ENST00000470399 CLTCL1P53675 1640 aa37.58■■■■□ 3.61
TTC19-204ENST00000470399 CADPS2Q86UW7 1296 aa37.58■■■■□ 3.61
TTC19-204ENST00000470399 NEXMIFQ5QGS0 1516 aa37.53■■■■□ 3.6
TTC19-204ENST00000470399 ATF3P18847 181 aa37.53■■■■□ 3.6
TTC19-204ENST00000470399 BRINP3Q76B58 766 aa37.51■■■■□ 3.6
TTC19-204ENST00000470399 SPATA31A6Q5VVP1 1343 aa37.51■■■■□ 3.6
TTC19-204ENST00000470399 DCCP43146 1447 aa37.51■■■■□ 3.59
TTC19-204ENST00000470399 NHSL1Q5SYE7 1610 aa37.5■■■■□ 3.59
TTC19-204ENST00000470399 METP08581 1390 aa37.5■■■■□ 3.59
TTC19-204ENST00000470399 ASXL1Q8IXJ9 1541 aa37.49■■■■□ 3.59
TTC19-204ENST00000470399 KIF1BO60333 1816 aa37.48■■■■□ 3.59
TTC19-204ENST00000470399 NALCNQ8IZF0 1738 aa37.48■■■■□ 3.59
TTC19-204ENST00000470399 MST1RQ04912 1400 aa37.47■■■■□ 3.59
TTC19-204ENST00000470399 ZNF326Q5BKZ1 582 aaKnown RBP37.41■■■■□ 3.58
TTC19-204ENST00000470399 RRBP1Q9P2E9 1410 aaKnown RBP37.41■■■■□ 3.58
TTC19-204ENST00000470399 NAIPQ13075 1403 aa37.4■■■■□ 3.58
TTC19-204ENST00000470399 SETD5Q9C0A6 1442 aa37.36■■■■□ 3.57
TTC19-204ENST00000470399 ADGRL3Q9HAR2 1447 aa37.36■■■■□ 3.57
TTC19-204ENST00000470399 MEX3CQ5U5Q3 659 aaKnown RBP37.36■■■■□ 3.57
TTC19-204ENST00000470399 ZNF772Q68DY9 489 aaPredicted RBP37.32■■■■□ 3.56
TTC19-204ENST00000470399 DDX17Q92841 729 aaKnown RBP37.29■■■■□ 3.56
TTC19-204ENST00000470399 NUTM2BA6NNL0 878 aaPredicted RBP37.27■■■■□ 3.56
TTC19-204ENST00000470399 NUTM2EB1AL46 878 aaPredicted RBP37.27■■■■□ 3.56
TTC19-204ENST00000470399 NUTM2AQ8IVF1 878 aaPredicted RBP37.27■■■■□ 3.56
TTC19-204ENST00000470399 PPLO60437 1756 aa37.27■■■■□ 3.56
TTC19-204ENST00000470399 LAMC1P11047 1609 aa37.26■■■■□ 3.56
TTC19-204ENST00000470399 TRIM52Q96A61 297 aa37.25■■■■□ 3.55
TTC19-204ENST00000470399 PTCH1Q13635 1447 aa37.22■■■■□ 3.55
TTC19-204ENST00000470399 PNPLA6Q8IY17 1366 aa37.21■■■■□ 3.55
TTC19-204ENST00000470399 C1orf167Q5SNV9 1468 aa37.2■■■■□ 3.55
TTC19-204ENST00000470399 UPF1Q92900 1129 aaKnown RBP eCLIP37.2■■■■□ 3.55
TTC19-204ENST00000470399 ROBO2Q9HCK4 1378 aa37.19■■■■□ 3.54
TTC19-204ENST00000470399 AFF2P51816 1311 aa37.19■■■■□ 3.54
TTC19-204ENST00000470399 HFM1A2PYH4 1435 aa37.18■■■■□ 3.54
TTC19-204ENST00000470399 PRAG1Q86YV5 1406 aa37.18■■■■□ 3.54
TTC19-204ENST00000470399 LRRC59Q96AG4 307 aaKnown RBP37.17■■■■□ 3.54
TTC19-204ENST00000470399 CDK12Q9NYV4 1490 aaPredicted RBP37.17■■■■□ 3.54
TTC19-204ENST00000470399 RXRBP28702 533 aa37.15■■■■□ 3.54
TTC19-204ENST00000470399 VGFO15240 615 aaPredicted RBP37.09■■■■□ 3.53
TTC19-204ENST00000470399 ORAI2Q96SN7 254 aa37.07■■■■□ 3.52
TTC19-204ENST00000470399 RGS12O14924 1447 aa37.06■■■■□ 3.52
TTC19-204ENST00000470399 C8orf37Q96NL8 207 aa37.06■■■■□ 3.52
TTC19-204ENST00000470399 RPGRIP1LQ68CZ1 1315 aa37.05■■■■□ 3.52
TTC19-204ENST00000470399 IFT172Q9UG01 1749 aa37.04■■■■□ 3.52
TTC19-204ENST00000470399 SOS2Q07890 1332 aaPredicted RBP37.04■■■■□ 3.52
TTC19-204ENST00000470399 SLC4A1APQ9BWU0 796 aaKnown RBP37.03■■■■□ 3.52
TTC19-204ENST00000470399 COL22A1Q8NFW1 1626 aaPredicted RBP37.01■■■■□ 3.52
TTC19-204ENST00000470399 FOXD1Q16676 465 aa36.99■■■■□ 3.51
TTC19-204ENST00000470399 CDC42BPGQ6DT37 1551 aa36.99■■■■□ 3.51
TTC19-204ENST00000470399 QTRT2Q9H974 415 aaKnown RBP36.97■■■■□ 3.51
TTC19-204ENST00000470399 ADAMTS2O95450 1211 aa36.95■■■■□ 3.51
TTC19-204ENST00000470399 RBM6P78332 1123 aaKnown RBP36.94■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms