RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 MSH6P52701 1360 aa14.38□□□□□ -0.11
CCDC171-204ENST00000470191 ADGRB3O60242 1522 aa14.38□□□□□ -0.11
CCDC171-204ENST00000470191 LOC105371045A0A1W2PR82 267 aa14.38□□□□□ -0.11
CCDC171-204ENST00000470191 CHD2O14647 1828 aaKnown RBP14.38□□□□□ -0.11
CCDC171-204ENST00000470191 NWD1Q149M9 1564 aa14.38□□□□□ -0.11
CCDC171-204ENST00000470191 GCC2Q8IWJ2 1684 aa14.37□□□□□ -0.11
CCDC171-204ENST00000470191 SLAIN2Q9P270 581 aa14.37□□□□□ -0.11
CCDC171-204ENST00000470191 DAPK1P53355 1430 aa14.36□□□□□ -0.11
CCDC171-204ENST00000470191 NKTRP30414 1462 aaKnown RBP14.36□□□□□ -0.11
CCDC171-204ENST00000470191 COL16A1Q07092 1604 aaPredicted RBP14.35□□□□□ -0.11
CCDC171-204ENST00000470191 MEX3CQ5U5Q3 659 aaKnown RBP14.35□□□□□ -0.11
CCDC171-204ENST00000470191 TRIM52Q96A61 297 aa14.35□□□□□ -0.11
CCDC171-204ENST00000470191 JCADQ9P266 1359 aa14.34□□□□□ -0.11
CCDC171-204ENST00000470191 C14orf37Q86TY3 774 aa14.34□□□□□ -0.11
CCDC171-204ENST00000470191 LMTK2Q8IWU2 1503 aa14.33□□□□□ -0.12
CCDC171-204ENST00000470191 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
CCDC171-204ENST00000470191 PPP1R15AO75807 674 aaPredicted RBP14.33□□□□□ -0.12
CCDC171-204ENST00000470191 LRP6O75581 1613 aa14.32□□□□□ -0.12
CCDC171-204ENST00000470191 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
CCDC171-204ENST00000470191 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.31□□□□□ -0.12
CCDC171-204ENST00000470191 ANKRD30AQ9BXX3 1397 aa14.31□□□□□ -0.12
CCDC171-204ENST00000470191 NOS1P29475 1434 aa14.31□□□□□ -0.12
CCDC171-204ENST00000470191 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
CCDC171-204ENST00000470191 RIMS2Q9UQ26 1411 aa14.3□□□□□ -0.12
CCDC171-204ENST00000470191 APLP2Q06481 763 aa14.29□□□□□ -0.12
CCDC171-204ENST00000470191 FGD6Q6ZV73 1430 aa14.29□□□□□ -0.12
CCDC171-204ENST00000470191 SHPRHQ149N8 1683 aa14.29□□□□□ -0.12
CCDC171-204ENST00000470191 TMEM131LA2VDJ0 1609 aa14.28□□□□□ -0.12
CCDC171-204ENST00000470191 NUTM2BA6NNL0 878 aaPredicted RBP14.28□□□□□ -0.12
CCDC171-204ENST00000470191 NUTM2EB1AL46 878 aaPredicted RBP14.28□□□□□ -0.12
CCDC171-204ENST00000470191 NUTM2AQ8IVF1 878 aaPredicted RBP14.28□□□□□ -0.12
CCDC171-204ENST00000470191 UPF1Q92900 1129 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC171-204ENST00000470191 ZFYVE9O95405 1425 aa14.27□□□□□ -0.12
CCDC171-204ENST00000470191 PLEKHG1Q9ULL1 1385 aa14.27□□□□□ -0.12
CCDC171-204ENST00000470191 SLC52A1Q9NWF4 448 aa14.27□□□□□ -0.13
CCDC171-204ENST00000470191 SPATA31A6Q5VVP1 1343 aa14.25□□□□□ -0.13
CCDC171-204ENST00000470191 ZNF772Q68DY9 489 aaPredicted RBP14.25□□□□□ -0.13
CCDC171-204ENST00000470191 AHDC1Q5TGY3 1603 aaPredicted RBP14.24□□□□□ -0.13
CCDC171-204ENST00000470191 ATF3P18847 181 aa14.24□□□□□ -0.13
CCDC171-204ENST00000470191 HDGFP51858 240 aaKnown RBP14.24□□□□□ -0.13
CCDC171-204ENST00000470191 FAM50AQ14320 339 aaKnown RBP14.24□□□□□ -0.13
CCDC171-204ENST00000470191 E9PCH4 1651 aa14.23□□□□□ -0.13
CCDC171-204ENST00000470191 RXRBP28702 533 aa14.22□□□□□ -0.13
CCDC171-204ENST00000470191 TBX22Q9Y458 520 aa14.22□□□□□ -0.13
CCDC171-204ENST00000470191 RPRD2Q5VT52 1461 aaKnown RBP14.22□□□□□ -0.13
CCDC171-204ENST00000470191 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
CCDC171-204ENST00000470191 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
CCDC171-204ENST00000470191 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
CCDC171-204ENST00000470191 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCDC171-204ENST00000470191 C19orf44Q9H6X5 657 aa14.2□□□□□ -0.14
CCDC171-204ENST00000470191 ADAMTS13Q76LX8 1427 aa14.2□□□□□ -0.14
CCDC171-204ENST00000470191 ANKRD50Q9ULJ7 1429 aa14.2□□□□□ -0.14
CCDC171-204ENST00000470191 DIP2AQ14689 1571 aa14.2□□□□□ -0.14
CCDC171-204ENST00000470191 AFF2P51816 1311 aa14.19□□□□□ -0.14
CCDC171-204ENST00000470191 BRINP3Q76B58 766 aa14.19□□□□□ -0.14
CCDC171-204ENST00000470191 TRPM2O94759 1503 aa14.19□□□□□ -0.14
CCDC171-204ENST00000470191 NCOA3Q9Y6Q9 1424 aa14.18□□□□□ -0.14
CCDC171-204ENST00000470191 AMOTL2Q9Y2J4 779 aa14.18□□□□□ -0.14
CCDC171-204ENST00000470191 UNC13BO14795 1591 aa14.17□□□□□ -0.14
CCDC171-204ENST00000470191 PTPRUQ92729 1446 aa14.16□□□□□ -0.14
CCDC171-204ENST00000470191 NHSL1Q5SYE7 1610 aa14.16□□□□□ -0.14
CCDC171-204ENST00000470191 DDX17Q92841 729 aaKnown RBP14.16□□□□□ -0.14
CCDC171-204ENST00000470191 C8orf37Q96NL8 207 aa14.16□□□□□ -0.14
CCDC171-204ENST00000470191 ASXL1Q8IXJ9 1541 aa14.15□□□□□ -0.14
CCDC171-204ENST00000470191 CDK12Q9NYV4 1490 aaPredicted RBP14.13□□□□□ -0.15
CCDC171-204ENST00000470191 XRN1Q8IZH2 1706 aaKnown RBP14.13□□□□□ -0.15
CCDC171-204ENST00000470191 PIK3R4Q99570 1358 aa14.13□□□□□ -0.15
CCDC171-204ENST00000470191 IQGAP3Q86VI3 1631 aa14.13□□□□□ -0.15
CCDC171-204ENST00000470191 QTRT2Q9H974 415 aaKnown RBP14.13□□□□□ -0.15
CCDC171-204ENST00000470191 RGS12O14924 1447 aa14.13□□□□□ -0.15
CCDC171-204ENST00000470191 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
CCDC171-204ENST00000470191 NALCNQ8IZF0 1738 aa14.12□□□□□ -0.15
CCDC171-204ENST00000470191 MST1RQ04912 1400 aa14.11□□□□□ -0.15
CCDC171-204ENST00000470191 SETD5Q9C0A6 1442 aa14.1□□□□□ -0.15
CCDC171-204ENST00000470191 ADAMTS2O95450 1211 aa14.1□□□□□ -0.15
CCDC171-204ENST00000470191 ZNF326Q5BKZ1 582 aaKnown RBP14.1□□□□□ -0.15
CCDC171-204ENST00000470191 LRRC59Q96AG4 307 aaKnown RBP14.1□□□□□ -0.15
CCDC171-204ENST00000470191 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
CCDC171-204ENST00000470191 ITGAEP38570 1179 aa14.09□□□□□ -0.15
CCDC171-204ENST00000470191 DCCP43146 1447 aa14.08□□□□□ -0.15
CCDC171-204ENST00000470191 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
CCDC171-204ENST00000470191 NGLY1Q96IV0 654 aa14.08□□□□□ -0.16
CCDC171-204ENST00000470191 NUP155O75694 1391 aa14.08□□□□□ -0.16
CCDC171-204ENST00000470191 PNPLA6Q8IY17 1366 aa14.08□□□□□ -0.16
CCDC171-204ENST00000470191 METP08581 1390 aa14.07□□□□□ -0.16
CCDC171-204ENST00000470191 SETBP1Q9Y6X0 1596 aa14.06□□□□□ -0.16
CCDC171-204ENST00000470191 ADGRL3Q9HAR2 1447 aa14.04□□□□□ -0.16
CCDC171-204ENST00000470191 KIF1BO60333 1816 aa14.03□□□□□ -0.16
CCDC171-204ENST00000470191 USP21Q9UK80 565 aa14.02□□□□□ -0.17
CCDC171-204ENST00000470191 CLTCL1P53675 1640 aa14.01□□□□□ -0.17
CCDC171-204ENST00000470191 ATAD2Q6PL18 1390 aa14.01□□□□□ -0.17
CCDC171-204ENST00000470191 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
CCDC171-204ENST00000470191 C1orf167Q5SNV9 1468 aa14□□□□□ -0.17
CCDC171-204ENST00000470191 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
CCDC171-204ENST00000470191 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
CCDC171-204ENST00000470191 ROCK1Q13464 1354 aa13.99□□□□□ -0.17
CCDC171-204ENST00000470191 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
CCDC171-204ENST00000470191 PPARGC1BQ86YN6 1023 aaKnown RBP13.98□□□□□ -0.17
CCDC171-204ENST00000470191 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
CCDC171-204ENST00000470191 LAMC1P11047 1609 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms