RNA–Protein interactions for RNA: ENST00000470060.3

RN7SL228P-201, Transcript of RNA, 7SL, cytoplasmic 228, pseudogene, humanhuman

BASIC

Gene RN7SL228P, Length 303 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL228P-201ENST00000470060 PLEKHG1Q9ULL1 1385 aa11.71□□□□□ -0.53
RN7SL228P-201ENST00000470060 TMEM131LA2VDJ0 1609 aa11.71□□□□□ -0.54
RN7SL228P-201ENST00000470060 IQGAP3Q86VI3 1631 aa11.71□□□□□ -0.54
RN7SL228P-201ENST00000470060 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
RN7SL228P-201ENST00000470060 PHF23Q9BUL5 403 aaPredicted RBP11.69□□□□□ -0.54
RN7SL228P-201ENST00000470060 E9PCH4 1651 aa11.68□□□□□ -0.54
RN7SL228P-201ENST00000470060 SLC26A8Q96RN1 970 aa11.68□□□□□ -0.54
RN7SL228P-201ENST00000470060 DIP2AQ14689 1571 aa11.67□□□□□ -0.54
RN7SL228P-201ENST00000470060 HDGFP51858 240 aaKnown RBP11.67□□□□□ -0.54
RN7SL228P-201ENST00000470060 ROBO1Q9Y6N7 1651 aa11.66□□□□□ -0.54
RN7SL228P-201ENST00000470060 PROSER2Q86WR7 435 aaPredicted RBP11.66□□□□□ -0.54
RN7SL228P-201ENST00000470060 MSH6P52701 1360 aa11.66□□□□□ -0.54
RN7SL228P-201ENST00000470060 PPP1R15AO75807 674 aaPredicted RBP11.65□□□□□ -0.54
RN7SL228P-201ENST00000470060 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.65□□□□□ -0.54
RN7SL228P-201ENST00000470060 SENP3Q9H4L4 574 aaPredicted RBP11.65□□□□□ -0.54
RN7SL228P-201ENST00000470060 NCOA3Q9Y6Q9 1424 aa11.65□□□□□ -0.54
RN7SL228P-201ENST00000470060 ADAMTS13Q76LX8 1427 aa11.64□□□□□ -0.55
RN7SL228P-201ENST00000470060 BCANQ96GW7 911 aa11.64□□□□□ -0.55
RN7SL228P-201ENST00000470060 MYO5BQ9ULV0 1848 aa11.64□□□□□ -0.55
RN7SL228P-201ENST00000470060 NUP155O75694 1391 aa11.64□□□□□ -0.55
RN7SL228P-201ENST00000470060 CHD2O14647 1828 aaKnown RBP11.63□□□□□ -0.55
RN7SL228P-201ENST00000470060 TBX22Q9Y458 520 aa11.63□□□□□ -0.55
RN7SL228P-201ENST00000470060 PIK3R4Q99570 1358 aa11.63□□□□□ -0.55
RN7SL228P-201ENST00000470060 TRPM2O94759 1503 aa11.62□□□□□ -0.55
RN7SL228P-201ENST00000470060 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
RN7SL228P-201ENST00000470060 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
RN7SL228P-201ENST00000470060 SETBP1Q9Y6X0 1596 aa11.59□□□□□ -0.55
RN7SL228P-201ENST00000470060 SLAIN2Q9P270 581 aa11.59□□□□□ -0.55
RN7SL228P-201ENST00000470060 RGS17Q9UGC6 210 aaPredicted RBP11.59□□□□□ -0.55
RN7SL228P-201ENST00000470060 SPHKAPQ2M3C7 1700 aa11.59□□□□□ -0.55
RN7SL228P-201ENST00000470060 RRBP1Q9P2E9 1410 aaKnown RBP11.59□□□□□ -0.55
RN7SL228P-201ENST00000470060 PHLPP1O60346 1717 aa11.58□□□□□ -0.56
RN7SL228P-201ENST00000470060 COL16A1Q07092 1604 aaPredicted RBP11.58□□□□□ -0.56
RN7SL228P-201ENST00000470060 ITGAEP38570 1179 aa11.58□□□□□ -0.56
RN7SL228P-201ENST00000470060 NRXN3Q9Y4C0 1643 aa11.57□□□□□ -0.56
RN7SL228P-201ENST00000470060 JCADQ9P266 1359 aa11.57□□□□□ -0.56
RN7SL228P-201ENST00000470060 NUTM2DQ5VT03 806 aaPredicted RBP11.57□□□□□ -0.56
RN7SL228P-201ENST00000470060 DCCP43146 1447 aa11.57□□□□□ -0.56
RN7SL228P-201ENST00000470060 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
RN7SL228P-201ENST00000470060 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
RN7SL228P-201ENST00000470060 PTPRUQ92729 1446 aa11.56□□□□□ -0.56
RN7SL228P-201ENST00000470060 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.55□□□□□ -0.56
RN7SL228P-201ENST00000470060 CADPS2Q86UW7 1296 aa11.55□□□□□ -0.56
RN7SL228P-201ENST00000470060 C19orf44Q9H6X5 657 aa11.55□□□□□ -0.56
RN7SL228P-201ENST00000470060 NAIPQ13075 1403 aa11.54□□□□□ -0.56
RN7SL228P-201ENST00000470060 CLTCL1P53675 1640 aa11.54□□□□□ -0.56
RN7SL228P-201ENST00000470060 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
RN7SL228P-201ENST00000470060 NEXMIFQ5QGS0 1516 aa11.54□□□□□ -0.56
RN7SL228P-201ENST00000470060 ATF3P18847 181 aa11.53□□□□□ -0.56
RN7SL228P-201ENST00000470060 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
RN7SL228P-201ENST00000470060 AMOTL2Q9Y2J4 779 aa11.53□□□□□ -0.56
RN7SL228P-201ENST00000470060 SPATA31A6Q5VVP1 1343 aa11.52□□□□□ -0.57
RN7SL228P-201ENST00000470060 SHPRHQ149N8 1683 aa11.52□□□□□ -0.57
RN7SL228P-201ENST00000470060 HFM1A2PYH4 1435 aa11.52□□□□□ -0.57
RN7SL228P-201ENST00000470060 LRP6O75581 1613 aa11.51□□□□□ -0.57
RN7SL228P-201ENST00000470060 POTEAQ6S8J7 498 aa11.51□□□□□ -0.57
RN7SL228P-201ENST00000470060 ASXL1Q8IXJ9 1541 aa11.5□□□□□ -0.57
RN7SL228P-201ENST00000470060 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
RN7SL228P-201ENST00000470060 METP08581 1390 aa11.5□□□□□ -0.57
RN7SL228P-201ENST00000470060 MST1RQ04912 1400 aa11.5□□□□□ -0.57
RN7SL228P-201ENST00000470060 ADGRL3Q9HAR2 1447 aa11.5□□□□□ -0.57
RN7SL228P-201ENST00000470060 BRINP3Q76B58 766 aa11.49□□□□□ -0.57
RN7SL228P-201ENST00000470060 PTCH1Q13635 1447 aa11.48□□□□□ -0.57
RN7SL228P-201ENST00000470060 PRAG1Q86YV5 1406 aa11.48□□□□□ -0.57
RN7SL228P-201ENST00000470060 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
RN7SL228P-201ENST00000470060 SETD5Q9C0A6 1442 aa11.47□□□□□ -0.57
RN7SL228P-201ENST00000470060 KIF1BO60333 1816 aa11.46□□□□□ -0.57
RN7SL228P-201ENST00000470060 NALCNQ8IZF0 1738 aa11.46□□□□□ -0.57
RN7SL228P-201ENST00000470060 SETD1AO15047 1707 aaKnown RBP11.46□□□□□ -0.58
RN7SL228P-201ENST00000470060 RPGRIP1LQ68CZ1 1315 aa11.44□□□□□ -0.58
RN7SL228P-201ENST00000470060 VGFO15240 615 aaPredicted RBP11.44□□□□□ -0.58
RN7SL228P-201ENST00000470060 MEX3CQ5U5Q3 659 aaKnown RBP11.44□□□□□ -0.58
RN7SL228P-201ENST00000470060 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
RN7SL228P-201ENST00000470060 LAMC1P11047 1609 aa11.42□□□□□ -0.58
RN7SL228P-201ENST00000470060 TRIM52Q96A61 297 aa11.42□□□□□ -0.58
RN7SL228P-201ENST00000470060 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
RN7SL228P-201ENST00000470060 C1orf167Q5SNV9 1468 aa11.42□□□□□ -0.58
RN7SL228P-201ENST00000470060 ROBO2Q9HCK4 1378 aa11.41□□□□□ -0.58
RN7SL228P-201ENST00000470060 PPLO60437 1756 aa11.41□□□□□ -0.58
RN7SL228P-201ENST00000470060 CDK12Q9NYV4 1490 aaPredicted RBP11.41□□□□□ -0.58
RN7SL228P-201ENST00000470060 LRRC59Q96AG4 307 aaKnown RBP11.41□□□□□ -0.58
RN7SL228P-201ENST00000470060 PNPLA6Q8IY17 1366 aa11.41□□□□□ -0.58
RN7SL228P-201ENST00000470060 CCDC144AA2RUR9 1427 aa11.39□□□□□ -0.59
RN7SL228P-201ENST00000470060 CDC42BPGQ6DT37 1551 aa11.39□□□□□ -0.59
RN7SL228P-201ENST00000470060 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
RN7SL228P-201ENST00000470060 TECPR2O15040 1411 aa11.37□□□□□ -0.59
RN7SL228P-201ENST00000470060 NUTM2BA6NNL0 878 aaPredicted RBP11.37□□□□□ -0.59
RN7SL228P-201ENST00000470060 NUTM2EB1AL46 878 aaPredicted RBP11.37□□□□□ -0.59
RN7SL228P-201ENST00000470060 NUTM2AQ8IVF1 878 aaPredicted RBP11.37□□□□□ -0.59
RN7SL228P-201ENST00000470060 AFF2P51816 1311 aa11.36□□□□□ -0.59
RN7SL228P-201ENST00000470060 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
RN7SL228P-201ENST00000470060 DDX17Q92841 729 aaKnown RBP11.36□□□□□ -0.59
RN7SL228P-201ENST00000470060 ANKRD30BQ9BXX2 1392 aa11.36□□□□□ -0.59
RN7SL228P-201ENST00000470060 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
RN7SL228P-201ENST00000470060 RXRBP28702 533 aa11.35□□□□□ -0.59
RN7SL228P-201ENST00000470060 COL22A1Q8NFW1 1626 aaPredicted RBP11.35□□□□□ -0.59
RN7SL228P-201ENST00000470060 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
RN7SL228P-201ENST00000470060 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
RN7SL228P-201ENST00000470060 FOXD1Q16676 465 aa11.34□□□□□ -0.59
RN7SL228P-201ENST00000470060 KNDC1Q76NI1 1749 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms