RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 ZFYVE9O95405 1425 aa25.77■■□□□ 1.72
C4A-250ENST00000469975 MED1Q15648 1581 aaPredicted RBP25.77■■□□□ 1.72
C4A-250ENST00000469975 RBM33Q96EV2 1170 aaKnown RBP25.76■■□□□ 1.71
C4A-250ENST00000469975 BCANQ96GW7 911 aa25.76■■□□□ 1.71
C4A-250ENST00000469975 NUP155O75694 1391 aa25.76■■□□□ 1.71
C4A-250ENST00000469975 RIMS2Q9UQ26 1411 aa25.75■■□□□ 1.71
C4A-250ENST00000469975 CHGAP10645 457 aaKnown RBP25.75■■□□□ 1.71
C4A-250ENST00000469975 KCNA6P17658 529 aa25.73■■□□□ 1.71
C4A-250ENST00000469975 TMEM94Q12767 1356 aa25.72■■□□□ 1.71
C4A-250ENST00000469975 NWD1Q149M9 1564 aa25.72■■□□□ 1.71
C4A-250ENST00000469975 NUTM2DQ5VT03 806 aaPredicted RBP25.71■■□□□ 1.71
C4A-250ENST00000469975 PPP1R15AO75807 674 aaPredicted RBP25.69■■□□□ 1.7
C4A-250ENST00000469975 PROSER2Q86WR7 435 aaPredicted RBP25.69■■□□□ 1.7
C4A-250ENST00000469975 CHD2O14647 1828 aaKnown RBP25.69■■□□□ 1.7
C4A-250ENST00000469975 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
C4A-250ENST00000469975 SOCS7O14512 581 aa25.68■■□□□ 1.7
C4A-250ENST00000469975 RRBP1Q9P2E9 1410 aaKnown RBP25.67■■□□□ 1.7
C4A-250ENST00000469975 SPHKAPQ2M3C7 1700 aa25.66■■□□□ 1.7
C4A-250ENST00000469975 NKTRP30414 1462 aaKnown RBP25.65■■□□□ 1.7
C4A-250ENST00000469975 ROBO1Q9Y6N7 1651 aa25.61■■□□□ 1.69
C4A-250ENST00000469975 HDGFP51858 240 aaKnown RBP25.6■■□□□ 1.69
C4A-250ENST00000469975 ADAMTS13Q76LX8 1427 aa25.6■■□□□ 1.69
C4A-250ENST00000469975 NAIPQ13075 1403 aa25.58■■□□□ 1.69
C4A-250ENST00000469975 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.58■■□□□ 1.69
C4A-250ENST00000469975 FAM135BQ49AJ0 1406 aa25.56■■□□□ 1.68
C4A-250ENST00000469975 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
C4A-250ENST00000469975 CLTCL1P53675 1640 aa25.55■■□□□ 1.68
C4A-250ENST00000469975 DIP2AQ14689 1571 aa25.54■■□□□ 1.68
C4A-250ENST00000469975 MSH6P52701 1360 aa25.54■■□□□ 1.68
C4A-250ENST00000469975 NRXN3Q9Y4C0 1643 aa25.52■■□□□ 1.68
C4A-250ENST00000469975 PHF23Q9BUL5 403 aaPredicted RBP25.52■■□□□ 1.68
C4A-250ENST00000469975 TRPM2O94759 1503 aa25.49■■□□□ 1.67
C4A-250ENST00000469975 PTPRUQ92729 1446 aa25.49■■□□□ 1.67
C4A-250ENST00000469975 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
C4A-250ENST00000469975 KIF1BO60333 1816 aa25.48■■□□□ 1.67
C4A-250ENST00000469975 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.47■■□□□ 1.67
C4A-250ENST00000469975 PHLPP1O60346 1717 aa25.46■■□□□ 1.67
C4A-250ENST00000469975 TRIM52Q96A61 297 aa25.46■■□□□ 1.67
C4A-250ENST00000469975 SLAIN2Q9P270 581 aa25.46■■□□□ 1.67
C4A-250ENST00000469975 HFM1A2PYH4 1435 aa25.46■■□□□ 1.67
C4A-250ENST00000469975 C14orf37Q86TY3 774 aa25.45■■□□□ 1.66
C4A-250ENST00000469975 PIK3R4Q99570 1358 aa25.44■■□□□ 1.66
C4A-250ENST00000469975 SETBP1Q9Y6X0 1596 aa25.44■■□□□ 1.66
C4A-250ENST00000469975 NEXMIFQ5QGS0 1516 aa25.44■■□□□ 1.66
C4A-250ENST00000469975 AMOTL2Q9Y2J4 779 aa25.43■■□□□ 1.66
C4A-250ENST00000469975 XRN1Q8IZH2 1706 aaKnown RBP25.43■■□□□ 1.66
C4A-250ENST00000469975 NCOA3Q9Y6Q9 1424 aa25.39■■□□□ 1.66
C4A-250ENST00000469975 RGS17Q9UGC6 210 aaPredicted RBP25.39■■□□□ 1.66
C4A-250ENST00000469975 METP08581 1390 aa25.39■■□□□ 1.65
C4A-250ENST00000469975 COL16A1Q07092 1604 aaPredicted RBP25.36■■□□□ 1.65
C4A-250ENST00000469975 SLC4A1APQ9BWU0 796 aaKnown RBP25.35■■□□□ 1.65
C4A-250ENST00000469975 C19orf44Q9H6X5 657 aa25.35■■□□□ 1.65
C4A-250ENST00000469975 FOXD1Q16676 465 aa25.34■■□□□ 1.65
C4A-250ENST00000469975 ATF3P18847 181 aa25.33■■□□□ 1.65
C4A-250ENST00000469975 CADPS2Q86UW7 1296 aa25.32■■□□□ 1.64
C4A-250ENST00000469975 SETD1AO15047 1707 aaKnown RBP25.32■■□□□ 1.64
C4A-250ENST00000469975 PPLO60437 1756 aa25.31■■□□□ 1.64
C4A-250ENST00000469975 NALCNQ8IZF0 1738 aa25.29■■□□□ 1.64
C4A-250ENST00000469975 AHDC1Q5TGY3 1603 aaPredicted RBP25.28■■□□□ 1.64
C4A-250ENST00000469975 JCADQ9P266 1359 aa25.27■■□□□ 1.64
C4A-250ENST00000469975 POTEAQ6S8J7 498 aa25.25■■□□□ 1.63
C4A-250ENST00000469975 BRINP3Q76B58 766 aa25.24■■□□□ 1.63
C4A-250ENST00000469975 DCCP43146 1447 aa25.23■■□□□ 1.63
C4A-250ENST00000469975 MST1RQ04912 1400 aa25.23■■□□□ 1.63
C4A-250ENST00000469975 LRP6O75581 1613 aa25.22■■□□□ 1.63
C4A-250ENST00000469975 ASXL1Q8IXJ9 1541 aa25.22■■□□□ 1.63
C4A-250ENST00000469975 ADGRL3Q9HAR2 1447 aa25.21■■□□□ 1.63
C4A-250ENST00000469975 SHPRHQ149N8 1683 aa25.21■■□□□ 1.63
C4A-250ENST00000469975 VGFO15240 615 aaPredicted RBP25.21■■□□□ 1.63
C4A-250ENST00000469975 NHSL1Q5SYE7 1610 aa25.19■■□□□ 1.62
C4A-250ENST00000469975 RPGRIP1LQ68CZ1 1315 aa25.18■■□□□ 1.62
C4A-250ENST00000469975 MPHOSPH9Q99550 1183 aa25.18■■□□□ 1.62
C4A-250ENST00000469975 ROBO2Q9HCK4 1378 aa25.18■■□□□ 1.62
C4A-250ENST00000469975 IFT172Q9UG01 1749 aa25.17■■□□□ 1.62
C4A-250ENST00000469975 DDX17Q92841 729 aaKnown RBP25.16■■□□□ 1.62
C4A-250ENST00000469975 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
C4A-250ENST00000469975 PTCH1Q13635 1447 aa25.14■■□□□ 1.62
C4A-250ENST00000469975 RGL3Q3MIN7 710 aa25.14■■□□□ 1.62
C4A-250ENST00000469975 ADGRF5Q8IZF2 1346 aa25.13■■□□□ 1.61
C4A-250ENST00000469975 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
C4A-250ENST00000469975 SPATA31E1Q6ZUB1 1445 aa25.12■■□□□ 1.61
C4A-250ENST00000469975 NUTM2BA6NNL0 878 aaPredicted RBP25.1■■□□□ 1.61
C4A-250ENST00000469975 NUTM2EB1AL46 878 aaPredicted RBP25.1■■□□□ 1.61
C4A-250ENST00000469975 MEX3CQ5U5Q3 659 aaKnown RBP25.1■■□□□ 1.61
C4A-250ENST00000469975 NUTM2AQ8IVF1 878 aaPredicted RBP25.1■■□□□ 1.61
C4A-250ENST00000469975 C1orf167Q5SNV9 1468 aa25.09■■□□□ 1.61
C4A-250ENST00000469975 SETD5Q9C0A6 1442 aa25.08■■□□□ 1.61
C4A-250ENST00000469975 PRAG1Q86YV5 1406 aa25.07■■□□□ 1.6
C4A-250ENST00000469975 ORAI2Q96SN7 254 aa25.04■■□□□ 1.6
C4A-250ENST00000469975 STK26Q9P289 416 aa25.03■■□□□ 1.6
C4A-250ENST00000469975 LAMC1P11047 1609 aa25.01■■□□□ 1.59
C4A-250ENST00000469975 TMEM132EQ6IEE7 984 aa25.01■■□□□ 1.59
C4A-250ENST00000469975 ANKRD30BQ9BXX2 1392 aa25.01■■□□□ 1.59
C4A-250ENST00000469975 RAB3GAP2Q9H2M9 1393 aa25.01■■□□□ 1.59
C4A-250ENST00000469975 LRRC59Q96AG4 307 aaKnown RBP25■■□□□ 1.59
C4A-250ENST00000469975 PNPLA6Q8IY17 1366 aa25■■□□□ 1.59
C4A-250ENST00000469975 PIK3C2GO75747 1445 aa24.99■■□□□ 1.59
C4A-250ENST00000469975 KNDC1Q76NI1 1749 aa24.99■■□□□ 1.59
C4A-250ENST00000469975 WAPLQ7Z5K2 1190 aa24.99■■□□□ 1.59
C4A-250ENST00000469975 CDC42BPGQ6DT37 1551 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms