RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 TMEM2Q9UHN6 1383 aa29.99■■■□□ 2.39
BRAF-202ENST00000469930 IFT172Q9UG01 1749 aa29.98■■■□□ 2.39
BRAF-202ENST00000469930 NEXMIFQ5QGS0 1516 aa29.97■■■□□ 2.39
BRAF-202ENST00000469930 HDGFP51858 240 aaKnown RBP29.97■■■□□ 2.39
BRAF-202ENST00000469930 ZNF326Q5BKZ1 582 aaKnown RBP29.96■■■□□ 2.39
BRAF-202ENST00000469930 PPLO60437 1756 aa29.95■■■□□ 2.39
BRAF-202ENST00000469930 MYOM2P54296 1465 aa29.95■■■□□ 2.39
BRAF-202ENST00000469930 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.95■■■□□ 2.39
BRAF-202ENST00000469930 VGFO15240 615 aaPredicted RBP29.93■■■□□ 2.38
BRAF-202ENST00000469930 PPP1R15AO75807 674 aaPredicted RBP29.93■■■□□ 2.38
BRAF-202ENST00000469930 RIMS2Q9UQ26 1411 aa29.93■■■□□ 2.38
BRAF-202ENST00000469930 DCAF11Q8TEB1 546 aa29.92■■■□□ 2.38
BRAF-202ENST00000469930 LMTK3Q96Q04 1460 aa29.91■■■□□ 2.38
BRAF-202ENST00000469930 NRXN1Q9ULB1 1477 aa29.91■■■□□ 2.38
BRAF-202ENST00000469930 EID1Q9Y6B2 187 aa29.85■■■□□ 2.37
BRAF-202ENST00000469930 PRAG1Q86YV5 1406 aa29.83■■■□□ 2.37
BRAF-202ENST00000469930 TXNDC2Q86VQ3 553 aa29.82■■■□□ 2.36
BRAF-202ENST00000469930 ANKLE2Q86XL3 938 aa29.82■■■□□ 2.36
BRAF-202ENST00000469930 KDM2AQ9Y2K7 1162 aa29.82■■■□□ 2.36
BRAF-202ENST00000469930 SCAF11Q99590 1463 aaKnown RBP29.81■■■□□ 2.36
BRAF-202ENST00000469930 ADGRF5Q8IZF2 1346 aa29.81■■■□□ 2.36
BRAF-202ENST00000469930 LTKP29376 864 aa29.81■■■□□ 2.36
BRAF-202ENST00000469930 PIK3C2GO75747 1445 aa29.8■■■□□ 2.36
BRAF-202ENST00000469930 PLEKHG1Q9ULL1 1385 aa29.79■■■□□ 2.36
BRAF-202ENST00000469930 MED14O60244 1454 aa29.77■■■□□ 2.36
BRAF-202ENST00000469930 NBPF8Q3BBV2 869 aa29.76■■■□□ 2.35
BRAF-202ENST00000469930 SETBP1Q9Y6X0 1596 aa29.76■■■□□ 2.35
BRAF-202ENST00000469930 KIAA1210Q9ULL0 1709 aa29.76■■■□□ 2.35
BRAF-202ENST00000469930 C14orf93Q9H972 538 aaKnown RBP29.74■■■□□ 2.35
BRAF-202ENST00000469930 NUTM2DQ5VT03 806 aaPredicted RBP29.72■■■□□ 2.35
BRAF-202ENST00000469930 POLR1AO95602 1720 aaPredicted RBP29.71■■■□□ 2.35
BRAF-202ENST00000469930 LAMC1P11047 1609 aa29.71■■■□□ 2.35
BRAF-202ENST00000469930 RALGAPBQ86X10 1494 aa29.69■■■□□ 2.34
BRAF-202ENST00000469930 TRPM1Q7Z4N2 1603 aa29.69■■■□□ 2.34
BRAF-202ENST00000469930 NRXN3Q9Y4C0 1643 aa29.69■■■□□ 2.34
BRAF-202ENST00000469930 HSPA2P54652 639 aa29.68■■■□□ 2.34
BRAF-202ENST00000469930 GPRASP1Q5JY77 1395 aa29.66■■■□□ 2.34
BRAF-202ENST00000469930 DIP2AQ14689 1571 aa29.66■■■□□ 2.34
BRAF-202ENST00000469930 NPHP4O75161 1426 aaPredicted RBP29.66■■■□□ 2.34
BRAF-202ENST00000469930 ADAMTS13Q76LX8 1427 aa29.66■■■□□ 2.34
BRAF-202ENST00000469930 ALKQ9UM73 1620 aa29.66■■■□□ 2.34
BRAF-202ENST00000469930 TBX22Q9Y458 520 aa29.65■■■□□ 2.34
BRAF-202ENST00000469930 ILDR1Q86SU0 546 aaPredicted RBP29.64■■■□□ 2.34
BRAF-202ENST00000469930 NCKAP5LQ9HCH0 1330 aa29.64■■■□□ 2.34
BRAF-202ENST00000469930 CFAP70Q5T0N1 1121 aa29.63■■■□□ 2.33
BRAF-202ENST00000469930 SETD1AO15047 1707 aaKnown RBP29.62■■■□□ 2.33
BRAF-202ENST00000469930 STRCQ7RTU9 1775 aa29.62■■■□□ 2.33
BRAF-202ENST00000469930 IQGAP1P46940 1657 aa29.62■■■□□ 2.33
BRAF-202ENST00000469930 PIK3R4Q99570 1358 aa29.59■■■□□ 2.33
BRAF-202ENST00000469930 ADGRB1O14514 1584 aa29.59■■■□□ 2.33
BRAF-202ENST00000469930 ROCK2O75116 1388 aaKnown RBP29.57■■■□□ 2.32
BRAF-202ENST00000469930 NBPF1Q3BBV0 1214 aa29.57■■■□□ 2.32
BRAF-202ENST00000469930 BCANQ96GW7 911 aa29.55■■■□□ 2.32
BRAF-202ENST00000469930 DMRT2Q9Y5R5 561 aa29.54■■■□□ 2.32
BRAF-202ENST00000469930 ASXL1Q8IXJ9 1541 aa29.54■■■□□ 2.32
BRAF-202ENST00000469930 SLC26A8Q96RN1 970 aa29.51■■■□□ 2.31
BRAF-202ENST00000469930 METP08581 1390 aa29.51■■■□□ 2.31
BRAF-202ENST00000469930 CARD11Q9BXL7 1154 aa29.5■■■□□ 2.31
BRAF-202ENST00000469930 LRPPRCP42704 1394 aaKnown RBP29.49■■■□□ 2.31
BRAF-202ENST00000469930 ABCC11Q96J66 1382 aa29.49■■■□□ 2.31
BRAF-202ENST00000469930 YTHDC2Q9H6S0 1430 aaKnown RBP29.47■■■□□ 2.31
BRAF-202ENST00000469930 TMEM132EQ6IEE7 984 aa29.47■■■□□ 2.31
BRAF-202ENST00000469930 SIRT1Q96EB6 747 aa29.47■■■□□ 2.31
BRAF-202ENST00000469930 TECPR2O15040 1411 aa29.46■■■□□ 2.31
BRAF-202ENST00000469930 DLC1Q96QB1 1528 aa29.44■■■□□ 2.3
BRAF-202ENST00000469930 CHD2O14647 1828 aaKnown RBP29.43■■■□□ 2.3
BRAF-202ENST00000469930 KNDC1Q76NI1 1749 aa29.42■■■□□ 2.3
BRAF-202ENST00000469930 SENP3Q9H4L4 574 aaPredicted RBP29.42■■■□□ 2.3
BRAF-202ENST00000469930 PTPRUQ92729 1446 aa29.42■■■□□ 2.3
BRAF-202ENST00000469930 KCNA6P17658 529 aa29.4■■■□□ 2.3
BRAF-202ENST00000469930 XRN1Q8IZH2 1706 aaKnown RBP29.4■■■□□ 2.3
BRAF-202ENST00000469930 NWD1Q149M9 1564 aa29.39■■■□□ 2.3
BRAF-202ENST00000469930 USP47Q96K76 1375 aa29.39■■■□□ 2.29
BRAF-202ENST00000469930 FAM135BQ49AJ0 1406 aa29.38■■■□□ 2.29
BRAF-202ENST00000469930 EIF4G2P78344 907 aaKnown RBP eCLIP29.38■■■□□ 2.29
BRAF-202ENST00000469930 AMOTL2Q9Y2J4 779 aa29.38■■■□□ 2.29
BRAF-202ENST00000469930 EIF3AQ14152 1382 aaKnown RBP29.38■■■□□ 2.29
BRAF-202ENST00000469930 CPS1P31327 1500 aa29.37■■■□□ 2.29
BRAF-202ENST00000469930 PTCH1Q13635 1447 aa29.36■■■□□ 2.29
BRAF-202ENST00000469930 TRAK1Q9UPV9 953 aa29.34■■■□□ 2.29
BRAF-202ENST00000469930 ARHGEF28Q8N1W1 1705 aaKnown RBP29.34■■■□□ 2.29
BRAF-202ENST00000469930 STK26Q9P289 416 aa29.32■■■□□ 2.28
BRAF-202ENST00000469930 NKTRP30414 1462 aaKnown RBP29.31■■■□□ 2.28
BRAF-202ENST00000469930 SLC24A1O60721 1099 aa29.31■■■□□ 2.28
BRAF-202ENST00000469930 SBNO2Q9Y2G9 1366 aa29.3■■■□□ 2.28
BRAF-202ENST00000469930 HSPA5P11021 654 aaKnown RBP29.29■■■□□ 2.28
BRAF-202ENST00000469930 ROBO2Q9HCK4 1378 aa29.28■■■□□ 2.28
BRAF-202ENST00000469930 CENPJQ9HC77 1338 aaPredicted RBP29.27■■■□□ 2.28
BRAF-202ENST00000469930 ST20-MTHFSA0A0A6YYL1 179 aa29.27■■■□□ 2.28
BRAF-202ENST00000469930 PRAM1Q96QH2 718 aa29.24■■■□□ 2.27
BRAF-202ENST00000469930 NCOA3Q9Y6Q9 1424 aa29.24■■■□□ 2.27
BRAF-202ENST00000469930 STRCP1A6NGW2 1772 aa29.24■■■□□ 2.27
BRAF-202ENST00000469930 TESK2Q96S53 571 aa29.23■■■□□ 2.27
BRAF-202ENST00000469930 POGKQ9P215 609 aa29.22■■■□□ 2.27
BRAF-202ENST00000469930 PLEKHH1Q9ULM0 1364 aa29.19■■■□□ 2.26
BRAF-202ENST00000469930 WAPLQ7Z5K2 1190 aa29.19■■■□□ 2.26
BRAF-202ENST00000469930 ZNF335Q9H4Z2 1342 aaPredicted RBP29.19■■■□□ 2.26
BRAF-202ENST00000469930 QRICH2Q9H0J4 1663 aa29.18■■■□□ 2.26
BRAF-202ENST00000469930 PROSER2Q86WR7 435 aaPredicted RBP29.15■■■□□ 2.26
BRAF-202ENST00000469930 ADGRB2O60241 1585 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms