RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 CCDC144AA2RUR9 1427 aa37.51■■■■□ 3.59
KPNA4-202ENST00000469804 NUTM2DQ5VT03 806 aaPredicted RBP37.46■■■■□ 3.59
KPNA4-202ENST00000469804 ZNF326Q5BKZ1 582 aaKnown RBP37.44■■■■□ 3.58
KPNA4-202ENST00000469804 SENP3Q9H4L4 574 aaPredicted RBP37.44■■■■□ 3.58
KPNA4-202ENST00000469804 NEXMIFQ5QGS0 1516 aa37.44■■■■□ 3.58
KPNA4-202ENST00000469804 ANKRD30BQ9BXX2 1392 aa37.41■■■■□ 3.58
KPNA4-202ENST00000469804 ZNF335Q9H4Z2 1342 aaPredicted RBP37.39■■■■□ 3.58
KPNA4-202ENST00000469804 PPP1R15AO75807 674 aaPredicted RBP37.39■■■■□ 3.58
KPNA4-202ENST00000469804 PPLO60437 1756 aa37.39■■■■□ 3.58
KPNA4-202ENST00000469804 LTBP4Q8N2S1 1624 aa37.38■■■■□ 3.57
KPNA4-202ENST00000469804 SPATA31E1Q6ZUB1 1445 aa37.36■■■■□ 3.57
KPNA4-202ENST00000469804 PLEKHG1Q9ULL1 1385 aa37.35■■■■□ 3.57
KPNA4-202ENST00000469804 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.35■■■■□ 3.57
KPNA4-202ENST00000469804 STRCP1A6NGW2 1772 aa37.34■■■■□ 3.57
KPNA4-202ENST00000469804 IFT172Q9UG01 1749 aa37.34■■■■□ 3.57
KPNA4-202ENST00000469804 HDGFP51858 240 aaKnown RBP37.34■■■■□ 3.57
KPNA4-202ENST00000469804 BCANQ96GW7 911 aa37.31■■■■□ 3.56
KPNA4-202ENST00000469804 NRXN3Q9Y4C0 1643 aa37.3■■■■□ 3.56
KPNA4-202ENST00000469804 SLC26A8Q96RN1 970 aa37.3■■■■□ 3.56
KPNA4-202ENST00000469804 PCGF6Q9BYE7 350 aa37.29■■■■□ 3.56
KPNA4-202ENST00000469804 RGL3Q3MIN7 710 aa37.28■■■■□ 3.56
KPNA4-202ENST00000469804 DHX57Q6P158 1386 aaKnown RBP37.25■■■■□ 3.55
KPNA4-202ENST00000469804 ADAMTS13Q76LX8 1427 aa37.24■■■■□ 3.55
KPNA4-202ENST00000469804 SETBP1Q9Y6X0 1596 aa37.23■■■■□ 3.55
KPNA4-202ENST00000469804 DIP2AQ14689 1571 aa37.21■■■■□ 3.55
KPNA4-202ENST00000469804 RPGRIP1LQ68CZ1 1315 aa37.2■■■■□ 3.55
KPNA4-202ENST00000469804 CERKQ8TCT0 537 aa37.17■■■■□ 3.54
KPNA4-202ENST00000469804 CHD2O14647 1828 aaKnown RBP37.17■■■■□ 3.54
KPNA4-202ENST00000469804 CPS1P31327 1500 aa37.16■■■■□ 3.54
KPNA4-202ENST00000469804 SETD1AO15047 1707 aaKnown RBP37.14■■■■□ 3.54
KPNA4-202ENST00000469804 NWD1Q149M9 1564 aa37.13■■■■□ 3.53
KPNA4-202ENST00000469804 VGFO15240 615 aaPredicted RBP37.12■■■■□ 3.53
KPNA4-202ENST00000469804 TBX22Q9Y458 520 aa37.1■■■■□ 3.53
KPNA4-202ENST00000469804 ADGRF5Q8IZF2 1346 aa37.1■■■■□ 3.53
KPNA4-202ENST00000469804 XIRP1Q702N8 1843 aaKnown RBP37.07■■■■□ 3.52
KPNA4-202ENST00000469804 ALKQ9UM73 1620 aa37.07■■■■□ 3.52
KPNA4-202ENST00000469804 LRRC7Q96NW7 1537 aa37.05■■■■□ 3.52
KPNA4-202ENST00000469804 MYOM2P54296 1465 aa37.04■■■■□ 3.52
KPNA4-202ENST00000469804 KCNA6P17658 529 aa37.03■■■■□ 3.52
KPNA4-202ENST00000469804 SIN3AQ96ST3 1273 aa37.03■■■■□ 3.52
KPNA4-202ENST00000469804 PTPRUQ92729 1446 aa37.02■■■■□ 3.52
KPNA4-202ENST00000469804 METP08581 1390 aa37.02■■■■□ 3.52
KPNA4-202ENST00000469804 IQSEC2Q5JU85 1478 aa37.01■■■■□ 3.51
KPNA4-202ENST00000469804 XRN1Q8IZH2 1706 aaKnown RBP37■■■■□ 3.51
KPNA4-202ENST00000469804 PIK3C2GO75747 1445 aa37■■■■□ 3.51
KPNA4-202ENST00000469804 NKTRP30414 1462 aaKnown RBP36.99■■■■□ 3.51
KPNA4-202ENST00000469804 NRXN1Q9ULB1 1477 aa36.99■■■■□ 3.51
KPNA4-202ENST00000469804 PIK3R4Q99570 1358 aa36.98■■■■□ 3.51
KPNA4-202ENST00000469804 DCAF11Q8TEB1 546 aa36.94■■■■□ 3.5
KPNA4-202ENST00000469804 KDM2AQ9Y2K7 1162 aa36.94■■■■□ 3.5
KPNA4-202ENST00000469804 ASXL1Q8IXJ9 1541 aa36.93■■■■□ 3.5
KPNA4-202ENST00000469804 NEUROD1Q13562 356 aa36.92■■■■□ 3.5
KPNA4-202ENST00000469804 RBM33Q96EV2 1170 aaKnown RBP36.91■■■■□ 3.5
KPNA4-202ENST00000469804 LAMC1P11047 1609 aa36.91■■■■□ 3.5
KPNA4-202ENST00000469804 AMOTL2Q9Y2J4 779 aa36.9■■■■□ 3.5
KPNA4-202ENST00000469804 TMEM94Q12767 1356 aa36.89■■■■□ 3.5
KPNA4-202ENST00000469804 PROSER2Q86WR7 435 aaPredicted RBP36.88■■■■□ 3.49
KPNA4-202ENST00000469804 CFAP70Q5T0N1 1121 aa36.82■■■■□ 3.48
KPNA4-202ENST00000469804 FBXO41Q8TF61 875 aa36.82■■■■□ 3.48
KPNA4-202ENST00000469804 TMEM132EQ6IEE7 984 aa36.79■■■■□ 3.48
KPNA4-202ENST00000469804 C14orf93Q9H972 538 aaKnown RBP36.79■■■■□ 3.48
KPNA4-202ENST00000469804 L3MBTL2Q969R5 705 aa36.78■■■■□ 3.48
KPNA4-202ENST00000469804 KNDC1Q76NI1 1749 aa36.78■■■■□ 3.48
KPNA4-202ENST00000469804 UBAP1LF5GYI3 381 aa36.76■■■■□ 3.48
KPNA4-202ENST00000469804 ILDR1Q86SU0 546 aaPredicted RBP36.74■■■■□ 3.47
KPNA4-202ENST00000469804 STAC3Q96MF2 364 aa36.74■■■■□ 3.47
KPNA4-202ENST00000469804 PTCH1Q13635 1447 aa36.73■■■■□ 3.47
KPNA4-202ENST00000469804 ADGRB1O14514 1584 aa36.73■■■■□ 3.47
KPNA4-202ENST00000469804 PRAG1Q86YV5 1406 aa36.72■■■■□ 3.47
KPNA4-202ENST00000469804 NALCNQ8IZF0 1738 aa36.72■■■■□ 3.47
KPNA4-202ENST00000469804 ROBO2Q9HCK4 1378 aa36.72■■■■□ 3.47
KPNA4-202ENST00000469804 STK26Q9P289 416 aa36.71■■■■□ 3.47
KPNA4-202ENST00000469804 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.71■■■■□ 3.47
KPNA4-202ENST00000469804 KIAA1210Q9ULL0 1709 aa36.71■■■■□ 3.47
KPNA4-202ENST00000469804 YTHDC2Q9H6S0 1430 aaKnown RBP36.7■■■■□ 3.47
KPNA4-202ENST00000469804 LRPPRCP42704 1394 aaKnown RBP36.7■■■■□ 3.47
KPNA4-202ENST00000469804 C14orf37Q86TY3 774 aa36.67■■■■□ 3.46
KPNA4-202ENST00000469804 TECPR2O15040 1411 aa36.67■■■■□ 3.46
KPNA4-202ENST00000469804 MSH6P52701 1360 aa36.66■■■■□ 3.46
KPNA4-202ENST00000469804 NCOA3Q9Y6Q9 1424 aa36.66■■■■□ 3.46
KPNA4-202ENST00000469804 TONSLQ96HA7 1378 aa36.66■■■■□ 3.46
KPNA4-202ENST00000469804 TOM1O60784 492 aa36.63■■■■□ 3.45
KPNA4-202ENST00000469804 ABCC11Q96J66 1382 aa36.62■■■■□ 3.45
KPNA4-202ENST00000469804 TRPM1Q7Z4N2 1603 aa36.61■■■■□ 3.45
KPNA4-202ENST00000469804 PIP4K2BP78356 416 aa36.6■■■■□ 3.45
KPNA4-202ENST00000469804 ADGRL3Q9HAR2 1447 aa36.59■■■■□ 3.45
KPNA4-202ENST00000469804 SCAF1Q9H7N4 1312 aaKnown RBP36.59■■■■□ 3.45
KPNA4-202ENST00000469804 CCER1Q8TC90 406 aaPredicted RBP36.58■■■■□ 3.45
KPNA4-202ENST00000469804 PLEKHH1Q9ULM0 1364 aa36.57■■■■□ 3.45
KPNA4-202ENST00000469804 WAPLQ7Z5K2 1190 aa36.56■■■■□ 3.44
KPNA4-202ENST00000469804 ARHGEF28Q8N1W1 1705 aaKnown RBP36.56■■■■□ 3.44
KPNA4-202ENST00000469804 DLC1Q96QB1 1528 aa36.54■■■■□ 3.44
KPNA4-202ENST00000469804 C19orf44Q9H6X5 657 aa36.54■■■■□ 3.44
KPNA4-202ENST00000469804 CLSPNQ9HAW4 1339 aa36.54■■■■□ 3.44
KPNA4-202ENST00000469804 NBPF1Q3BBV0 1214 aa36.53■■■■□ 3.44
KPNA4-202ENST00000469804 TRAK1Q9UPV9 953 aa36.51■■■■□ 3.44
KPNA4-202ENST00000469804 FAM135BQ49AJ0 1406 aa36.51■■■■□ 3.43
KPNA4-202ENST00000469804 NBPF8Q3BBV2 869 aa36.5■■■■□ 3.43
KPNA4-202ENST00000469804 ROBO1Q9Y6N7 1651 aa36.49■■■■□ 3.43
KPNA4-202ENST00000469804 DCCP43146 1447 aa36.49■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms