RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 NEXMIFQ5QGS0 1516 aa14.95□□□□□ -0.02
THBS3-206ENST00000469769 PPLO60437 1756 aa14.95□□□□□ -0.02
THBS3-206ENST00000469769 NRXN1Q9ULB1 1477 aa14.95□□□□□ -0.02
THBS3-206ENST00000469769 ZNF142P52746 1687 aaPredicted RBP14.94□□□□□ -0.02
THBS3-206ENST00000469769 RGL3Q3MIN7 710 aa14.94□□□□□ -0.02
THBS3-206ENST00000469769 DCAF11Q8TEB1 546 aa14.93□□□□□ -0.02
THBS3-206ENST00000469769 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
THBS3-206ENST00000469769 ARHGAP23Q9P227 1491 aa14.92□□□□□ -0.02
THBS3-206ENST00000469769 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
THBS3-206ENST00000469769 SLIT1O75093 1534 aa14.92□□□□□ -0.02
THBS3-206ENST00000469769 NBPF8Q3BBV2 869 aa14.91□□□□□ -0.02
THBS3-206ENST00000469769 TMEM2Q9UHN6 1383 aa14.9□□□□□ -0.02
THBS3-206ENST00000469769 CHGAP10645 457 aaKnown RBP14.89□□□□□ -0.03
THBS3-206ENST00000469769 VGFO15240 615 aaPredicted RBP14.88□□□□□ -0.03
THBS3-206ENST00000469769 THEMISQ8N1K5 641 aaPredicted RBP14.88□□□□□ -0.03
THBS3-206ENST00000469769 PIK3C2GO75747 1445 aa14.88□□□□□ -0.03
THBS3-206ENST00000469769 KIAA1210Q9ULL0 1709 aa14.88□□□□□ -0.03
THBS3-206ENST00000469769 ADGRF5Q8IZF2 1346 aa14.88□□□□□ -0.03
THBS3-206ENST00000469769 RIMS2Q9UQ26 1411 aa14.87□□□□□ -0.03
THBS3-206ENST00000469769 ZNF326Q5BKZ1 582 aaKnown RBP14.87□□□□□ -0.03
THBS3-206ENST00000469769 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
THBS3-206ENST00000469769 RALGAPBQ86X10 1494 aa14.87□□□□□ -0.03
THBS3-206ENST00000469769 TRPM1Q7Z4N2 1603 aa14.86□□□□□ -0.03
THBS3-206ENST00000469769 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.86□□□□□ -0.03
THBS3-206ENST00000469769 KDM2AQ9Y2K7 1162 aa14.86□□□□□ -0.03
THBS3-206ENST00000469769 GPRASP1Q5JY77 1395 aa14.85□□□□□ -0.03
THBS3-206ENST00000469769 HDGFP51858 240 aaKnown RBP14.85□□□□□ -0.03
THBS3-206ENST00000469769 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
THBS3-206ENST00000469769 C14orf93Q9H972 538 aaKnown RBP14.83□□□□□ -0.04
THBS3-206ENST00000469769 SETBP1Q9Y6X0 1596 aa14.82□□□□□ -0.04
THBS3-206ENST00000469769 LAMC1P11047 1609 aa14.82□□□□□ -0.04
THBS3-206ENST00000469769 LTKP29376 864 aa14.81□□□□□ -0.04
THBS3-206ENST00000469769 PLEKHG1Q9ULL1 1385 aa14.81□□□□□ -0.04
THBS3-206ENST00000469769 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
THBS3-206ENST00000469769 MED14O60244 1454 aa14.8□□□□□ -0.04
THBS3-206ENST00000469769 SCAF11Q99590 1463 aaKnown RBP14.8□□□□□ -0.04
THBS3-206ENST00000469769 SETD1AO15047 1707 aaKnown RBP14.8□□□□□ -0.04
THBS3-206ENST00000469769 ADGRB1O14514 1584 aa14.79□□□□□ -0.04
THBS3-206ENST00000469769 TXNDC2Q86VQ3 553 aa14.79□□□□□ -0.04
THBS3-206ENST00000469769 NBPF1Q3BBV0 1214 aa14.78□□□□□ -0.04
THBS3-206ENST00000469769 CFAP70Q5T0N1 1121 aa14.78□□□□□ -0.04
THBS3-206ENST00000469769 EID1Q9Y6B2 187 aa14.78□□□□□ -0.04
THBS3-206ENST00000469769 ALKQ9UM73 1620 aa14.77□□□□□ -0.04
THBS3-206ENST00000469769 ADAMTS13Q76LX8 1427 aa14.77□□□□□ -0.04
THBS3-206ENST00000469769 ROCK2O75116 1388 aaKnown RBP14.76□□□□□ -0.05
THBS3-206ENST00000469769 NUTM2DQ5VT03 806 aaPredicted RBP14.76□□□□□ -0.05
THBS3-206ENST00000469769 ANKLE2Q86XL3 938 aa14.76□□□□□ -0.05
THBS3-206ENST00000469769 ASXL1Q8IXJ9 1541 aa14.75□□□□□ -0.05
THBS3-206ENST00000469769 IQGAP1P46940 1657 aa14.74□□□□□ -0.05
THBS3-206ENST00000469769 TBX22Q9Y458 520 aa14.74□□□□□ -0.05
THBS3-206ENST00000469769 POLR1AO95602 1720 aaPredicted RBP14.74□□□□□ -0.05
THBS3-206ENST00000469769 DIP2AQ14689 1571 aa14.73□□□□□ -0.05
THBS3-206ENST00000469769 CARD11Q9BXL7 1154 aa14.73□□□□□ -0.05
THBS3-206ENST00000469769 EIF4G2P78344 907 aaKnown RBP eCLIP14.71□□□□□ -0.05
THBS3-206ENST00000469769 USP47Q96K76 1375 aa14.71□□□□□ -0.06
THBS3-206ENST00000469769 METP08581 1390 aa14.7□□□□□ -0.06
THBS3-206ENST00000469769 ABCC11Q96J66 1382 aa14.7□□□□□ -0.06
THBS3-206ENST00000469769 PIK3R4Q99570 1358 aa14.7□□□□□ -0.06
THBS3-206ENST00000469769 TECPR2O15040 1411 aa14.69□□□□□ -0.06
THBS3-206ENST00000469769 NPHP4O75161 1426 aaPredicted RBP14.69□□□□□ -0.06
THBS3-206ENST00000469769 STRCQ7RTU9 1775 aa14.69□□□□□ -0.06
THBS3-206ENST00000469769 LRPPRCP42704 1394 aaKnown RBP14.69□□□□□ -0.06
THBS3-206ENST00000469769 YTHDC2Q9H6S0 1430 aaKnown RBP14.68□□□□□ -0.06
THBS3-206ENST00000469769 DLC1Q96QB1 1528 aa14.68□□□□□ -0.06
THBS3-206ENST00000469769 HSPA5P11021 654 aaKnown RBP14.68□□□□□ -0.06
THBS3-206ENST00000469769 TMEM132EQ6IEE7 984 aa14.68□□□□□ -0.06
THBS3-206ENST00000469769 SIRT1Q96EB6 747 aa14.68□□□□□ -0.06
THBS3-206ENST00000469769 KNDC1Q76NI1 1749 aa14.67□□□□□ -0.06
THBS3-206ENST00000469769 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
THBS3-206ENST00000469769 SBNO2Q9Y2G9 1366 aa14.66□□□□□ -0.06
THBS3-206ENST00000469769 HSPA2P54652 639 aa14.66□□□□□ -0.06
THBS3-206ENST00000469769 ARHGEF28Q8N1W1 1705 aaKnown RBP14.66□□□□□ -0.06
THBS3-206ENST00000469769 CHD2O14647 1828 aaKnown RBP14.65□□□□□ -0.06
THBS3-206ENST00000469769 SLC26A8Q96RN1 970 aa14.65□□□□□ -0.06
THBS3-206ENST00000469769 TESK2Q96S53 571 aa14.65□□□□□ -0.06
THBS3-206ENST00000469769 PTPRUQ92729 1446 aa14.65□□□□□ -0.06
THBS3-206ENST00000469769 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
THBS3-206ENST00000469769 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
THBS3-206ENST00000469769 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
THBS3-206ENST00000469769 FAM135BQ49AJ0 1406 aa14.64□□□□□ -0.07
THBS3-206ENST00000469769 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
THBS3-206ENST00000469769 EIF3AQ14152 1382 aaKnown RBP14.63□□□□□ -0.07
THBS3-206ENST00000469769 CPS1P31327 1500 aa14.63□□□□□ -0.07
THBS3-206ENST00000469769 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
THBS3-206ENST00000469769 PTCH1Q13635 1447 aa14.61□□□□□ -0.07
THBS3-206ENST00000469769 BCANQ96GW7 911 aa14.61□□□□□ -0.07
THBS3-206ENST00000469769 TRAK1Q9UPV9 953 aa14.61□□□□□ -0.07
THBS3-206ENST00000469769 NWD1Q149M9 1564 aa14.6□□□□□ -0.07
THBS3-206ENST00000469769 AMOTL2Q9Y2J4 779 aa14.59□□□□□ -0.07
THBS3-206ENST00000469769 CENPJQ9HC77 1338 aaPredicted RBP14.59□□□□□ -0.07
THBS3-206ENST00000469769 KCNA6P17658 529 aa14.58□□□□□ -0.08
THBS3-206ENST00000469769 HIRIP3Q9BW71 556 aaPredicted RBP14.58□□□□□ -0.08
THBS3-206ENST00000469769 SENP3Q9H4L4 574 aaPredicted RBP14.58□□□□□ -0.08
THBS3-206ENST00000469769 ROBO2Q9HCK4 1378 aa14.58□□□□□ -0.08
THBS3-206ENST00000469769 C11orf95C9JLR9 678 aaPredicted RBP14.57□□□□□ -0.08
THBS3-206ENST00000469769 STK26Q9P289 416 aa14.57□□□□□ -0.08
THBS3-206ENST00000469769 QRICH2Q9H0J4 1663 aa14.57□□□□□ -0.08
THBS3-206ENST00000469769 PUS7Q96PZ0 661 aaKnown RBP14.56□□□□□ -0.08
THBS3-206ENST00000469769 PRAM1Q96QH2 718 aa14.56□□□□□ -0.08
THBS3-206ENST00000469769 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms