RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 SLAIN2Q9P270 581 aa28.66■■■□□ 2.18
TTC28-205ENST00000469670 JCADQ9P266 1359 aa28.63■■■□□ 2.17
TTC28-205ENST00000469670 FGD6Q6ZV73 1430 aa28.62■■■□□ 2.17
TTC28-205ENST00000469670 APLP2Q06481 763 aa28.59■■■□□ 2.17
TTC28-205ENST00000469670 PHLPP1O60346 1717 aa28.58■■■□□ 2.17
TTC28-205ENST00000469670 PLEKHG1Q9ULL1 1385 aa28.57■■■□□ 2.16
TTC28-205ENST00000469670 ZFYVE9O95405 1425 aa28.56■■■□□ 2.16
TTC28-205ENST00000469670 PPP1R15AO75807 674 aaPredicted RBP28.55■■■□□ 2.16
TTC28-205ENST00000469670 SETD1AO15047 1707 aaKnown RBP28.55■■■□□ 2.16
TTC28-205ENST00000469670 HDGFP51858 240 aaKnown RBP28.53■■■□□ 2.16
TTC28-205ENST00000469670 RPRD2Q5VT52 1461 aaKnown RBP28.53■■■□□ 2.16
TTC28-205ENST00000469670 RIMS2Q9UQ26 1411 aa28.52■■■□□ 2.16
TTC28-205ENST00000469670 TBX22Q9Y458 520 aa28.5■■■□□ 2.15
TTC28-205ENST00000469670 ADGRL2O95490 1459 aa28.5■■■□□ 2.15
TTC28-205ENST00000469670 NCOA3Q9Y6Q9 1424 aa28.5■■■□□ 2.15
TTC28-205ENST00000469670 COL16A1Q07092 1604 aaPredicted RBP28.5■■■□□ 2.15
TTC28-205ENST00000469670 CHD2O14647 1828 aaKnown RBP28.48■■■□□ 2.15
TTC28-205ENST00000469670 SPATA31A6Q5VVP1 1343 aa28.48■■■□□ 2.15
TTC28-205ENST00000469670 C14orf37Q86TY3 774 aa28.48■■■□□ 2.15
TTC28-205ENST00000469670 LRP6O75581 1613 aa28.47■■■□□ 2.15
TTC28-205ENST00000469670 MEX3CQ5U5Q3 659 aaKnown RBP28.46■■■□□ 2.15
TTC28-205ENST00000469670 ANKRD50Q9ULJ7 1429 aa28.45■■■□□ 2.15
TTC28-205ENST00000469670 ZNF772Q68DY9 489 aaPredicted RBP28.45■■■□□ 2.14
TTC28-205ENST00000469670 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.44■■■□□ 2.14
TTC28-205ENST00000469670 TMEM131LA2VDJ0 1609 aa28.43■■■□□ 2.14
TTC28-205ENST00000469670 CADPS2Q86UW7 1296 aa28.43■■■□□ 2.14
TTC28-205ENST00000469670 GCC2Q8IWJ2 1684 aa28.42■■■□□ 2.14
TTC28-205ENST00000469670 CHGAP10645 457 aaKnown RBP28.42■■■□□ 2.14
TTC28-205ENST00000469670 UPF1Q92900 1129 aaKnown RBP eCLIP28.41■■■□□ 2.14
TTC28-205ENST00000469670 C19orf44Q9H6X5 657 aa28.41■■■□□ 2.14
TTC28-205ENST00000469670 ADAMTS13Q76LX8 1427 aa28.41■■■□□ 2.14
TTC28-205ENST00000469670 MYO5BQ9ULV0 1848 aa28.41■■■□□ 2.14
TTC28-205ENST00000469670 ATF3P18847 181 aa28.4■■■□□ 2.14
TTC28-205ENST00000469670 TRIM52Q96A61 297 aa28.4■■■□□ 2.14
TTC28-205ENST00000469670 FAM50AQ14320 339 aaKnown RBP28.39■■■□□ 2.14
TTC28-205ENST00000469670 NUTM2DQ5VT03 806 aaPredicted RBP28.39■■■□□ 2.14
TTC28-205ENST00000469670 AHDC1Q5TGY3 1603 aaPredicted RBP28.39■■■□□ 2.13
TTC28-205ENST00000469670 PIK3R4Q99570 1358 aa28.37■■■□□ 2.13
TTC28-205ENST00000469670 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.35■■■□□ 2.13
TTC28-205ENST00000469670 DIP2AQ14689 1571 aa28.34■■■□□ 2.13
TTC28-205ENST00000469670 SHPRHQ149N8 1683 aa28.33■■■□□ 2.13
TTC28-205ENST00000469670 RXRBP28702 533 aa28.32■■■□□ 2.12
TTC28-205ENST00000469670 BRINP3Q76B58 766 aa28.32■■■□□ 2.12
TTC28-205ENST00000469670 AMOTL2Q9Y2J4 779 aa28.31■■■□□ 2.12
TTC28-205ENST00000469670 NUTM2BA6NNL0 878 aaPredicted RBP28.29■■■□□ 2.12
TTC28-205ENST00000469670 NUTM2EB1AL46 878 aaPredicted RBP28.29■■■□□ 2.12
TTC28-205ENST00000469670 NUTM2AQ8IVF1 878 aaPredicted RBP28.29■■■□□ 2.12
TTC28-205ENST00000469670 UNC13BO14795 1591 aa28.28■■■□□ 2.12
TTC28-205ENST00000469670 TRPM2O94759 1503 aa28.28■■■□□ 2.12
TTC28-205ENST00000469670 PTPRUQ92729 1446 aa28.27■■■□□ 2.12
TTC28-205ENST00000469670 E9PCH4 1651 aa28.25■■■□□ 2.11
TTC28-205ENST00000469670 DCCP43146 1447 aa28.24■■■□□ 2.11
TTC28-205ENST00000469670 CDK12Q9NYV4 1490 aaPredicted RBP28.23■■■□□ 2.11
TTC28-205ENST00000469670 AFF2P51816 1311 aa28.22■■■□□ 2.11
TTC28-205ENST00000469670 ASXL1Q8IXJ9 1541 aa28.21■■■□□ 2.11
TTC28-205ENST00000469670 SETD5Q9C0A6 1442 aa28.2■■■□□ 2.11
TTC28-205ENST00000469670 MST1RQ04912 1400 aa28.18■■■□□ 2.1
TTC28-205ENST00000469670 IQGAP3Q86VI3 1631 aa28.17■■■□□ 2.1
TTC28-205ENST00000469670 LRRC59Q96AG4 307 aaKnown RBP28.16■■■□□ 2.1
TTC28-205ENST00000469670 NUP155O75694 1391 aa28.15■■■□□ 2.1
TTC28-205ENST00000469670 ROCK1Q13464 1354 aa28.15■■■□□ 2.1
TTC28-205ENST00000469670 XRN1Q8IZH2 1706 aaKnown RBP28.13■■■□□ 2.09
TTC28-205ENST00000469670 C8orf37Q96NL8 207 aa28.12■■■□□ 2.09
TTC28-205ENST00000469670 SETBP1Q9Y6X0 1596 aa28.11■■■□□ 2.09
TTC28-205ENST00000469670 NHSL1Q5SYE7 1610 aa28.1■■■□□ 2.09
TTC28-205ENST00000469670 NRXN3Q9Y4C0 1643 aa28.1■■■□□ 2.09
TTC28-205ENST00000469670 RBM6P78332 1123 aaKnown RBP28.1■■■□□ 2.09
TTC28-205ENST00000469670 QTRT2Q9H974 415 aaKnown RBP28.1■■■□□ 2.09
TTC28-205ENST00000469670 METP08581 1390 aa28.1■■■□□ 2.09
TTC28-205ENST00000469670 RGS12O14924 1447 aa28.09■■■□□ 2.09
TTC28-205ENST00000469670 DDX17Q92841 729 aaKnown RBP28.09■■■□□ 2.09
TTC28-205ENST00000469670 PNPLA6Q8IY17 1366 aa28.09■■■□□ 2.09
TTC28-205ENST00000469670 ZNF326Q5BKZ1 582 aaKnown RBP28.08■■■□□ 2.09
TTC28-205ENST00000469670 ADGRL3Q9HAR2 1447 aa28.06■■■□□ 2.08
TTC28-205ENST00000469670 NGLY1Q96IV0 654 aa28.01■■■□□ 2.07
TTC28-205ENST00000469670 ADAMTS2O95450 1211 aa28■■■□□ 2.07
TTC28-205ENST00000469670 ITGAEP38570 1179 aa27.99■■■□□ 2.07
TTC28-205ENST00000469670 C1orf167Q5SNV9 1468 aa27.97■■■□□ 2.07
TTC28-205ENST00000469670 SPHKAPQ2M3C7 1700 aa27.95■■■□□ 2.07
TTC28-205ENST00000469670 NALCNQ8IZF0 1738 aa27.95■■■□□ 2.07
TTC28-205ENST00000469670 NEXMIFQ5QGS0 1516 aa27.92■■■□□ 2.06
TTC28-205ENST00000469670 ATAD2Q6PL18 1390 aa27.92■■■□□ 2.06
TTC28-205ENST00000469670 USP21Q9UK80 565 aa27.92■■■□□ 2.06
TTC28-205ENST00000469670 SOS2Q07890 1332 aaPredicted RBP27.92■■■□□ 2.06
TTC28-205ENST00000469670 ORAI2Q96SN7 254 aa27.9■■■□□ 2.06
TTC28-205ENST00000469670 TRPC5Q9UL62 973 aaPredicted RBP27.89■■■□□ 2.06
TTC28-205ENST00000469670 PTCH1Q13635 1447 aa27.88■■■□□ 2.05
TTC28-205ENST00000469670 LAMC1P11047 1609 aa27.88■■■□□ 2.05
TTC28-205ENST00000469670 CLTCL1P53675 1640 aa27.87■■■□□ 2.05
TTC28-205ENST00000469670 ROBO2Q9HCK4 1378 aa27.86■■■□□ 2.05
TTC28-205ENST00000469670 FNBP4Q8N3X1 1017 aaPredicted RBP27.86■■■□□ 2.05
TTC28-205ENST00000469670 SRCAPQ6ZRS2 3230 aa27.85■■■□□ 2.05
TTC28-205ENST00000469670 ATRNO75882 1429 aa27.82■■■□□ 2.04
TTC28-205ENST00000469670 VGFO15240 615 aaPredicted RBP27.81■■■□□ 2.04
TTC28-205ENST00000469670 FOXD1Q16676 465 aa27.81■■■□□ 2.04
TTC28-205ENST00000469670 ZRANB1Q9UGI0 708 aa27.79■■■□□ 2.04
TTC28-205ENST00000469670 PRAG1Q86YV5 1406 aa27.78■■■□□ 2.04
TTC28-205ENST00000469670 COL22A1Q8NFW1 1626 aaPredicted RBP27.76■■■□□ 2.03
TTC28-205ENST00000469670 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
TTC28-205ENST00000469670 MYOM2P54296 1465 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms