RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 NEXMIFQ5QGS0 1516 aa17.46■□□□□ 0.39
MCF2L-222ENST00000469558 EID1Q9Y6B2 187 aa17.45■□□□□ 0.38
MCF2L-222ENST00000469558 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
MCF2L-222ENST00000469558 CPS1P31327 1500 aa17.45■□□□□ 0.38
MCF2L-222ENST00000469558 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
MCF2L-222ENST00000469558 KIF1BO60333 1816 aa17.44■□□□□ 0.38
MCF2L-222ENST00000469558 FBXO41Q8TF61 875 aa17.43■□□□□ 0.38
MCF2L-222ENST00000469558 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
MCF2L-222ENST00000469558 ADAMTS13Q76LX8 1427 aa17.42■□□□□ 0.38
MCF2L-222ENST00000469558 CHGAP10645 457 aaKnown RBP17.41■□□□□ 0.38
MCF2L-222ENST00000469558 LRRC7Q96NW7 1537 aa17.41■□□□□ 0.38
MCF2L-222ENST00000469558 XIRP1Q702N8 1843 aaKnown RBP17.4■□□□□ 0.38
MCF2L-222ENST00000469558 ALKQ9UM73 1620 aa17.39■□□□□ 0.38
MCF2L-222ENST00000469558 SPATA31E1Q6ZUB1 1445 aa17.39■□□□□ 0.38
MCF2L-222ENST00000469558 HRCP23327 699 aa17.39■□□□□ 0.37
MCF2L-222ENST00000469558 NUTM2DQ5VT03 806 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-222ENST00000469558 SLC26A8Q96RN1 970 aa17.39■□□□□ 0.37
MCF2L-222ENST00000469558 SETBP1Q9Y6X0 1596 aa17.39■□□□□ 0.37
MCF2L-222ENST00000469558 DIP2AQ14689 1571 aa17.38■□□□□ 0.37
MCF2L-222ENST00000469558 ACIN1Q9UKV3 1341 aaKnown RBP17.38■□□□□ 0.37
MCF2L-222ENST00000469558 PPLO60437 1756 aa17.38■□□□□ 0.37
MCF2L-222ENST00000469558 IFT172Q9UG01 1749 aa17.36■□□□□ 0.37
MCF2L-222ENST00000469558 CHD2O14647 1828 aaKnown RBP17.36■□□□□ 0.37
MCF2L-222ENST00000469558 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.36■□□□□ 0.37
MCF2L-222ENST00000469558 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-222ENST00000469558 CCDC144AA2RUR9 1427 aa17.36■□□□□ 0.37
MCF2L-222ENST00000469558 SETD1AO15047 1707 aaKnown RBP17.35■□□□□ 0.37
MCF2L-222ENST00000469558 ANKRD30BQ9BXX2 1392 aa17.34■□□□□ 0.37
MCF2L-222ENST00000469558 PPP1R15AO75807 674 aaPredicted RBP17.33■□□□□ 0.36
MCF2L-222ENST00000469558 NKTRP30414 1462 aaKnown RBP17.32■□□□□ 0.36
MCF2L-222ENST00000469558 PTPRUQ92729 1446 aa17.32■□□□□ 0.36
MCF2L-222ENST00000469558 TBX22Q9Y458 520 aa17.32■□□□□ 0.36
MCF2L-222ENST00000469558 XRN1Q8IZH2 1706 aaKnown RBP17.31■□□□□ 0.36
MCF2L-222ENST00000469558 KCNA6P17658 529 aa17.31■□□□□ 0.36
MCF2L-222ENST00000469558 HDGFP51858 240 aaKnown RBP17.31■□□□□ 0.36
MCF2L-222ENST00000469558 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
MCF2L-222ENST00000469558 METP08581 1390 aa17.28■□□□□ 0.36
MCF2L-222ENST00000469558 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
MCF2L-222ENST00000469558 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.36
MCF2L-222ENST00000469558 TMEM94Q12767 1356 aa17.27■□□□□ 0.35
MCF2L-222ENST00000469558 BCANQ96GW7 911 aa17.25■□□□□ 0.35
MCF2L-222ENST00000469558 ASXL1Q8IXJ9 1541 aa17.25■□□□□ 0.35
MCF2L-222ENST00000469558 NRXN1Q9ULB1 1477 aa17.24■□□□□ 0.35
MCF2L-222ENST00000469558 UBAP1LF5GYI3 381 aa17.24■□□□□ 0.35
MCF2L-222ENST00000469558 ADGRF5Q8IZF2 1346 aa17.23■□□□□ 0.35
MCF2L-222ENST00000469558 RBM33Q96EV2 1170 aaKnown RBP17.23■□□□□ 0.35
MCF2L-222ENST00000469558 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
MCF2L-222ENST00000469558 PRAG1Q86YV5 1406 aa17.22■□□□□ 0.35
MCF2L-222ENST00000469558 RGL3Q3MIN7 710 aa17.22■□□□□ 0.35
MCF2L-222ENST00000469558 MYOM2P54296 1465 aa17.22■□□□□ 0.35
MCF2L-222ENST00000469558 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-222ENST00000469558 PROSER2Q86WR7 435 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-222ENST00000469558 AMOTL2Q9Y2J4 779 aa17.19■□□□□ 0.34
MCF2L-222ENST00000469558 TRIM26Q12899 539 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-222ENST00000469558 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
MCF2L-222ENST00000469558 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
MCF2L-222ENST00000469558 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-222ENST00000469558 PTCH1Q13635 1447 aa17.16■□□□□ 0.34
MCF2L-222ENST00000469558 TOM1O60784 492 aa17.15■□□□□ 0.34
MCF2L-222ENST00000469558 NALCNQ8IZF0 1738 aa17.15■□□□□ 0.34
MCF2L-222ENST00000469558 ROBO2Q9HCK4 1378 aa17.14■□□□□ 0.33
MCF2L-222ENST00000469558 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
MCF2L-222ENST00000469558 LAMC1P11047 1609 aa17.13■□□□□ 0.33
MCF2L-222ENST00000469558 KNDC1Q76NI1 1749 aa17.13■□□□□ 0.33
MCF2L-222ENST00000469558 TECPR2O15040 1411 aa17.13■□□□□ 0.33
MCF2L-222ENST00000469558 ADGRB1O14514 1584 aa17.11■□□□□ 0.33
MCF2L-222ENST00000469558 MSH6P52701 1360 aa17.11■□□□□ 0.33
MCF2L-222ENST00000469558 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
MCF2L-222ENST00000469558 ADGRL3Q9HAR2 1447 aa17.1■□□□□ 0.33
MCF2L-222ENST00000469558 C14orf93Q9H972 538 aaKnown RBP17.09■□□□□ 0.33
MCF2L-222ENST00000469558 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
MCF2L-222ENST00000469558 DCCP43146 1447 aa17.09■□□□□ 0.33
MCF2L-222ENST00000469558 FAM135BQ49AJ0 1406 aa17.09■□□□□ 0.33
MCF2L-222ENST00000469558 HSPA1LP34931 641 aa17.08■□□□□ 0.32
MCF2L-222ENST00000469558 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
MCF2L-222ENST00000469558 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
MCF2L-222ENST00000469558 CFAP70Q5T0N1 1121 aa17.07■□□□□ 0.32
MCF2L-222ENST00000469558 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
MCF2L-222ENST00000469558 ABCC11Q96J66 1382 aa17.06■□□□□ 0.32
MCF2L-222ENST00000469558 C19orf44Q9H6X5 657 aa17.06■□□□□ 0.32
MCF2L-222ENST00000469558 MST1RQ04912 1400 aa17.05■□□□□ 0.32
MCF2L-222ENST00000469558 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
MCF2L-222ENST00000469558 PLEKHH1Q9ULM0 1364 aa17.04■□□□□ 0.32
MCF2L-222ENST00000469558 SIN3AQ96ST3 1273 aa17.04■□□□□ 0.32
MCF2L-222ENST00000469558 SLAIN2Q9P270 581 aa17.03■□□□□ 0.32
MCF2L-222ENST00000469558 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.32
MCF2L-222ENST00000469558 DLC1Q96QB1 1528 aa17.02■□□□□ 0.32
MCF2L-222ENST00000469558 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
MCF2L-222ENST00000469558 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
MCF2L-222ENST00000469558 CADPS2Q86UW7 1296 aa17.01■□□□□ 0.31
MCF2L-222ENST00000469558 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
MCF2L-222ENST00000469558 STAC3Q96MF2 364 aa17■□□□□ 0.31
MCF2L-222ENST00000469558 STK26Q9P289 416 aa17■□□□□ 0.31
MCF2L-222ENST00000469558 COL16A1Q07092 1604 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-222ENST00000469558 AHDC1Q5TGY3 1603 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-222ENST00000469558 WAPLQ7Z5K2 1190 aa16.99■□□□□ 0.31
MCF2L-222ENST00000469558 L3MBTL2Q969R5 705 aa16.98■□□□□ 0.31
MCF2L-222ENST00000469558 NHSL1Q5SYE7 1610 aa16.97■□□□□ 0.31
MCF2L-222ENST00000469558 PHLPP1O60346 1717 aa16.97■□□□□ 0.31
MCF2L-222ENST00000469558 ARHGEF28Q8N1W1 1705 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms