RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 SLC4A3P48751 1232 aa8.72□□□□□ -1.01
CD46-212ENST00000469535 ESCO1Q5FWF5 840 aa8.72□□□□□ -1.01
CD46-212ENST00000469535 RAB3GAP2Q9H2M9 1393 aa8.71□□□□□ -1.01
CD46-212ENST00000469535 RBM42Q9BTD8 480 aaKnown RBP8.71□□□□□ -1.01
CD46-212ENST00000469535 TCERG1O14776 1098 aaKnown RBP8.71□□□□□ -1.01
CD46-212ENST00000469535 L3MBTL2Q969R5 705 aa8.71□□□□□ -1.01
CD46-212ENST00000469535 PANK3Q9H999 370 aa8.71□□□□□ -1.02
CD46-212ENST00000469535 DDX58O95786 925 aaKnown RBP8.71□□□□□ -1.02
CD46-212ENST00000469535 RAPGEF2Q9Y4G8 1499 aa8.7□□□□□ -1.02
CD46-212ENST00000469535 IKQ13123 557 aaPredicted RBP8.7□□□□□ -1.02
CD46-212ENST00000469535 MCTP1Q6DN14 999 aa8.7□□□□□ -1.02
CD46-212ENST00000469535 SYAP1Q96A49 352 aaPredicted RBP8.7□□□□□ -1.02
CD46-212ENST00000469535 KIF3AQ9Y496 699 aa8.7□□□□□ -1.02
CD46-212ENST00000469535 LRRFIP1Q32MZ4 808 aaKnown RBP8.69□□□□□ -1.02
CD46-212ENST00000469535 VPS8Q8N3P4 1428 aa8.69□□□□□ -1.02
CD46-212ENST00000469535 CSPP1Q1MSJ5 1256 aa8.69□□□□□ -1.02
CD46-212ENST00000469535 NFXL1Q6ZNB6 911 aa8.69□□□□□ -1.02
CD46-212ENST00000469535 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
CD46-212ENST00000469535 DIAPH3Q9NSV4 1193 aa8.69□□□□□ -1.02
CD46-212ENST00000469535 IFIT2P09913 472 aaKnown RBP8.69□□□□□ -1.02
CD46-212ENST00000469535 FOXD4L6Q3SYB3 417 aaPredicted RBP8.69□□□□□ -1.02
CD46-212ENST00000469535 FOXD4L3Q6VB84 417 aaPredicted RBP8.69□□□□□ -1.02
CD46-212ENST00000469535 ANKRD45Q5TZF3 282 aa8.69□□□□□ -1.02
CD46-212ENST00000469535 WASHC2AQ641Q2 1341 aa8.68□□□□□ -1.02
CD46-212ENST00000469535 TPM3P06753 285 aa8.68□□□□□ -1.02
CD46-212ENST00000469535 TRIM29Q14134 588 aa8.68□□□□□ -1.02
CD46-212ENST00000469535 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.68□□□□□ -1.02
CD46-212ENST00000469535 ARID3AQ99856 593 aa8.68□□□□□ -1.02
CD46-212ENST00000469535 TIMELESSQ9UNS1 1208 aa8.68□□□□□ -1.02
CD46-212ENST00000469535 FANCD2Q9BXW9 1451 aa8.68□□□□□ -1.02
CD46-212ENST00000469535 HMGXB3Q12766 1538 aa8.68□□□□□ -1.02
CD46-212ENST00000469535 ST20-MTHFSA0A0A6YYL1 179 aa8.67□□□□□ -1.02
CD46-212ENST00000469535 DIAPH1O60610 1272 aaKnown RBP8.67□□□□□ -1.02
CD46-212ENST00000469535 TPM2P07951 284 aa8.67□□□□□ -1.02
CD46-212ENST00000469535 PRDM2Q13029 1718 aa8.67□□□□□ -1.02
CD46-212ENST00000469535 ERICH2A1L162 156 aa8.67□□□□□ -1.02
CD46-212ENST00000469535 FKBP5Q13451 457 aaPredicted RBP8.67□□□□□ -1.02
CD46-212ENST00000469535 PCMTD1Q96MG8 357 aaPredicted RBP8.67□□□□□ -1.02
CD46-212ENST00000469535 HMOX1P09601 288 aa8.67□□□□□ -1.02
CD46-212ENST00000469535 NEUROD6Q96NK8 337 aa8.67□□□□□ -1.02
CD46-212ENST00000469535 NLRP6P59044 892 aa8.67□□□□□ -1.02
CD46-212ENST00000469535 TSPYL4Q9UJ04 414 aa8.67□□□□□ -1.02
CD46-212ENST00000469535 G3BP1Q13283 466 aaKnown RBP eCLIP8.67□□□□□ -1.02
CD46-212ENST00000469535 ABTB2Q8N961 1025 aa8.67□□□□□ -1.02
CD46-212ENST00000469535 ST18O60284 1047 aa8.66□□□□□ -1.02
CD46-212ENST00000469535 TXNDC2Q86VQ3 553 aa8.66□□□□□ -1.02
CD46-212ENST00000469535 GPRASP1Q5JY77 1395 aa8.66□□□□□ -1.02
CD46-212ENST00000469535 TRDNQ13061 729 aa8.66□□□□□ -1.02
CD46-212ENST00000469535 TMEM132AQ24JP5 1023 aa8.66□□□□□ -1.02
CD46-212ENST00000469535 FOSBP53539 338 aa8.66□□□□□ -1.02
CD46-212ENST00000469535 ANO2Q9NQ90 1003 aa8.66□□□□□ -1.02
CD46-212ENST00000469535 TSR1Q2NL82 804 aaKnown RBP8.66□□□□□ -1.02
CD46-212ENST00000469535 CCER2I3L3R5 266 aa8.65□□□□□ -1.02
CD46-212ENST00000469535 KDM4AO75164 1064 aa8.65□□□□□ -1.02
CD46-212ENST00000469535 CPLX2Q6PUV4 134 aaKnown RBP8.65□□□□□ -1.02
CD46-212ENST00000469535 NLRP13Q86W25 1043 aa8.65□□□□□ -1.02
CD46-212ENST00000469535 KIF6Q6ZMV9 814 aa8.65□□□□□ -1.02
CD46-212ENST00000469535 CPLX1O14810 134 aa8.65□□□□□ -1.02
CD46-212ENST00000469535 PTMSP20962 102 aa8.65□□□□□ -1.02
CD46-212ENST00000469535 R3HCC1Q9Y3T6 440 aaKnown RBP8.65□□□□□ -1.02
CD46-212ENST00000469535 RIPK4P57078 832 aa8.65□□□□□ -1.03
CD46-212ENST00000469535 DDX54Q8TDD1 881 aaKnown RBP8.65□□□□□ -1.03
CD46-212ENST00000469535 WASHC4Q2M389 1173 aa8.64□□□□□ -1.03
CD46-212ENST00000469535 CABP2Q9NPB3 220 aa8.64□□□□□ -1.03
CD46-212ENST00000469535 TOM1L2Q6ZVM7 507 aa8.64□□□□□ -1.03
CD46-212ENST00000469535 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.64□□□□□ -1.031e-8■■■■■ 43.5
CD46-212ENST00000469535 ZNF428Q96B54 188 aa8.64□□□□□ -1.03
CD46-212ENST00000469535 CCDC47Q96A33 483 aaKnown RBP8.63□□□□□ -1.03
CD46-212ENST00000469535 WIZO95785 1651 aa8.63□□□□□ -1.03
CD46-212ENST00000469535 DHX57Q6P158 1386 aaKnown RBP8.63□□□□□ -1.03
CD46-212ENST00000469535 RBM5P52756 815 aaKnown RBP eCLIP8.63□□□□□ -1.034e-21■■■■□ 19.4
CD46-212ENST00000469535 TMEM132EQ6IEE7 984 aa8.63□□□□□ -1.03
CD46-212ENST00000469535 KIF15Q9NS87 1388 aa8.63□□□□□ -1.03
CD46-212ENST00000469535 RUFY2Q8WXA3 655 aa8.63□□□□□ -1.03
CD46-212ENST00000469535 ATP2B2Q01814 1243 aa8.62□□□□□ -1.03
CD46-212ENST00000469535 PDE3BQ13370 1112 aa8.62□□□□□ -1.03
CD46-212ENST00000469535 ZKSCAN2Q63HK3 967 aa8.62□□□□□ -1.03
CD46-212ENST00000469535 PAXIP1Q6ZW49 1069 aaPredicted RBP8.62□□□□□ -1.03
CD46-212ENST00000469535 GOLGA6L1Q8N7Z2 621 aa8.62□□□□□ -1.03
CD46-212ENST00000469535 GGNBP2Q9H3C7 697 aa8.62□□□□□ -1.03
CD46-212ENST00000469535 PAF1Q8N7H5 531 aa8.61□□□□□ -1.03
CD46-212ENST00000469535 WWC2Q6AWC2 1192 aa8.61□□□□□ -1.03
CD46-212ENST00000469535 IBSPP21815 317 aaPredicted RBP8.61□□□□□ -1.03
CD46-212ENST00000469535 CHMP4CQ96CF2 233 aa8.61□□□□□ -1.03
CD46-212ENST00000469535 ZKSCAN1P17029 563 aaPredicted RBP8.6□□□□□ -1.03
CD46-212ENST00000469535 MYBBP1AQ9BQG0 1328 aaKnown RBP8.6□□□□□ -1.03
CD46-212ENST00000469535 TPM1P09493 284 aa8.6□□□□□ -1.03
CD46-212ENST00000469535 CCAR2Q8N163 923 aaKnown RBP8.6□□□□□ -1.03
CD46-212ENST00000469535 BICRAQ9NZM4 1560 aa8.6□□□□□ -1.03
CD46-212ENST00000469535 PHLDB1Q86UU1 1377 aa8.6□□□□□ -1.03
CD46-212ENST00000469535 XPCQ01831 940 aaPredicted RBP8.6□□□□□ -1.03
CD46-212ENST00000469535 TATP17735 454 aaPredicted RBP8.6□□□□□ -1.03
CD46-212ENST00000469535 APAF1O14727 1248 aa8.59□□□□□ -1.03
CD46-212ENST00000469535 BICDL1Q6ZP65 573 aa8.59□□□□□ -1.03
CD46-212ENST00000469535 GOLGA6L19H0YKK7 550 aa8.59□□□□□ -1.03
CD46-212ENST00000469535 STK11IPQ8N1F8 1099 aa8.59□□□□□ -1.03
CD46-212ENST00000469535 CABP4P57796 275 aa8.59□□□□□ -1.03
CD46-212ENST00000469535 COG6Q9Y2V7 657 aa8.59□□□□□ -1.03
CD46-212ENST00000469535 BECN2A8MW95 431 aa8.59□□□□□ -1.03
CD46-212ENST00000469535 SMG6Q86US8 1419 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms