RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 SNRKQ9NRH2 765 aa13.91□□□□□ -0.18
ITGA4-205ENST00000468948 NBPF26B4DH59 902 aa13.9□□□□□ -0.18
ITGA4-205ENST00000468948 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
ITGA4-205ENST00000468948 PPP2R2DQ66LE6 453 aa13.9□□□□□ -0.18
ITGA4-205ENST00000468948 FNBP4Q8N3X1 1017 aaPredicted RBP13.9□□□□□ -0.18
ITGA4-205ENST00000468948 TATDN2Q93075 761 aa13.9□□□□□ -0.18
ITGA4-205ENST00000468948 PNMA3Q9UL41 463 aa13.9□□□□□ -0.18
ITGA4-205ENST00000468948 C3orf80F5H4A9 247 aa13.89□□□□□ -0.19
ITGA4-205ENST00000468948 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
ITGA4-205ENST00000468948 PACS2Q86VP3 889 aa13.89□□□□□ -0.19
ITGA4-205ENST00000468948 COG6Q9Y2V7 657 aa13.89□□□□□ -0.19
ITGA4-205ENST00000468948 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
ITGA4-205ENST00000468948 SPTLC1O15269 473 aa13.88□□□□□ -0.19
ITGA4-205ENST00000468948 TUSC1Q2TAM9 212 aa13.88□□□□□ -0.19
ITGA4-205ENST00000468948 MAMSTRQ6ZN01 415 aa13.87□□□□□ -0.19
ITGA4-205ENST00000468948 RSBN1LQ6PCB5 846 aaPredicted RBP13.86□□□□□ -0.19
ITGA4-205ENST00000468948 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
ITGA4-205ENST00000468948 CSPP1Q1MSJ5 1256 aa13.85□□□□□ -0.19
ITGA4-205ENST00000468948 TMEM134Q9H6X4 195 aa13.85□□□□□ -0.19
ITGA4-205ENST00000468948 MOXD2PA6NHM9 499 aa13.84□□□□□ -0.19
ITGA4-205ENST00000468948 SMAPO00193 183 aa13.82□□□□□ -0.2
ITGA4-205ENST00000468948 NDUFV2P19404 249 aa13.82□□□□□ -0.2
ITGA4-205ENST00000468948 RDH13Q8NBN7 331 aa13.82□□□□□ -0.2
ITGA4-205ENST00000468948 TRIM26Q12899 539 aaPredicted RBP13.81□□□□□ -0.2
ITGA4-205ENST00000468948 GJA5P36382 358 aa13.8□□□□□ -0.2
ITGA4-205ENST00000468948 CCDC97Q96F63 343 aaPredicted RBP13.8□□□□□ -0.2
ITGA4-205ENST00000468948 SERPINA10Q9UK55 444 aa13.8□□□□□ -0.2
ITGA4-205ENST00000468948 SNPHO15079 494 aa13.79□□□□□ -0.2
ITGA4-205ENST00000468948 LILRB3O75022 631 aa13.79□□□□□ -0.2
ITGA4-205ENST00000468948 HOXB1P14653 301 aaPredicted RBP13.79□□□□□ -0.2
ITGA4-205ENST00000468948 PROX2Q3B8N5 592 aa13.79□□□□□ -0.2
ITGA4-205ENST00000468948 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
ITGA4-205ENST00000468948 KCNK17Q96T54 332 aa13.79□□□□□ -0.2
ITGA4-205ENST00000468948 ZNF330Q9Y3S2 320 aaPredicted RBP13.79□□□□□ -0.2
ITGA4-205ENST00000468948 PCDHB15Q9Y5E8 787 aa13.79□□□□□ -0.2
ITGA4-205ENST00000468948 QPCTQ16769 361 aa13.78□□□□□ -0.2
ITGA4-205ENST00000468948 NUTM2BA6NNL0 878 aaPredicted RBP13.76□□□□□ -0.21
ITGA4-205ENST00000468948 NUTM2EB1AL46 878 aaPredicted RBP13.76□□□□□ -0.21
ITGA4-205ENST00000468948 KDM4AO75164 1064 aa13.76□□□□□ -0.21
ITGA4-205ENST00000468948 AP1G2O75843 785 aa13.76□□□□□ -0.21
ITGA4-205ENST00000468948 NUTM2DQ5VT03 806 aaPredicted RBP13.76□□□□□ -0.21
ITGA4-205ENST00000468948 NUTM2AQ8IVF1 878 aaPredicted RBP13.76□□□□□ -0.21
ITGA4-205ENST00000468948 KCNH8Q96L42 1107 aa13.76□□□□□ -0.21
ITGA4-205ENST00000468948 GDPD2Q9HCC8 539 aa13.76□□□□□ -0.21
ITGA4-205ENST00000468948 PDIA4P13667 645 aaKnown RBP13.75□□□□□ -0.21
ITGA4-205ENST00000468948 RTL5Q5HYW3 569 aaPredicted RBP13.75□□□□□ -0.21
ITGA4-205ENST00000468948 RSPH4AQ5TD94 716 aa13.75□□□□□ -0.21
ITGA4-205ENST00000468948 PRM3Q9NNZ6 103 aa13.75□□□□□ -0.21
ITGA4-205ENST00000468948 WWC1Q8IX03 1113 aa13.74□□□□□ -0.21
ITGA4-205ENST00000468948 PLSCR2Q9NRY7 297 aa13.74□□□□□ -0.21
ITGA4-205ENST00000468948 KIAA1468Q9P260 1216 aa13.74□□□□□ -0.21
ITGA4-205ENST00000468948 HRCP23327 699 aa13.73□□□□□ -0.21
ITGA4-205ENST00000468948 GCGRP47871 477 aa13.72□□□□□ -0.21
ITGA4-205ENST00000468948 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
ITGA4-205ENST00000468948 ABL2P42684 1182 aa13.71□□□□□ -0.21
ITGA4-205ENST00000468948 USP46P62068 366 aa13.71□□□□□ -0.21
ITGA4-205ENST00000468948 PRPF38BQ5VTL8 546 aaKnown RBP13.71□□□□□ -0.21
ITGA4-205ENST00000468948 SOCS7O14512 581 aa13.7□□□□□ -0.22
ITGA4-205ENST00000468948 HOXA2O43364 376 aa13.69□□□□□ -0.22
ITGA4-205ENST00000468948 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
ITGA4-205ENST00000468948 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
ITGA4-205ENST00000468948 USP17L8P0C7I0 530 aa13.68□□□□□ -0.22
ITGA4-205ENST00000468948 FDX1P10109 184 aa13.68□□□□□ -0.22
ITGA4-205ENST00000468948 SWT1Q5T5J6 900 aaKnown RBP13.67□□□□□ -0.22
ITGA4-205ENST00000468948 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
ITGA4-205ENST00000468948 SLC10A3P09131 477 aa13.65□□□□□ -0.22
ITGA4-205ENST00000468948 PSEN2P49810 448 aa13.65□□□□□ -0.22
ITGA4-205ENST00000468948 HDGFP51858 240 aaKnown RBP13.63□□□□□ -0.23
ITGA4-205ENST00000468948 RABGEF1Q9UJ41 708 aa13.63□□□□□ -0.23
ITGA4-205ENST00000468948 PCDHGC3Q9UN70 934 aa13.63□□□□□ -0.23
ITGA4-205ENST00000468948 GUCA2AQ02747 115 aa13.62□□□□□ -0.23
ITGA4-205ENST00000468948 CALR3Q96L12 384 aaKnown RBP13.62□□□□□ -0.23
ITGA4-205ENST00000468948 HLA-CQ95604 372 aa13.61□□□□□ -0.23
ITGA4-205ENST00000468948 SEPT9Q9UHD8 586 aaPredicted RBP13.61□□□□□ -0.23
ITGA4-205ENST00000468948 POM121CA8CG34 1229 aa13.6□□□□□ -0.23
ITGA4-205ENST00000468948 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
ITGA4-205ENST00000468948 NDUFB9Q9Y6M9 179 aa13.6□□□□□ -0.23
ITGA4-205ENST00000468948 ZBTB7CA1YPR0 619 aa13.59□□□□□ -0.23
ITGA4-205ENST00000468948 ARHGAP33O14559 1287 aa13.59□□□□□ -0.23
ITGA4-205ENST00000468948 CTDSPL2Q05D32 466 aa13.58□□□□□ -0.24
ITGA4-205ENST00000468948 MTMR2Q13614 643 aa13.58□□□□□ -0.24
ITGA4-205ENST00000468948 GJD4Q96KN9 370 aaPredicted RBP13.58□□□□□ -0.24
ITGA4-205ENST00000468948 GLMNQ92990 594 aa13.57□□□□□ -0.24
ITGA4-205ENST00000468948 SLC4A5Q9BY07 1137 aa13.57□□□□□ -0.24
ITGA4-205ENST00000468948 GRIPAP1Q4V328 841 aa13.56□□□□□ -0.24
ITGA4-205ENST00000468948 TSC1Q92574 1164 aa13.56□□□□□ -0.24
ITGA4-205ENST00000468948 ERBB3P21860 1342 aa13.56□□□□□ -0.24
ITGA4-205ENST00000468948 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
ITGA4-205ENST00000468948 SLF2Q8IX21 1173 aa13.55□□□□□ -0.24
ITGA4-205ENST00000468948 HELBQ8NG08 1087 aaPredicted RBP13.55□□□□□ -0.24
ITGA4-205ENST00000468948 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
ITGA4-205ENST00000468948 DMRTA1Q5VZB9 504 aa13.54□□□□□ -0.24
ITGA4-205ENST00000468948 TRAIPQ9BWF2 469 aa13.54□□□□□ -0.24
ITGA4-205ENST00000468948 HMX1Q9NP08 348 aaPredicted RBP13.54□□□□□ -0.24
ITGA4-205ENST00000468948 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
ITGA4-205ENST00000468948 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
ITGA4-205ENST00000468948 FUT2Q10981 343 aa13.52□□□□□ -0.25
ITGA4-205ENST00000468948 IRF5Q13568 498 aa13.52□□□□□ -0.25
ITGA4-205ENST00000468948 SAMD7Q7Z3H4 446 aa13.52□□□□□ -0.25
ITGA4-205ENST00000468948 NECTIN2Q92692 538 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms