RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 MMRN1Q13201 1228 aa12.49□□□□□ -0.41
XRN1-207ENST00000468894 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
XRN1-207ENST00000468894 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
XRN1-207ENST00000468894 TMUB1Q9BVT8 246 aa12.49□□□□□ -0.41
XRN1-207ENST00000468894 REPIN1Q9BWE0 567 aaKnown RBP12.49□□□□□ -0.41
XRN1-207ENST00000468894 PDE4DQ08499 809 aa12.48□□□□□ -0.41
XRN1-207ENST00000468894 THSD4Q6ZMP0 1018 aa12.48□□□□□ -0.41
XRN1-207ENST00000468894 PARP9Q8IXQ6 854 aa12.48□□□□□ -0.41
XRN1-207ENST00000468894 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.48□□□□□ -0.41
XRN1-207ENST00000468894 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
XRN1-207ENST00000468894 DAXXQ9UER7 740 aaPredicted RBP12.47□□□□□ -0.41
XRN1-207ENST00000468894 CLCN1P35523 988 aa12.46□□□□□ -0.41
XRN1-207ENST00000468894 TTLL12Q14166 644 aaPredicted RBP12.46□□□□□ -0.41
XRN1-207ENST00000468894 RNF40O75150 1001 aa12.44□□□□□ -0.42
XRN1-207ENST00000468894 HDGFP51858 240 aaKnown RBP12.44□□□□□ -0.42
XRN1-207ENST00000468894 SLF2Q8IX21 1173 aa12.44□□□□□ -0.42
XRN1-207ENST00000468894 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
XRN1-207ENST00000468894 HPS5Q9UPZ3 1129 aa12.42□□□□□ -0.42
XRN1-207ENST00000468894 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
XRN1-207ENST00000468894 DDX11L8A8MPP1 907 aa12.4□□□□□ -0.42
XRN1-207ENST00000468894 SLC10A3P09131 477 aa12.4□□□□□ -0.42
XRN1-207ENST00000468894 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
XRN1-207ENST00000468894 TSR3Q9UJK0 312 aaKnown RBP12.4□□□□□ -0.42
XRN1-207ENST00000468894 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
XRN1-207ENST00000468894 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
XRN1-207ENST00000468894 WBP1LQ9NX94 342 aa12.38□□□□□ -0.43
XRN1-207ENST00000468894 PTPN5P54829 565 aa12.37□□□□□ -0.43
XRN1-207ENST00000468894 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
XRN1-207ENST00000468894 MS4A1P11836 297 aa12.36□□□□□ -0.43
XRN1-207ENST00000468894 CD46P15529 392 aa12.36□□□□□ -0.43
XRN1-207ENST00000468894 PPP4CP60510 307 aa12.36□□□□□ -0.43
XRN1-207ENST00000468894 SSTR3P32745 418 aaPredicted RBP12.35□□□□□ -0.43
XRN1-207ENST00000468894 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
XRN1-207ENST00000468894 KDM4CQ9H3R0 1056 aa12.35□□□□□ -0.43
XRN1-207ENST00000468894 CFHP08603 1231 aa12.34□□□□□ -0.43
XRN1-207ENST00000468894 NEUROD2Q15784 382 aa12.34□□□□□ -0.43
XRN1-207ENST00000468894 NECTIN2Q92692 538 aa12.32□□□□□ -0.44
XRN1-207ENST00000468894 APLP1P51693 650 aa12.31□□□□□ -0.44
XRN1-207ENST00000468894 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
XRN1-207ENST00000468894 RSPH4AQ5TD94 716 aa12.3□□□□□ -0.44
XRN1-207ENST00000468894 GCGRP47871 477 aa12.29□□□□□ -0.44
XRN1-207ENST00000468894 NYAP1Q6ZVC0 841 aa12.28□□□□□ -0.44
XRN1-207ENST00000468894 PLSCR2Q9NRY7 297 aa12.28□□□□□ -0.44
XRN1-207ENST00000468894 KMT5BQ4FZB7 885 aa12.27□□□□□ -0.45
XRN1-207ENST00000468894 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.45
XRN1-207ENST00000468894 ACTN4O43707 911 aaKnown RBP12.26□□□□□ -0.45
XRN1-207ENST00000468894 PRR14Q9BWN1 585 aa12.25□□□□□ -0.45
XRN1-207ENST00000468894 FAM117AQ9C073 453 aa12.24□□□□□ -0.45
XRN1-207ENST00000468894 FUT2Q10981 343 aa12.23□□□□□ -0.45
XRN1-207ENST00000468894 KDM4AO75164 1064 aa12.22□□□□□ -0.45
XRN1-207ENST00000468894 PLEKHG3A1L390 1219 aa12.2□□□□□ -0.46
XRN1-207ENST00000468894 SPIRE2Q8WWL2 714 aa12.2□□□□□ -0.46
XRN1-207ENST00000468894 PCDHB3Q9Y5E6 796 aa12.2□□□□□ -0.46
XRN1-207ENST00000468894 DDRGK1Q96HY6 314 aa12.19□□□□□ -0.46
XRN1-207ENST00000468894 HOXA2O43364 376 aa12.18□□□□□ -0.46
XRN1-207ENST00000468894 PUS10Q3MIT2 529 aaKnown RBP12.18□□□□□ -0.46
XRN1-207ENST00000468894 NUTM1Q86Y26 1132 aa12.18□□□□□ -0.46
XRN1-207ENST00000468894 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
XRN1-207ENST00000468894 USP46P62068 366 aa12.17□□□□□ -0.46
XRN1-207ENST00000468894 BLOC1S3Q6QNY0 202 aa12.17□□□□□ -0.46
XRN1-207ENST00000468894 HLA-CQ95604 372 aa12.17□□□□□ -0.46
XRN1-207ENST00000468894 MTRQ99707 1265 aa12.17□□□□□ -0.46
XRN1-207ENST00000468894 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
XRN1-207ENST00000468894 COPS2P61201 443 aa12.16□□□□□ -0.46
XRN1-207ENST00000468894 MORN1Q5T089 497 aa12.16□□□□□ -0.46
XRN1-207ENST00000468894 TJAP1Q5JTD0 557 aa12.15□□□□□ -0.46
XRN1-207ENST00000468894 MOXD2PA6NHM9 499 aa12.13□□□□□ -0.47
XRN1-207ENST00000468894 GUCA2AQ02747 115 aa12.13□□□□□ -0.47
XRN1-207ENST00000468894 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
XRN1-207ENST00000468894 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
XRN1-207ENST00000468894 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
XRN1-207ENST00000468894 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
XRN1-207ENST00000468894 NDUFV2P19404 249 aa12.11□□□□□ -0.47
XRN1-207ENST00000468894 GRIPAP1Q4V328 841 aa12.11□□□□□ -0.47
XRN1-207ENST00000468894 IL21Q9HBE4 155 aa12.11□□□□□ -0.47
XRN1-207ENST00000468894 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
XRN1-207ENST00000468894 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
XRN1-207ENST00000468894 SH3D19Q5HYK7 790 aa12.09□□□□□ -0.47
XRN1-207ENST00000468894 RSBN1LQ6PCB5 846 aaPredicted RBP12.09□□□□□ -0.47
XRN1-207ENST00000468894 SPTLC1O15269 473 aa12.08□□□□□ -0.48
XRN1-207ENST00000468894 TLL1O43897 1013 aa12.08□□□□□ -0.48
XRN1-207ENST00000468894 NR1I2O75469 434 aa12.08□□□□□ -0.48
XRN1-207ENST00000468894 SCUBE3Q8IX30 993 aa12.08□□□□□ -0.48
XRN1-207ENST00000468894 PCDHGC3Q9UN70 934 aa12.08□□□□□ -0.48
XRN1-207ENST00000468894 ZPR1O75312 459 aa12.07□□□□□ -0.48
XRN1-207ENST00000468894 FDX1P10109 184 aa12.07□□□□□ -0.48
XRN1-207ENST00000468894 RSPH6AQ9H0K4 717 aa12.07□□□□□ -0.48
XRN1-207ENST00000468894 LIMD1Q9UGP4 676 aa12.07□□□□□ -0.48
XRN1-207ENST00000468894 GJA5P36382 358 aa12.05□□□□□ -0.48
XRN1-207ENST00000468894 CLK2P49760 499 aaKnown RBP12.05□□□□□ -0.48
XRN1-207ENST00000468894 KCNC4Q03721 635 aa12.05□□□□□ -0.48
XRN1-207ENST00000468894 RNF19BQ6ZMZ0 732 aa12.05□□□□□ -0.48
XRN1-207ENST00000468894 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
XRN1-207ENST00000468894 THAP11Q96EK4 314 aa12.05□□□□□ -0.48
XRN1-207ENST00000468894 POLR3EQ9NVU0 708 aa12.04□□□□□ -0.48
XRN1-207ENST00000468894 SKIV2LQ15477 1246 aaKnown RBP12.03□□□□□ -0.48
XRN1-207ENST00000468894 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
XRN1-207ENST00000468894 PLA2G2EQ9NZK7 142 aa12.03□□□□□ -0.48
XRN1-207ENST00000468894 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
XRN1-207ENST00000468894 GOPCQ9HD26 462 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms