RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 KANK1Q14678 1352 aa13.08□□□□□ -0.32
TRAPPC10-207ENST00000468864 A0A0G2JS52 829 aa13.08□□□□□ -0.32
TRAPPC10-207ENST00000468864 ESPNB1AK53 854 aa13.08□□□□□ -0.32
TRAPPC10-207ENST00000468864 LMOD2Q6P5Q4 547 aa13.08□□□□□ -0.32
TRAPPC10-207ENST00000468864 RTF1Q92541 710 aaKnown RBP13.07□□□□□ -0.32
TRAPPC10-207ENST00000468864 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
TRAPPC10-207ENST00000468864 CUL7Q14999 1698 aa13.07□□□□□ -0.32
TRAPPC10-207ENST00000468864 GOLGA6L6A8MZA4 724 aa13.07□□□□□ -0.32
TRAPPC10-207ENST00000468864 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC10-207ENST00000468864 GRPEL1Q9HAV7 217 aa13.06□□□□□ -0.32
TRAPPC10-207ENST00000468864 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
TRAPPC10-207ENST00000468864 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC10-207ENST00000468864 EFCAB2Q5VUJ9 269 aa13.06□□□□□ -0.32
TRAPPC10-207ENST00000468864 RAD54L2Q9Y4B4 1467 aa13.06□□□□□ -0.32
TRAPPC10-207ENST00000468864 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
TRAPPC10-207ENST00000468864 RIPK4P57078 832 aa13.06□□□□□ -0.32
TRAPPC10-207ENST00000468864 RUNDC1Q96C34 613 aa13.05□□□□□ -0.32
TRAPPC10-207ENST00000468864 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
TRAPPC10-207ENST00000468864 SAMD9Q5K651 1589 aa13.05□□□□□ -0.32
TRAPPC10-207ENST00000468864 NUTM2FA1L443 756 aa13.05□□□□□ -0.32
TRAPPC10-207ENST00000468864 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
TRAPPC10-207ENST00000468864 EIF3AQ14152 1382 aaKnown RBP13.04□□□□□ -0.32
TRAPPC10-207ENST00000468864 MLECQ14165 292 aa13.04□□□□□ -0.32
TRAPPC10-207ENST00000468864 MTHFSP49914 203 aa13.04□□□□□ -0.32
TRAPPC10-207ENST00000468864 HMMRO75330 724 aa13.04□□□□□ -0.32
TRAPPC10-207ENST00000468864 HAP1P54257 671 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC10-207ENST00000468864 ZNF592Q92610 1267 aa13.04□□□□□ -0.32
TRAPPC10-207ENST00000468864 C1orf115Q9H7X2 142 aa13.04□□□□□ -0.32
TRAPPC10-207ENST00000468864 NAIPQ13075 1403 aa13.04□□□□□ -0.32
TRAPPC10-207ENST00000468864 TARBP1Q13395 1621 aaKnown RBP13.03□□□□□ -0.32
TRAPPC10-207ENST00000468864 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
TRAPPC10-207ENST00000468864 PRPF40AO75400 957 aaKnown RBP13.02□□□□□ -0.32
TRAPPC10-207ENST00000468864 PDE3AQ14432 1141 aa13.02□□□□□ -0.32
TRAPPC10-207ENST00000468864 CASKIN1Q8WXD9 1431 aa13.02□□□□□ -0.33
TRAPPC10-207ENST00000468864 PHF14O94880 888 aa13.02□□□□□ -0.33
TRAPPC10-207ENST00000468864 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
TRAPPC10-207ENST00000468864 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
TRAPPC10-207ENST00000468864 STK31Q9BXU1 1019 aa13.01□□□□□ -0.33
TRAPPC10-207ENST00000468864 ANO2Q9NQ90 1003 aa13.01□□□□□ -0.33
TRAPPC10-207ENST00000468864 TNNT3P45378 269 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC10-207ENST00000468864 ANKRD50Q9ULJ7 1429 aa13.01□□□□□ -0.33
TRAPPC10-207ENST00000468864 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
TRAPPC10-207ENST00000468864 ZNF771Q7L3S4 317 aaPredicted RBP13□□□□□ -0.33
TRAPPC10-207ENST00000468864 GGNBP2Q9H3C7 697 aa13□□□□□ -0.33
TRAPPC10-207ENST00000468864 WDR62O43379 1518 aa13□□□□□ -0.33
TRAPPC10-207ENST00000468864 NUCB2P80303 420 aa13□□□□□ -0.33
TRAPPC10-207ENST00000468864 CARMIL2Q6F5E8 1435 aa12.99□□□□□ -0.33
TRAPPC10-207ENST00000468864 HMOX1P09601 288 aa12.99□□□□□ -0.33
TRAPPC10-207ENST00000468864 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
TRAPPC10-207ENST00000468864 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
TRAPPC10-207ENST00000468864 ABCA10Q8WWZ4 1543 aa12.99□□□□□ -0.33
TRAPPC10-207ENST00000468864 PANK2Q9BZ23 570 aa12.99□□□□□ -0.33
TRAPPC10-207ENST00000468864 CFAP70Q5T0N1 1121 aa12.98□□□□□ -0.33
TRAPPC10-207ENST00000468864 TMEM132EQ6IEE7 984 aa12.98□□□□□ -0.33
TRAPPC10-207ENST00000468864 REC8O95072 547 aa12.98□□□□□ -0.33
TRAPPC10-207ENST00000468864 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC10-207ENST00000468864 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
TRAPPC10-207ENST00000468864 RRP9O43818 475 aaKnown RBP12.97□□□□□ -0.33
TRAPPC10-207ENST00000468864 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
TRAPPC10-207ENST00000468864 CSPP1Q1MSJ5 1256 aa12.97□□□□□ -0.33
TRAPPC10-207ENST00000468864 NGEFQ8N5V2 710 aa12.97□□□□□ -0.33
TRAPPC10-207ENST00000468864 KIF16BQ96L93 1317 aa12.97□□□□□ -0.33
TRAPPC10-207ENST00000468864 TPM2P07951 284 aa12.97□□□□□ -0.33
TRAPPC10-207ENST00000468864 MIA2Q96PC5 1412 aa12.97□□□□□ -0.33
TRAPPC10-207ENST00000468864 SLC12A5Q9H2X9 1139 aa12.96□□□□□ -0.33
TRAPPC10-207ENST00000468864 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
TRAPPC10-207ENST00000468864 IGHDP01880 384 aa12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 ZMYND15Q9H091 742 aa12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 PBRM1Q86U86 1689 aa12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 VPS37CA5D8V6 355 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 NEK4P51957 841 aa12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 PDS5BQ9NTI5 1447 aa12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 LTV1Q96GA3 475 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 MAPKBP1O60336 1514 aa12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 NCOA1Q15788 1441 aa12.95□□□□□ -0.34
TRAPPC10-207ENST00000468864 NOB1Q9ULX3 412 aaKnown RBP12.94□□□□□ -0.34
TRAPPC10-207ENST00000468864 CCDC9Q9Y3X0 531 aaKnown RBP12.94□□□□□ -0.34
TRAPPC10-207ENST00000468864 NESP48681 1621 aa12.94□□□□□ -0.34
TRAPPC10-207ENST00000468864 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
TRAPPC10-207ENST00000468864 CCDC173Q0VFZ6 552 aa12.94□□□□□ -0.34
TRAPPC10-207ENST00000468864 CDC45O75419 566 aa12.94□□□□□ -0.34
TRAPPC10-207ENST00000468864 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
TRAPPC10-207ENST00000468864 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
TRAPPC10-207ENST00000468864 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
TRAPPC10-207ENST00000468864 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
TRAPPC10-207ENST00000468864 GNL2Q13823 731 aaKnown RBP12.93□□□□□ -0.34
TRAPPC10-207ENST00000468864 PRDM10Q9NQV6 1147 aa12.93□□□□□ -0.34
TRAPPC10-207ENST00000468864 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
TRAPPC10-207ENST00000468864 WASHC2CQ9Y4E1 1318 aa12.93□□□□□ -0.34
TRAPPC10-207ENST00000468864 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
TRAPPC10-207ENST00000468864 BECN2A8MW95 431 aa12.92□□□□□ -0.34
TRAPPC10-207ENST00000468864 XRCC6P12956 609 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAPPC10-207ENST00000468864 CCDC27Q2M243 656 aa12.92□□□□□ -0.34
TRAPPC10-207ENST00000468864 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
TRAPPC10-207ENST00000468864 UQCRHLA0A096LP55 91 aa12.92□□□□□ -0.34
TRAPPC10-207ENST00000468864 GOLGA6L19H0YKK7 550 aa12.92□□□□□ -0.34
TRAPPC10-207ENST00000468864 UQCRHP07919 91 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms