RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 CEP170BQ9Y4F5 1589 aaPredicted RBP25.08■■□□□ 1.6
RPL39-202ENST00000468844 PRAG1Q86YV5 1406 aa25.07■■□□□ 1.6
RPL39-202ENST00000468844 KDM4FA0A1W2PPD8 638 aa25.07■■□□□ 1.6
RPL39-202ENST00000468844 STAG3Q9UJ98 1225 aa25.06■■□□□ 1.6
RPL39-202ENST00000468844 RPGRIP1LQ68CZ1 1315 aa25.03■■□□□ 1.6
RPL39-202ENST00000468844 NRXN1Q9ULB1 1477 aa25.03■■□□□ 1.6
RPL39-202ENST00000468844 STAC3Q96MF2 364 aa25.02■■□□□ 1.6
RPL39-202ENST00000468844 KIAA1210Q9ULL0 1709 aa25.02■■□□□ 1.6
RPL39-202ENST00000468844 RALGAPBQ86X10 1494 aa25■■□□□ 1.59
RPL39-202ENST00000468844 ZFYVE9O95405 1425 aa24.99■■□□□ 1.59
RPL39-202ENST00000468844 ADGRF5Q8IZF2 1346 aa24.99■■□□□ 1.59
RPL39-202ENST00000468844 PIK3C2GO75747 1445 aa24.97■■□□□ 1.59
RPL39-202ENST00000468844 RIMS2Q9UQ26 1411 aa24.97■■□□□ 1.59
RPL39-202ENST00000468844 NUTM2DQ5VT03 806 aaPredicted RBP24.96■■□□□ 1.59
RPL39-202ENST00000468844 TMEM2Q9UHN6 1383 aa24.95■■□□□ 1.59
RPL39-202ENST00000468844 SLIT1O75093 1534 aa24.95■■□□□ 1.59
RPL39-202ENST00000468844 ARHGAP23Q9P227 1491 aa24.93■■□□□ 1.58
RPL39-202ENST00000468844 LAMC1P11047 1609 aa24.93■■□□□ 1.58
RPL39-202ENST00000468844 VGFO15240 615 aaPredicted RBP24.92■■□□□ 1.58
RPL39-202ENST00000468844 IQGAP1P46940 1657 aa24.91■■□□□ 1.58
RPL39-202ENST00000468844 NRXN3Q9Y4C0 1643 aa24.91■■□□□ 1.58
RPL39-202ENST00000468844 SETD1AO15047 1707 aaKnown RBP24.9■■□□□ 1.58
RPL39-202ENST00000468844 THEMISQ8N1K5 641 aaPredicted RBP24.89■■□□□ 1.58
RPL39-202ENST00000468844 ROCK2O75116 1388 aaKnown RBP24.88■■□□□ 1.57
RPL39-202ENST00000468844 NBPF1Q3BBV0 1214 aa24.88■■□□□ 1.57
RPL39-202ENST00000468844 GPRASP1Q5JY77 1395 aa24.87■■□□□ 1.57
RPL39-202ENST00000468844 POLR1AO95602 1720 aaPredicted RBP24.86■■□□□ 1.57
RPL39-202ENST00000468844 SETBP1Q9Y6X0 1596 aa24.86■■□□□ 1.57
RPL39-202ENST00000468844 CFAP70Q5T0N1 1121 aa24.85■■□□□ 1.57
RPL39-202ENST00000468844 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
RPL39-202ENST00000468844 LTKP29376 864 aa24.84■■□□□ 1.57
RPL39-202ENST00000468844 ADGRB1O14514 1584 aa24.84■■□□□ 1.57
RPL39-202ENST00000468844 ALKQ9UM73 1620 aa24.84■■□□□ 1.57
RPL39-202ENST00000468844 HDGFP51858 240 aaKnown RBP24.82■■□□□ 1.56
RPL39-202ENST00000468844 CARD11Q9BXL7 1154 aa24.82■■□□□ 1.56
RPL39-202ENST00000468844 SENP3Q9H4L4 574 aaPredicted RBP24.82■■□□□ 1.56
RPL39-202ENST00000468844 C14orf93Q9H972 538 aaKnown RBP24.82■■□□□ 1.56
RPL39-202ENST00000468844 ASXL1Q8IXJ9 1541 aa24.81■■□□□ 1.56
RPL39-202ENST00000468844 SCAF11Q99590 1463 aaKnown RBP24.81■■□□□ 1.56
RPL39-202ENST00000468844 TXNDC2Q86VQ3 553 aa24.8■■□□□ 1.56
RPL39-202ENST00000468844 EID1Q9Y6B2 187 aa24.78■■□□□ 1.56
RPL39-202ENST00000468844 USP47Q96K76 1375 aa24.78■■□□□ 1.56
RPL39-202ENST00000468844 PLEKHG1Q9ULL1 1385 aa24.78■■□□□ 1.56
RPL39-202ENST00000468844 LMTK3Q96Q04 1460 aa24.78■■□□□ 1.56
RPL39-202ENST00000468844 EIF4G2P78344 907 aaKnown RBP eCLIP24.76■■□□□ 1.55
RPL39-202ENST00000468844 ARHGEF28Q8N1W1 1705 aaKnown RBP24.75■■□□□ 1.55
RPL39-202ENST00000468844 HIRIP3Q9BW71 556 aaPredicted RBP24.74■■□□□ 1.55
RPL39-202ENST00000468844 ADAMTS13Q76LX8 1427 aa24.74■■□□□ 1.55
RPL39-202ENST00000468844 HSPA5P11021 654 aaKnown RBP24.74■■□□□ 1.55
RPL39-202ENST00000468844 TMEM132EQ6IEE7 984 aa24.73■■□□□ 1.55
RPL39-202ENST00000468844 ANKLE2Q86XL3 938 aa24.71■■□□□ 1.55
RPL39-202ENST00000468844 MED14O60244 1454 aa24.71■■□□□ 1.55
RPL39-202ENST00000468844 DIP2AQ14689 1571 aa24.71■■□□□ 1.55
RPL39-202ENST00000468844 ZNF316A6NFI3 1004 aaPredicted RBP24.71■■□□□ 1.55
RPL39-202ENST00000468844 BCANQ96GW7 911 aa24.68■■□□□ 1.54
RPL39-202ENST00000468844 KNDC1Q76NI1 1749 aa24.68■■□□□ 1.54
RPL39-202ENST00000468844 STRCQ7RTU9 1775 aa24.68■■□□□ 1.54
RPL39-202ENST00000468844 METP08581 1390 aa24.67■■□□□ 1.54
RPL39-202ENST00000468844 YTHDC2Q9H6S0 1430 aaKnown RBP24.66■■□□□ 1.54
RPL39-202ENST00000468844 HSPA2P54652 639 aa24.65■■□□□ 1.54
RPL39-202ENST00000468844 QRICH2Q9H0J4 1663 aa24.65■■□□□ 1.54
RPL39-202ENST00000468844 ST20-MTHFSA0A0A6YYL1 179 aa24.65■■□□□ 1.54
RPL39-202ENST00000468844 SLC26A8Q96RN1 970 aa24.64■■□□□ 1.53
RPL39-202ENST00000468844 CHD2O14647 1828 aaKnown RBP24.64■■□□□ 1.53
RPL39-202ENST00000468844 NPHP4O75161 1426 aaPredicted RBP24.62■■□□□ 1.53
RPL39-202ENST00000468844 EIF3AQ14152 1382 aaKnown RBP24.62■■□□□ 1.53
RPL39-202ENST00000468844 NCKAP5LQ9HCH0 1330 aa24.62■■□□□ 1.53
RPL39-202ENST00000468844 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
RPL39-202ENST00000468844 TBX22Q9Y458 520 aa24.59■■□□□ 1.53
RPL39-202ENST00000468844 XRN1Q8IZH2 1706 aaKnown RBP24.59■■□□□ 1.53
RPL39-202ENST00000468844 LRPPRCP42704 1394 aaKnown RBP24.59■■□□□ 1.53
RPL39-202ENST00000468844 CPS1P31327 1500 aa24.58■■□□□ 1.53
RPL39-202ENST00000468844 DLC1Q96QB1 1528 aa24.58■■□□□ 1.53
RPL39-202ENST00000468844 STK26Q9P289 416 aa24.58■■□□□ 1.53
RPL39-202ENST00000468844 TESK2Q96S53 571 aa24.57■■□□□ 1.52
RPL39-202ENST00000468844 TECPR2O15040 1411 aa24.56■■□□□ 1.52
RPL39-202ENST00000468844 PTPRUQ92729 1446 aa24.56■■□□□ 1.52
RPL39-202ENST00000468844 ABCC11Q96J66 1382 aa24.55■■□□□ 1.52
RPL39-202ENST00000468844 C11orf95C9JLR9 678 aaPredicted RBP24.53■■□□□ 1.52
RPL39-202ENST00000468844 CENPJQ9HC77 1338 aaPredicted RBP24.53■■□□□ 1.52
RPL39-202ENST00000468844 PIK3R4Q99570 1358 aa24.53■■□□□ 1.52
RPL39-202ENST00000468844 SBNO2Q9Y2G9 1366 aa24.51■■□□□ 1.51
RPL39-202ENST00000468844 WASHC2AQ641Q2 1341 aa24.5■■□□□ 1.51
RPL39-202ENST00000468844 DISP3Q9P2K9 1392 aa24.48■■□□□ 1.51
RPL39-202ENST00000468844 PRAM1Q96QH2 718 aa24.48■■□□□ 1.51
RPL39-202ENST00000468844 STRCP1A6NGW2 1772 aa24.48■■□□□ 1.51
RPL39-202ENST00000468844 NWD1Q149M9 1564 aa24.48■■□□□ 1.51
RPL39-202ENST00000468844 PTCH1Q13635 1447 aa24.47■■□□□ 1.51
RPL39-202ENST00000468844 FAM135BQ49AJ0 1406 aa24.47■■□□□ 1.51
RPL39-202ENST00000468844 ROBO2Q9HCK4 1378 aa24.47■■□□□ 1.51
RPL39-202ENST00000468844 PLEKHH1Q9ULM0 1364 aa24.47■■□□□ 1.51
RPL39-202ENST00000468844 KIF7Q2M1P5 1343 aa24.47■■□□□ 1.51
RPL39-202ENST00000468844 AMOTL2Q9Y2J4 779 aa24.47■■□□□ 1.51
RPL39-202ENST00000468844 CCDC7Q96M83 1385 aa24.46■■□□□ 1.51
RPL39-202ENST00000468844 SAFB2Q14151 953 aaKnown RBP eCLIP24.45■■□□□ 1.51
RPL39-202ENST00000468844 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.45■■□□□ 1.51
RPL39-202ENST00000468844 WAPLQ7Z5K2 1190 aa24.45■■□□□ 1.5
RPL39-202ENST00000468844 TULP4Q9NRJ4 1543 aa24.44■■□□□ 1.5
RPL39-202ENST00000468844 POGKQ9P215 609 aa24.43■■□□□ 1.5
RPL39-202ENST00000468844 TMF1P82094 1093 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms