RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 STAG3Q9UJ98 1225 aa27.98■■■□□ 2.07
COPS6-206ENST00000468499 COL16A1Q07092 1604 aaPredicted RBP27.97■■■□□ 2.07
COPS6-206ENST00000468499 GCC2Q8IWJ2 1684 aa27.97■■■□□ 2.07
COPS6-206ENST00000468499 CHIC2Q9UKJ5 165 aa27.96■■■□□ 2.07
COPS6-206ENST00000468499 ANKRD30AQ9BXX3 1397 aa27.94■■■□□ 2.06
COPS6-206ENST00000468499 ADGRL2O95490 1459 aa27.94■■■□□ 2.06
COPS6-206ENST00000468499 TMEM131LA2VDJ0 1609 aa27.92■■■□□ 2.06
COPS6-206ENST00000468499 LRP6O75581 1613 aa27.91■■■□□ 2.06
COPS6-206ENST00000468499 MSH6P52701 1360 aa27.89■■■□□ 2.06
COPS6-206ENST00000468499 PLEKHG1Q9ULL1 1385 aa27.88■■■□□ 2.05
COPS6-206ENST00000468499 RPRD2Q5VT52 1461 aaKnown RBP27.88■■■□□ 2.05
COPS6-206ENST00000468499 SLAIN2Q9P270 581 aa27.87■■■□□ 2.05
COPS6-206ENST00000468499 SLC52A1Q9NWF4 448 aa27.86■■■□□ 2.05
COPS6-206ENST00000468499 JCADQ9P266 1359 aa27.86■■■□□ 2.05
COPS6-206ENST00000468499 RIMS2Q9UQ26 1411 aa27.85■■■□□ 2.05
COPS6-206ENST00000468499 ADAMTS13Q76LX8 1427 aa27.83■■■□□ 2.05
COPS6-206ENST00000468499 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.82■■■□□ 2.04
COPS6-206ENST00000468499 UNC13BO14795 1591 aa27.81■■■□□ 2.04
COPS6-206ENST00000468499 ANKRD50Q9ULJ7 1429 aa27.8■■■□□ 2.04
COPS6-206ENST00000468499 AHDC1Q5TGY3 1603 aaPredicted RBP27.8■■■□□ 2.04
COPS6-206ENST00000468499 E9PCH4 1651 aa27.8■■■□□ 2.04
COPS6-206ENST00000468499 SHPRHQ149N8 1683 aa27.78■■■□□ 2.04
COPS6-206ENST00000468499 BCANQ96GW7 911 aa27.76■■■□□ 2.03
COPS6-206ENST00000468499 DIP2AQ14689 1571 aa27.76■■■□□ 2.03
COPS6-206ENST00000468499 NCOA3Q9Y6Q9 1424 aa27.75■■■□□ 2.03
COPS6-206ENST00000468499 TBX22Q9Y458 520 aa27.73■■■□□ 2.03
COPS6-206ENST00000468499 PTPRUQ92729 1446 aa27.71■■■□□ 2.03
COPS6-206ENST00000468499 NUTM2DQ5VT03 806 aaPredicted RBP27.7■■■□□ 2.02
COPS6-206ENST00000468499 NRXN3Q9Y4C0 1643 aa27.7■■■□□ 2.02
COPS6-206ENST00000468499 PPP1R15AO75807 674 aaPredicted RBP27.69■■■□□ 2.02
COPS6-206ENST00000468499 SPATA31A6Q5VVP1 1343 aa27.68■■■□□ 2.02
COPS6-206ENST00000468499 IQGAP3Q86VI3 1631 aa27.68■■■□□ 2.02
COPS6-206ENST00000468499 APLP2Q06481 763 aa27.67■■■□□ 2.02
COPS6-206ENST00000468499 XRN1Q8IZH2 1706 aaKnown RBP27.66■■■□□ 2.02
COPS6-206ENST00000468499 UPF1Q92900 1129 aaKnown RBP eCLIP27.65■■■□□ 2.02
COPS6-206ENST00000468499 PIK3R4Q99570 1358 aa27.63■■■□□ 2.01
COPS6-206ENST00000468499 TRPM2O94759 1503 aa27.63■■■□□ 2.01
COPS6-206ENST00000468499 FAM50AQ14320 339 aaKnown RBP27.63■■■□□ 2.01
COPS6-206ENST00000468499 C19orf44Q9H6X5 657 aa27.62■■■□□ 2.01
COPS6-206ENST00000468499 NHSL1Q5SYE7 1610 aa27.62■■■□□ 2.01
COPS6-206ENST00000468499 BRINP3Q76B58 766 aa27.6■■■□□ 2.01
COPS6-206ENST00000468499 CADPS2Q86UW7 1296 aa27.6■■■□□ 2.01
COPS6-206ENST00000468499 TRIM52Q96A61 297 aa27.6■■■□□ 2.01
COPS6-206ENST00000468499 ASXL1Q8IXJ9 1541 aa27.6■■■□□ 2.01
COPS6-206ENST00000468499 CHGAP10645 457 aaKnown RBP27.59■■■□□ 2.01
COPS6-206ENST00000468499 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.59■■■□□ 2.01
COPS6-206ENST00000468499 HDGFP51858 240 aaKnown RBP27.58■■■□□ 2.01
COPS6-206ENST00000468499 C14orf37Q86TY3 774 aa27.58■■■□□ 2.01
COPS6-206ENST00000468499 ZNF772Q68DY9 489 aaPredicted RBP27.57■■■□□ 2
COPS6-206ENST00000468499 MEX3CQ5U5Q3 659 aaKnown RBP27.56■■■□□ 2
COPS6-206ENST00000468499 AMOTL2Q9Y2J4 779 aa27.56■■■□□ 2
COPS6-206ENST00000468499 MST1RQ04912 1400 aa27.56■■■□□ 2
COPS6-206ENST00000468499 SETBP1Q9Y6X0 1596 aa27.56■■■□□ 2
COPS6-206ENST00000468499 DCCP43146 1447 aa27.55■■■□□ 2
COPS6-206ENST00000468499 ATF3P18847 181 aa27.54■■■□□ 2
COPS6-206ENST00000468499 CDK12Q9NYV4 1490 aaPredicted RBP27.53■■■□□ 2
COPS6-206ENST00000468499 SETD5Q9C0A6 1442 aa27.53■■■□□ 2
COPS6-206ENST00000468499 NALCNQ8IZF0 1738 aa27.51■■□□□ 1.99
COPS6-206ENST00000468499 SPHKAPQ2M3C7 1700 aa27.5■■□□□ 1.99
COPS6-206ENST00000468499 ROCK1Q13464 1354 aa27.5■■□□□ 1.99
COPS6-206ENST00000468499 NUTM2BA6NNL0 878 aaPredicted RBP27.48■■□□□ 1.99
COPS6-206ENST00000468499 NUTM2EB1AL46 878 aaPredicted RBP27.48■■□□□ 1.99
COPS6-206ENST00000468499 NUTM2AQ8IVF1 878 aaPredicted RBP27.48■■□□□ 1.99
COPS6-206ENST00000468499 METP08581 1390 aa27.48■■□□□ 1.99
COPS6-206ENST00000468499 RXRBP28702 533 aa27.47■■□□□ 1.99
COPS6-206ENST00000468499 RGS12O14924 1447 aa27.47■■□□□ 1.99
COPS6-206ENST00000468499 AFF2P51816 1311 aa27.46■■□□□ 1.99
COPS6-206ENST00000468499 DDX17Q92841 729 aaKnown RBP27.45■■□□□ 1.98
COPS6-206ENST00000468499 NUP155O75694 1391 aa27.45■■□□□ 1.98
COPS6-206ENST00000468499 NEXMIFQ5QGS0 1516 aa27.42■■□□□ 1.98
COPS6-206ENST00000468499 PNPLA6Q8IY17 1366 aa27.42■■□□□ 1.98
COPS6-206ENST00000468499 ADGRL3Q9HAR2 1447 aa27.41■■□□□ 1.98
COPS6-206ENST00000468499 SRCAPQ6ZRS2 3230 aa27.41■■□□□ 1.98
COPS6-206ENST00000468499 LAMC1P11047 1609 aa27.41■■□□□ 1.98
COPS6-206ENST00000468499 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
COPS6-206ENST00000468499 C8orf37Q96NL8 207 aa27.33■■□□□ 1.97
COPS6-206ENST00000468499 C1orf167Q5SNV9 1468 aa27.32■■□□□ 1.96
COPS6-206ENST00000468499 LRRC59Q96AG4 307 aaKnown RBP27.32■■□□□ 1.96
COPS6-206ENST00000468499 QTRT2Q9H974 415 aaKnown RBP27.29■■□□□ 1.96
COPS6-206ENST00000468499 RBM6P78332 1123 aaKnown RBP27.28■■□□□ 1.96
COPS6-206ENST00000468499 ITGAEP38570 1179 aa27.26■■□□□ 1.95
COPS6-206ENST00000468499 ZNF326Q5BKZ1 582 aaKnown RBP27.26■■□□□ 1.95
COPS6-206ENST00000468499 EP400Q96L91 3159 aa27.26■■□□□ 1.95
COPS6-206ENST00000468499 PTCH1Q13635 1447 aa27.25■■□□□ 1.95
COPS6-206ENST00000468499 KIF1BO60333 1816 aa27.25■■□□□ 1.95
COPS6-206ENST00000468499 ROBO2Q9HCK4 1378 aa27.25■■□□□ 1.95
COPS6-206ENST00000468499 COL22A1Q8NFW1 1626 aaPredicted RBP27.24■■□□□ 1.95
COPS6-206ENST00000468499 SOS2Q07890 1332 aaPredicted RBP27.23■■□□□ 1.95
COPS6-206ENST00000468499 PRAG1Q86YV5 1406 aa27.23■■□□□ 1.95
COPS6-206ENST00000468499 ADAMTS2O95450 1211 aa27.22■■□□□ 1.95
COPS6-206ENST00000468499 ORAI2Q96SN7 254 aa27.22■■□□□ 1.95
COPS6-206ENST00000468499 ATRNO75882 1429 aa27.16■■□□□ 1.94
COPS6-206ENST00000468499 NGLY1Q96IV0 654 aa27.16■■□□□ 1.94
COPS6-206ENST00000468499 PPLO60437 1756 aa27.16■■□□□ 1.94
COPS6-206ENST00000468499 MYOM2P54296 1465 aa27.15■■□□□ 1.94
COPS6-206ENST00000468499 MARF1Q9Y4F3 1742 aaKnown RBP27.15■■□□□ 1.94
COPS6-206ENST00000468499 FNBP4Q8N3X1 1017 aaPredicted RBP27.13■■□□□ 1.93
COPS6-206ENST00000468499 ATAD2Q6PL18 1390 aa27.12■■□□□ 1.93
COPS6-206ENST00000468499 USP21Q9UK80 565 aa27.12■■□□□ 1.93
COPS6-206ENST00000468499 PXDNQ92626 1479 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms