RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 TRIM52Q96A61 297 aa5.42□□□□□ -1.54
COMMD3-207ENST00000468469 KDM5AP29375 1690 aaKnown RBP5.42□□□□□ -1.54
COMMD3-207ENST00000468469 UBR1Q8IWV7 1749 aa5.42□□□□□ -1.54
COMMD3-207ENST00000468469 KCNA4P22459 653 aa5.41□□□□□ -1.54
COMMD3-207ENST00000468469 POLR1AO95602 1720 aaPredicted RBP5.4□□□□□ -1.54
COMMD3-207ENST00000468469 NEURL4Q96JN8 1562 aa5.4□□□□□ -1.55
COMMD3-207ENST00000468469 ACIN1Q9UKV3 1341 aaKnown RBP5.4□□□□□ -1.55
COMMD3-207ENST00000468469 CLTCL1P53675 1640 aa5.4□□□□□ -1.55
COMMD3-207ENST00000468469 PTPRTO14522 1441 aa5.4□□□□□ -1.55
COMMD3-207ENST00000468469 STRCQ7RTU9 1775 aa5.39□□□□□ -1.55
COMMD3-207ENST00000468469 ARHGAP23Q9P227 1491 aa5.39□□□□□ -1.55
COMMD3-207ENST00000468469 SLIT1O75093 1534 aa5.39□□□□□ -1.55
COMMD3-207ENST00000468469 TMEM131LA2VDJ0 1609 aa5.39□□□□□ -1.55
COMMD3-207ENST00000468469 SLC4A1APQ9BWU0 796 aaKnown RBP5.39□□□□□ -1.55
COMMD3-207ENST00000468469 IQGAP1P46940 1657 aa5.39□□□□□ -1.55
COMMD3-207ENST00000468469 SCAF11Q99590 1463 aaKnown RBP5.39□□□□□ -1.55
COMMD3-207ENST00000468469 MYCNP04198 464 aaPredicted RBP5.38□□□□□ -1.55
COMMD3-207ENST00000468469 PKD2Q13563 968 aa5.38□□□□□ -1.55
COMMD3-207ENST00000468469 SLC52A1Q9NWF4 448 aa5.38□□□□□ -1.55
COMMD3-207ENST00000468469 STAG3Q9UJ98 1225 aa5.38□□□□□ -1.55
COMMD3-207ENST00000468469 TMEM2Q9UHN6 1383 aa5.38□□□□□ -1.55
COMMD3-207ENST00000468469 TRIM26Q12899 539 aaPredicted RBP5.37□□□□□ -1.55
COMMD3-207ENST00000468469 IDI1Q13907 227 aa5.37□□□□□ -1.55
COMMD3-207ENST00000468469 LHX8Q68G74 356 aa5.37□□□□□ -1.55
COMMD3-207ENST00000468469 THEMISQ8N1K5 641 aaPredicted RBP5.37□□□□□ -1.55
COMMD3-207ENST00000468469 ZBTB12Q9Y330 459 aaPredicted RBP5.37□□□□□ -1.55
COMMD3-207ENST00000468469 NCKAP5LQ9HCH0 1330 aa5.37□□□□□ -1.55
COMMD3-207ENST00000468469 CCDC144AA2RUR9 1427 aa5.37□□□□□ -1.55
COMMD3-207ENST00000468469 NPHP4O75161 1426 aaPredicted RBP5.37□□□□□ -1.55
COMMD3-207ENST00000468469 MED14O60244 1454 aa5.37□□□□□ -1.55
COMMD3-207ENST00000468469 SETD1BQ9UPS6 1966 aaKnown RBP5.36□□□□□ -1.55
COMMD3-207ENST00000468469 CHGAP10645 457 aaKnown RBP5.36□□□□□ -1.55
COMMD3-207ENST00000468469 MPHOSPH9Q99550 1183 aa5.36□□□□□ -1.55
COMMD3-207ENST00000468469 ZFYVE9O95405 1425 aa5.36□□□□□ -1.55
COMMD3-207ENST00000468469 RIMS2Q9UQ26 1411 aa5.36□□□□□ -1.55
COMMD3-207ENST00000468469 NEXMIFQ5QGS0 1516 aa5.36□□□□□ -1.55
COMMD3-207ENST00000468469 MYO5BQ9ULV0 1848 aa5.35□□□□□ -1.55
COMMD3-207ENST00000468469 PPP1R15AO75807 674 aaPredicted RBP5.35□□□□□ -1.55
COMMD3-207ENST00000468469 HRCP23327 699 aa5.35□□□□□ -1.55
COMMD3-207ENST00000468469 ANKLE2Q86XL3 938 aa5.35□□□□□ -1.55
COMMD3-207ENST00000468469 EID1Q9Y6B2 187 aa5.35□□□□□ -1.55
COMMD3-207ENST00000468469 CFAP65Q6ZU64 1925 aaKnown RBP5.35□□□□□ -1.55
COMMD3-207ENST00000468469 KIF1BO60333 1816 aa5.34□□□□□ -1.55
COMMD3-207ENST00000468469 DIP2AQ14689 1571 aa5.34□□□□□ -1.55
COMMD3-207ENST00000468469 PLEKHG1Q9ULL1 1385 aa5.34□□□□□ -1.55
COMMD3-207ENST00000468469 PLSCR2Q9NRY7 297 aa5.34□□□□□ -1.55
COMMD3-207ENST00000468469 SETBP1Q9Y6X0 1596 aa5.33□□□□□ -1.56
COMMD3-207ENST00000468469 LTKP29376 864 aa5.33□□□□□ -1.56
COMMD3-207ENST00000468469 ZNF326Q5BKZ1 582 aaKnown RBP5.33□□□□□ -1.56
COMMD3-207ENST00000468469 TXNDC2Q86VQ3 553 aa5.33□□□□□ -1.56
COMMD3-207ENST00000468469 IFT172Q9UG01 1749 aa5.33□□□□□ -1.56
COMMD3-207ENST00000468469 LTBP4Q8N2S1 1624 aa5.33□□□□□ -1.56
COMMD3-207ENST00000468469 NRXN3Q9Y4C0 1643 aa5.33□□□□□ -1.56
COMMD3-207ENST00000468469 NWD1Q149M9 1564 aa5.33□□□□□ -1.56
COMMD3-207ENST00000468469 CPS1P31327 1500 aa5.33□□□□□ -1.56
COMMD3-207ENST00000468469 SPATA31E1Q6ZUB1 1445 aa5.32□□□□□ -1.56
COMMD3-207ENST00000468469 PPLO60437 1756 aa5.32□□□□□ -1.56
COMMD3-207ENST00000468469 ANKRD30BQ9BXX2 1392 aa5.32□□□□□ -1.56
COMMD3-207ENST00000468469 ZNF335Q9H4Z2 1342 aaPredicted RBP5.32□□□□□ -1.56
COMMD3-207ENST00000468469 HDGFP51858 240 aaKnown RBP5.32□□□□□ -1.56
COMMD3-207ENST00000468469 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.32□□□□□ -1.56
COMMD3-207ENST00000468469 ATF5Q9Y2D1 282 aaPredicted RBP5.32□□□□□ -1.56
COMMD3-207ENST00000468469 MYOM2P54296 1465 aa5.32□□□□□ -1.56
COMMD3-207ENST00000468469 ADAMTS13Q76LX8 1427 aa5.31□□□□□ -1.56
COMMD3-207ENST00000468469 DHX57Q6P158 1386 aaKnown RBP5.31□□□□□ -1.56
COMMD3-207ENST00000468469 NUTM2DQ5VT03 806 aaPredicted RBP5.31□□□□□ -1.56
COMMD3-207ENST00000468469 BCANQ96GW7 911 aa5.31□□□□□ -1.56
COMMD3-207ENST00000468469 NKTRP30414 1462 aaKnown RBP5.31□□□□□ -1.56
COMMD3-207ENST00000468469 IQSEC2Q5JU85 1478 aa5.31□□□□□ -1.56
COMMD3-207ENST00000468469 LAMC1P11047 1609 aa5.3□□□□□ -1.56
COMMD3-207ENST00000468469 RPGRIP1LQ68CZ1 1315 aa5.3□□□□□ -1.56
COMMD3-207ENST00000468469 GABBR2O75899 941 aa5.3□□□□□ -1.56
COMMD3-207ENST00000468469 SLC26A8Q96RN1 970 aa5.3□□□□□ -1.56
COMMD3-207ENST00000468469 PIK3C2GO75747 1445 aa5.3□□□□□ -1.56
COMMD3-207ENST00000468469 STRCP1A6NGW2 1772 aa5.29□□□□□ -1.56
COMMD3-207ENST00000468469 SETD1AO15047 1707 aaKnown RBP5.29□□□□□ -1.56
COMMD3-207ENST00000468469 XRN1Q8IZH2 1706 aaKnown RBP5.29□□□□□ -1.56
COMMD3-207ENST00000468469 NRXN1Q9ULB1 1477 aa5.29□□□□□ -1.56
COMMD3-207ENST00000468469 C19orf67A6NJJ6 358 aa5.29□□□□□ -1.56
COMMD3-207ENST00000468469 PCGF6Q9BYE7 350 aa5.29□□□□□ -1.56
COMMD3-207ENST00000468469 ALKQ9UM73 1620 aa5.29□□□□□ -1.56
COMMD3-207ENST00000468469 PIK3R4Q99570 1358 aa5.29□□□□□ -1.56
COMMD3-207ENST00000468469 ASXL1Q8IXJ9 1541 aa5.28□□□□□ -1.56
COMMD3-207ENST00000468469 LRRC7Q96NW7 1537 aa5.28□□□□□ -1.56
COMMD3-207ENST00000468469 VGFO15240 615 aaPredicted RBP5.28□□□□□ -1.56
COMMD3-207ENST00000468469 PRKAR2AP13861 404 aaKnown RBP5.28□□□□□ -1.56
COMMD3-207ENST00000468469 RGL3Q3MIN7 710 aa5.28□□□□□ -1.56
COMMD3-207ENST00000468469 CERKQ8TCT0 537 aa5.28□□□□□ -1.56
COMMD3-207ENST00000468469 ADGRF5Q8IZF2 1346 aa5.27□□□□□ -1.57
COMMD3-207ENST00000468469 PTCH1Q13635 1447 aa5.27□□□□□ -1.57
COMMD3-207ENST00000468469 PRAG1Q86YV5 1406 aa5.27□□□□□ -1.57
COMMD3-207ENST00000468469 PTPRUQ92729 1446 aa5.27□□□□□ -1.57
COMMD3-207ENST00000468469 TBX22Q9Y458 520 aa5.27□□□□□ -1.57
COMMD3-207ENST00000468469 METP08581 1390 aa5.27□□□□□ -1.57
COMMD3-207ENST00000468469 KNDC1Q76NI1 1749 aa5.26□□□□□ -1.57
COMMD3-207ENST00000468469 CHD2O14647 1828 aaKnown RBP5.26□□□□□ -1.57
COMMD3-207ENST00000468469 KCNA6P17658 529 aa5.26□□□□□ -1.57
COMMD3-207ENST00000468469 TMEM94Q12767 1356 aa5.26□□□□□ -1.57
COMMD3-207ENST00000468469 ADGRB1O14514 1584 aa5.25□□□□□ -1.57
COMMD3-207ENST00000468469 TECPR2O15040 1411 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms