RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 BEGAINQ9BUH8 593 aa6.54□□□□□ -1.36
HMGB1P25-201ENST00000468402 A0A0G2JS52 829 aa6.53□□□□□ -1.36
HMGB1P25-201ENST00000468402 MCM6Q14566 821 aa6.53□□□□□ -1.36
HMGB1P25-201ENST00000468402 CCDC97Q96F63 343 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P25-201ENST00000468402 CDHR5Q9HBB8 845 aa6.53□□□□□ -1.36
HMGB1P25-201ENST00000468402 PROSER2Q86WR7 435 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P25-201ENST00000468402 PROCA1Q8NCQ7 364 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P25-201ENST00000468402 ANKK1Q8NFD2 765 aa6.52□□□□□ -1.37
HMGB1P25-201ENST00000468402 EPAS1Q99814 870 aa6.52□□□□□ -1.37
HMGB1P25-201ENST00000468402 EN1Q05925 392 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P25-201ENST00000468402 PHF14O94880 888 aa6.5□□□□□ -1.37
HMGB1P25-201ENST00000468402 FAM161AQ3B820 660 aa6.5□□□□□ -1.37
HMGB1P25-201ENST00000468402 OATP04181 439 aa6.49□□□□□ -1.37
HMGB1P25-201ENST00000468402 NLRP7Q8WX94 980 aa6.49□□□□□ -1.37
HMGB1P25-201ENST00000468402 NPDC1Q9NQX5 325 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P25-201ENST00000468402 CCDC9Q9Y3X0 531 aaKnown RBP6.49□□□□□ -1.37
HMGB1P25-201ENST00000468402 TSR1Q2NL82 804 aaKnown RBP6.48□□□□□ -1.37
HMGB1P25-201ENST00000468402 POM121Q96HA1 1249 aa6.48□□□□□ -1.37
HMGB1P25-201ENST00000468402 PHOX2BQ99453 314 aa6.48□□□□□ -1.37
HMGB1P25-201ENST00000468402 BCL2L12Q9HB09 334 aa6.48□□□□□ -1.37
HMGB1P25-201ENST00000468402 ANO8Q9HCE9 1232 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P25-201ENST00000468402 SERPINA10Q9UK55 444 aa6.48□□□□□ -1.37
HMGB1P25-201ENST00000468402 TYW1BQ6NUM6 668 aa6.47□□□□□ -1.37
HMGB1P25-201ENST00000468402 TMUB1Q9BVT8 246 aa6.47□□□□□ -1.37
HMGB1P25-201ENST00000468402 FAM217BQ9NTX9 383 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P25-201ENST00000468402 ZDHHC16Q969W1 377 aa6.46□□□□□ -1.38
HMGB1P25-201ENST00000468402 ZNF330Q9Y3S2 320 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P25-201ENST00000468402 PCDHGA10Q9Y5H3 936 aa6.46□□□□□ -1.38
HMGB1P25-201ENST00000468402 CLK2P49760 499 aaKnown RBP6.45□□□□□ -1.38
HMGB1P25-201ENST00000468402 MYSM1Q5VVJ2 828 aa6.45□□□□□ -1.38
HMGB1P25-201ENST00000468402 METTL3Q86U44 580 aaKnown RBP6.45□□□□□ -1.38
HMGB1P25-201ENST00000468402 FBXW7Q969H0 707 aa6.45□□□□□ -1.38
HMGB1P25-201ENST00000468402 SPDYE5A6NIY4 337 aa6.44□□□□□ -1.38
HMGB1P25-201ENST00000468402 BCAMP50895 628 aa6.44□□□□□ -1.38
HMGB1P25-201ENST00000468402 DIXDC1Q155Q3 683 aa6.44□□□□□ -1.38
HMGB1P25-201ENST00000468402 PADI6Q6TGC4 694 aa6.44□□□□□ -1.38
HMGB1P25-201ENST00000468402 AEBP1Q8IUX7 1158 aa6.44□□□□□ -1.38
HMGB1P25-201ENST00000468402 WWC1Q8IX03 1113 aa6.44□□□□□ -1.38
HMGB1P25-201ENST00000468402 ZBED2Q9BTP6 218 aa6.44□□□□□ -1.38
HMGB1P25-201ENST00000468402 TBC1D2Q9BYX2 928 aa6.44□□□□□ -1.38
HMGB1P25-201ENST00000468402 KCNC4Q03721 635 aa6.43□□□□□ -1.38
HMGB1P25-201ENST00000468402 IFFO2Q5TF58 517 aa6.43□□□□□ -1.38
HMGB1P25-201ENST00000468402 CERKQ8TCT0 537 aa6.43□□□□□ -1.38
HMGB1P25-201ENST00000468402 NECTIN2Q92692 538 aa6.43□□□□□ -1.38
HMGB1P25-201ENST00000468402 SLC4A5Q9BY07 1137 aa6.43□□□□□ -1.38
HMGB1P25-201ENST00000468402 SNRKQ9NRH2 765 aa6.43□□□□□ -1.38
HMGB1P25-201ENST00000468402 COG6Q9Y2V7 657 aa6.43□□□□□ -1.38
HMGB1P25-201ENST00000468402 KDM4FA0A1W2PPD8 638 aa6.42□□□□□ -1.38
HMGB1P25-201ENST00000468402 RFC5P40937 340 aa6.42□□□□□ -1.38
HMGB1P25-201ENST00000468402 FOSBP53539 338 aa6.42□□□□□ -1.38
HMGB1P25-201ENST00000468402 TMEM259Q4ZIN3 620 aa6.42□□□□□ -1.38
HMGB1P25-201ENST00000468402 FNBP4Q8N3X1 1017 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P25-201ENST00000468402 JPH4Q96JJ6 628 aa6.42□□□□□ -1.38
HMGB1P25-201ENST00000468402 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P25-201ENST00000468402 PRM3Q9NNZ6 103 aa6.42□□□□□ -1.38
HMGB1P25-201ENST00000468402 GFRA3O60609 400 aa6.41□□□□□ -1.38
HMGB1P25-201ENST00000468402 CSPP1Q1MSJ5 1256 aa6.41□□□□□ -1.38
HMGB1P25-201ENST00000468402 C6orf132Q5T0Z8 1188 aa6.41□□□□□ -1.38
HMGB1P25-201ENST00000468402 BANK1Q8NDB2 785 aa6.41□□□□□ -1.38
HMGB1P25-201ENST00000468402 RBM46Q8TBY0 533 aaKnown RBP6.41□□□□□ -1.38
HMGB1P25-201ENST00000468402 PXYLP1Q8TE99 480 aa6.41□□□□□ -1.38
HMGB1P25-201ENST00000468402 ADAM33Q9BZ11 813 aa6.41□□□□□ -1.38
HMGB1P25-201ENST00000468402 ADGRG1Q9Y653 693 aa6.41□□□□□ -1.38
HMGB1P25-201ENST00000468402 LAPTM4AQ15012 233 aa6.4□□□□□ -1.38
HMGB1P25-201ENST00000468402 RIC3Q7Z5B4 369 aa6.4□□□□□ -1.38
HMGB1P25-201ENST00000468402 NUTM1Q86Y26 1132 aa6.4□□□□□ -1.38
HMGB1P25-201ENST00000468402 KCTD17Q8N5Z5 321 aa6.4□□□□□ -1.38
HMGB1P25-201ENST00000468402 BHMG1C9JSJ3 638 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P25-201ENST00000468402 ABL2P42684 1182 aa6.39□□□□□ -1.39
HMGB1P25-201ENST00000468402 PROX2Q3B8N5 592 aa6.39□□□□□ -1.39
HMGB1P25-201ENST00000468402 CALR3Q96L12 384 aaKnown RBP6.39□□□□□ -1.39
HMGB1P25-201ENST00000468402 TRAIPQ9BWF2 469 aa6.39□□□□□ -1.39
HMGB1P25-201ENST00000468402 GDPD2Q9HCC8 539 aa6.39□□□□□ -1.39
HMGB1P25-201ENST00000468402 RABGEF1Q9UJ41 708 aa6.39□□□□□ -1.39
HMGB1P25-201ENST00000468402 ACIN1Q9UKV3 1341 aaKnown RBP6.39□□□□□ -1.39
HMGB1P25-201ENST00000468402 PPP1R3GB7ZBB8 358 aa6.38□□□□□ -1.39
HMGB1P25-201ENST00000468402 LIMD1Q9UGP4 676 aa6.38□□□□□ -1.39
HMGB1P25-201ENST00000468402 SEPT9Q9UHD8 586 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P25-201ENST00000468402 NUTM2BA6NNL0 878 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P25-201ENST00000468402 NUTM2EB1AL46 878 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P25-201ENST00000468402 RNF40O75150 1001 aa6.37□□□□□ -1.39
HMGB1P25-201ENST00000468402 NUTM2DQ5VT03 806 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P25-201ENST00000468402 TRAF7Q6Q0C0 670 aa6.37□□□□□ -1.39
HMGB1P25-201ENST00000468402 NYAP1Q6ZVC0 841 aa6.37□□□□□ -1.39
HMGB1P25-201ENST00000468402 NUTM2AQ8IVF1 878 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P25-201ENST00000468402 LRCH3Q96II8 777 aa6.37□□□□□ -1.39
HMGB1P25-201ENST00000468402 AP1G2O75843 785 aa6.36□□□□□ -1.39
HMGB1P25-201ENST00000468402 PRSS12P56730 875 aa6.36□□□□□ -1.39
HMGB1P25-201ENST00000468402 SPIRE2Q8WWL2 714 aa6.36□□□□□ -1.39
HMGB1P25-201ENST00000468402 CDCA7LQ96GN5 454 aa6.36□□□□□ -1.39
HMGB1P25-201ENST00000468402 ZFRQ96KR1 1074 aaKnown RBP6.36□□□□□ -1.39
HMGB1P25-201ENST00000468402 WBP1LQ9NX94 342 aa6.36□□□□□ -1.39
HMGB1P25-201ENST00000468402 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P25-201ENST00000468402 KIAA1468Q9P260 1216 aa6.36□□□□□ -1.39
HMGB1P25-201ENST00000468402 HPS5Q9UPZ3 1129 aa6.36□□□□□ -1.39
HMGB1P25-201ENST00000468402 SOWAHBA6NEL2 793 aa6.35□□□□□ -1.39
HMGB1P25-201ENST00000468402 DDX11L8A8MPP1 907 aa6.35□□□□□ -1.39
HMGB1P25-201ENST00000468402 SULF1Q8IWU6 871 aa6.35□□□□□ -1.39
HMGB1P25-201ENST00000468402 RETREG2Q8NC44 543 aa6.35□□□□□ -1.39
HMGB1P25-201ENST00000468402 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms