RNA–Protein interactions for RNA: ENST00000468200.2

C12orf40-203, Transcript of chromosome 12 open reading frame 40, humanhuman

TSL 1 (best)

Gene C12orf40, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40-203ENST00000468200 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
C12orf40-203ENST00000468200 CPS1P31327 1500 aa11.36□□□□□ -0.59
C12orf40-203ENST00000468200 HSPA2P54652 639 aa11.36□□□□□ -0.59
C12orf40-203ENST00000468200 DCAF11Q8TEB1 546 aa11.35□□□□□ -0.59
C12orf40-203ENST00000468200 UBR1Q8IWV7 1749 aa11.35□□□□□ -0.59
C12orf40-203ENST00000468200 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
C12orf40-203ENST00000468200 TMEM2Q9UHN6 1383 aa11.32□□□□□ -0.6
C12orf40-203ENST00000468200 RIMS2Q9UQ26 1411 aa11.32□□□□□ -0.6
C12orf40-203ENST00000468200 MED14O60244 1454 aa11.32□□□□□ -0.6
C12orf40-203ENST00000468200 LTKP29376 864 aa11.32□□□□□ -0.6
C12orf40-203ENST00000468200 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
C12orf40-203ENST00000468200 ADGRF5Q8IZF2 1346 aa11.32□□□□□ -0.6
C12orf40-203ENST00000468200 NEXMIFQ5QGS0 1516 aa11.31□□□□□ -0.6
C12orf40-203ENST00000468200 ZFYVE9O95405 1425 aa11.3□□□□□ -0.6
C12orf40-203ENST00000468200 PPP1R15AO75807 674 aaPredicted RBP11.3□□□□□ -0.6
C12orf40-203ENST00000468200 TXNDC2Q86VQ3 553 aa11.3□□□□□ -0.6
C12orf40-203ENST00000468200 NEURL4Q96JN8 1562 aa11.3□□□□□ -0.6
C12orf40-203ENST00000468200 RPGRIP1LQ68CZ1 1315 aa11.29□□□□□ -0.6
C12orf40-203ENST00000468200 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
C12orf40-203ENST00000468200 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
C12orf40-203ENST00000468200 NBPF8Q3BBV2 869 aa11.29□□□□□ -0.6
C12orf40-203ENST00000468200 PPLO60437 1756 aa11.29□□□□□ -0.6
C12orf40-203ENST00000468200 SLIT1O75093 1534 aa11.28□□□□□ -0.6
C12orf40-203ENST00000468200 IFT172Q9UG01 1749 aa11.28□□□□□ -0.6
C12orf40-203ENST00000468200 EID1Q9Y6B2 187 aa11.28□□□□□ -0.6
C12orf40-203ENST00000468200 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.6
C12orf40-203ENST00000468200 BCANQ96GW7 911 aa11.27□□□□□ -0.6
C12orf40-203ENST00000468200 TIMELESSQ9UNS1 1208 aa11.27□□□□□ -0.6
C12orf40-203ENST00000468200 ANKLE2Q86XL3 938 aa11.27□□□□□ -0.61
C12orf40-203ENST00000468200 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.27□□□□□ -0.61
C12orf40-203ENST00000468200 SCAF11Q99590 1463 aaKnown RBP11.26□□□□□ -0.61
C12orf40-203ENST00000468200 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
C12orf40-203ENST00000468200 MYOM2P54296 1465 aa11.25□□□□□ -0.61
C12orf40-203ENST00000468200 HDGFP51858 240 aaKnown RBP11.25□□□□□ -0.61
C12orf40-203ENST00000468200 CERKQ8TCT0 537 aa11.25□□□□□ -0.61
C12orf40-203ENST00000468200 CFAP70Q5T0N1 1121 aa11.25□□□□□ -0.61
C12orf40-203ENST00000468200 SLC26A8Q96RN1 970 aa11.25□□□□□ -0.61
C12orf40-203ENST00000468200 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
C12orf40-203ENST00000468200 PIK3C2GO75747 1445 aa11.24□□□□□ -0.61
C12orf40-203ENST00000468200 NBPF1Q3BBV0 1214 aa11.24□□□□□ -0.61
C12orf40-203ENST00000468200 NRXN1Q9ULB1 1477 aa11.24□□□□□ -0.61
C12orf40-203ENST00000468200 ZEB1P37275 1124 aaPredicted RBP11.23□□□□□ -0.61
C12orf40-203ENST00000468200 PLEKHG1Q9ULL1 1385 aa11.23□□□□□ -0.61
C12orf40-203ENST00000468200 TMEM132EQ6IEE7 984 aa11.22□□□□□ -0.61
C12orf40-203ENST00000468200 STAC3Q96MF2 364 aa11.22□□□□□ -0.61
C12orf40-203ENST00000468200 NPHP4O75161 1426 aaPredicted RBP11.22□□□□□ -0.61
C12orf40-203ENST00000468200 NRXN3Q9Y4C0 1643 aa11.21□□□□□ -0.61
C12orf40-203ENST00000468200 IQGAP1P46940 1657 aa11.21□□□□□ -0.61
C12orf40-203ENST00000468200 ADAMTS13Q76LX8 1427 aa11.21□□□□□ -0.62
C12orf40-203ENST00000468200 C14orf93Q9H972 538 aaKnown RBP11.21□□□□□ -0.62
C12orf40-203ENST00000468200 NWD1Q149M9 1564 aa11.2□□□□□ -0.62
C12orf40-203ENST00000468200 METP08581 1390 aa11.2□□□□□ -0.62
C12orf40-203ENST00000468200 SETBP1Q9Y6X0 1596 aa11.19□□□□□ -0.62
C12orf40-203ENST00000468200 ROCK2O75116 1388 aaKnown RBP11.19□□□□□ -0.62
C12orf40-203ENST00000468200 TRPM1Q7Z4N2 1603 aa11.18□□□□□ -0.62
C12orf40-203ENST00000468200 STK26Q9P289 416 aa11.18□□□□□ -0.62
C12orf40-203ENST00000468200 ASXL1Q8IXJ9 1541 aa11.18□□□□□ -0.62
C12orf40-203ENST00000468200 XIRP1Q702N8 1843 aaKnown RBP11.18□□□□□ -0.62
C12orf40-203ENST00000468200 MED1Q15648 1581 aaPredicted RBP11.18□□□□□ -0.62
C12orf40-203ENST00000468200 RALGAPBQ86X10 1494 aa11.18□□□□□ -0.62
C12orf40-203ENST00000468200 CARD11Q9BXL7 1154 aa11.17□□□□□ -0.62
C12orf40-203ENST00000468200 SOCS7O14512 581 aa11.17□□□□□ -0.62
C12orf40-203ENST00000468200 TBX22Q9Y458 520 aa11.17□□□□□ -0.62
C12orf40-203ENST00000468200 SETD1AO15047 1707 aaKnown RBP11.16□□□□□ -0.62
C12orf40-203ENST00000468200 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
C12orf40-203ENST00000468200 TRAK1Q9UPV9 953 aa11.16□□□□□ -0.62
C12orf40-203ENST00000468200 PTPRUQ92729 1446 aa11.15□□□□□ -0.62
C12orf40-203ENST00000468200 HIRIP3Q9BW71 556 aaPredicted RBP11.15□□□□□ -0.63
C12orf40-203ENST00000468200 LAMC1P11047 1609 aa11.14□□□□□ -0.63
C12orf40-203ENST00000468200 KIAA1210Q9ULL0 1709 aa11.14□□□□□ -0.63
C12orf40-203ENST00000468200 GPRASP1Q5JY77 1395 aa11.14□□□□□ -0.63
C12orf40-203ENST00000468200 YTHDC2Q9H6S0 1430 aaKnown RBP11.14□□□□□ -0.63
C12orf40-203ENST00000468200 AMOTL2Q9Y2J4 779 aa11.14□□□□□ -0.63
C12orf40-203ENST00000468200 STRCP1A6NGW2 1772 aa11.13□□□□□ -0.63
C12orf40-203ENST00000468200 DIP2AQ14689 1571 aa11.13□□□□□ -0.63
C12orf40-203ENST00000468200 KCNA6P17658 529 aa11.12□□□□□ -0.63
C12orf40-203ENST00000468200 SAFB2Q14151 953 aaKnown RBP eCLIP11.12□□□□□ -0.63
C12orf40-203ENST00000468200 RBM33Q96EV2 1170 aaKnown RBP11.12□□□□□ -0.63
C12orf40-203ENST00000468200 ZNF335Q9H4Z2 1342 aaPredicted RBP11.12□□□□□ -0.63
C12orf40-203ENST00000468200 LRPPRCP42704 1394 aaKnown RBP11.12□□□□□ -0.63
C12orf40-203ENST00000468200 USP47Q96K76 1375 aa11.12□□□□□ -0.63
C12orf40-203ENST00000468200 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
C12orf40-203ENST00000468200 HSPA5P11021 654 aaKnown RBP11.1□□□□□ -0.63
C12orf40-203ENST00000468200 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
C12orf40-203ENST00000468200 PLEKHH1Q9ULM0 1364 aa11.1□□□□□ -0.63
C12orf40-203ENST00000468200 PRAM1Q96QH2 718 aa11.1□□□□□ -0.63
C12orf40-203ENST00000468200 ST20-MTHFSA0A0A6YYL1 179 aa11.1□□□□□ -0.63
C12orf40-203ENST00000468200 ABCC11Q96J66 1382 aa11.09□□□□□ -0.63
C12orf40-203ENST00000468200 PIK3R4Q99570 1358 aa11.09□□□□□ -0.63
C12orf40-203ENST00000468200 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
C12orf40-203ENST00000468200 CHD2O14647 1828 aaKnown RBP11.09□□□□□ -0.63
C12orf40-203ENST00000468200 POGKQ9P215 609 aa11.08□□□□□ -0.64
C12orf40-203ENST00000468200 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
C12orf40-203ENST00000468200 TECPR2O15040 1411 aa11.07□□□□□ -0.64
C12orf40-203ENST00000468200 ARHGEF28Q8N1W1 1705 aaKnown RBP11.07□□□□□ -0.64
C12orf40-203ENST00000468200 CENPJQ9HC77 1338 aaPredicted RBP11.06□□□□□ -0.64
C12orf40-203ENST00000468200 PROSER2Q86WR7 435 aaPredicted RBP11.06□□□□□ -0.64
C12orf40-203ENST00000468200 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
C12orf40-203ENST00000468200 EIF3AQ14152 1382 aaKnown RBP11.06□□□□□ -0.64
C12orf40-203ENST00000468200 PTCH1Q13635 1447 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms