RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.9■■□□□ 1.1
COMMD3-206ENST00000468179 E9PCH4 1651 aa21.9■■□□□ 1.1
COMMD3-206ENST00000468179 ACIN1Q9UKV3 1341 aaKnown RBP21.89■■□□□ 1.09
COMMD3-206ENST00000468179 UBAP1LF5GYI3 381 aa21.87■■□□□ 1.09
COMMD3-206ENST00000468179 PPP1R15AO75807 674 aaPredicted RBP21.87■■□□□ 1.09
COMMD3-206ENST00000468179 BCANQ96GW7 911 aa21.87■■□□□ 1.09
COMMD3-206ENST00000468179 RIMS2Q9UQ26 1411 aa21.83■■□□□ 1.09
COMMD3-206ENST00000468179 TOM1O60784 492 aa21.83■■□□□ 1.09
COMMD3-206ENST00000468179 SLC4A1APQ9BWU0 796 aaKnown RBP21.83■■□□□ 1.09
COMMD3-206ENST00000468179 TMEM131LA2VDJ0 1609 aa21.82■■□□□ 1.08
COMMD3-206ENST00000468179 ZFYVE9O95405 1425 aa21.81■■□□□ 1.08
COMMD3-206ENST00000468179 PLEKHG1Q9ULL1 1385 aa21.81■■□□□ 1.08
COMMD3-206ENST00000468179 SLC26A8Q96RN1 970 aa21.8■■□□□ 1.08
COMMD3-206ENST00000468179 KCNA6P17658 529 aa21.79■■□□□ 1.08
COMMD3-206ENST00000468179 ZNF326Q5BKZ1 582 aaKnown RBP21.77■■□□□ 1.07
COMMD3-206ENST00000468179 SPHKAPQ2M3C7 1700 aa21.76■■□□□ 1.07
COMMD3-206ENST00000468179 TBX22Q9Y458 520 aa21.76■■□□□ 1.07
COMMD3-206ENST00000468179 LRRC7Q96NW7 1537 aa21.75■■□□□ 1.07
COMMD3-206ENST00000468179 PPP4R3CPQ6ZMV5 832 aa21.75■■□□□ 1.07
COMMD3-206ENST00000468179 TRPM2O94759 1503 aa21.73■■□□□ 1.07
COMMD3-206ENST00000468179 SETD5Q9C0A6 1442 aa21.72■■□□□ 1.07
COMMD3-206ENST00000468179 NUTM2DQ5VT03 806 aaPredicted RBP21.72■■□□□ 1.07
COMMD3-206ENST00000468179 PROSER2Q86WR7 435 aaPredicted RBP21.71■■□□□ 1.07
COMMD3-206ENST00000468179 MPHOSPH9Q99550 1183 aa21.71■■□□□ 1.07
COMMD3-206ENST00000468179 MYO5BQ9ULV0 1848 aa21.7■■□□□ 1.06
COMMD3-206ENST00000468179 PIP4K2BP78356 416 aa21.7■■□□□ 1.06
COMMD3-206ENST00000468179 STRCP1A6NGW2 1772 aa21.69■■□□□ 1.06
COMMD3-206ENST00000468179 PIK3R4Q99570 1358 aa21.67■■□□□ 1.06
COMMD3-206ENST00000468179 NKTRP30414 1462 aaKnown RBP21.67■■□□□ 1.06
COMMD3-206ENST00000468179 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
COMMD3-206ENST00000468179 TMEM94Q12767 1356 aa21.66■■□□□ 1.06
COMMD3-206ENST00000468179 DIP2AQ14689 1571 aa21.66■■□□□ 1.06
COMMD3-206ENST00000468179 CLTCL1P53675 1640 aa21.65■■□□□ 1.06
COMMD3-206ENST00000468179 VGFO15240 615 aaPredicted RBP21.65■■□□□ 1.06
COMMD3-206ENST00000468179 ADAMTS13Q76LX8 1427 aa21.64■■□□□ 1.05
COMMD3-206ENST00000468179 NWD1Q149M9 1564 aa21.62■■□□□ 1.05
COMMD3-206ENST00000468179 CCDC144AA2RUR9 1427 aa21.62■■□□□ 1.05
COMMD3-206ENST00000468179 RAB3GAP2Q9H2M9 1393 aa21.61■■□□□ 1.05
COMMD3-206ENST00000468179 KIF1BO60333 1816 aa21.61■■□□□ 1.05
COMMD3-206ENST00000468179 HRCP23327 699 aa21.6■■□□□ 1.05
COMMD3-206ENST00000468179 NCOA3Q9Y6Q9 1424 aa21.59■■□□□ 1.05
COMMD3-206ENST00000468179 MSH6P52701 1360 aa21.58■■□□□ 1.05
COMMD3-206ENST00000468179 AMOTL2Q9Y2J4 779 aa21.57■■□□□ 1.04
COMMD3-206ENST00000468179 SETBP1Q9Y6X0 1596 aa21.57■■□□□ 1.04
COMMD3-206ENST00000468179 NEXMIFQ5QGS0 1516 aa21.57■■□□□ 1.04
COMMD3-206ENST00000468179 HSPA1LP34931 641 aa21.56■■□□□ 1.04
COMMD3-206ENST00000468179 CHD2O14647 1828 aaKnown RBP21.56■■□□□ 1.04
COMMD3-206ENST00000468179 C14orf37Q86TY3 774 aa21.55■■□□□ 1.04
COMMD3-206ENST00000468179 RBM33Q96EV2 1170 aaKnown RBP21.55■■□□□ 1.04
COMMD3-206ENST00000468179 ALKQ9UM73 1620 aa21.53■■□□□ 1.04
COMMD3-206ENST00000468179 RGL3Q3MIN7 710 aa21.52■■□□□ 1.03
COMMD3-206ENST00000468179 XIRP1Q702N8 1843 aaKnown RBP21.51■■□□□ 1.03
COMMD3-206ENST00000468179 FAM135BQ49AJ0 1406 aa21.51■■□□□ 1.03
COMMD3-206ENST00000468179 C19orf44Q9H6X5 657 aa21.51■■□□□ 1.03
COMMD3-206ENST00000468179 ANKRD30BQ9BXX2 1392 aa21.5■■□□□ 1.03
COMMD3-206ENST00000468179 METP08581 1390 aa21.5■■□□□ 1.03
COMMD3-206ENST00000468179 PTPRUQ92729 1446 aa21.49■■□□□ 1.03
COMMD3-206ENST00000468179 CADPS2Q86UW7 1296 aa21.49■■□□□ 1.03
COMMD3-206ENST00000468179 SLAIN2Q9P270 581 aa21.49■■□□□ 1.03
COMMD3-206ENST00000468179 NRXN3Q9Y4C0 1643 aa21.48■■□□□ 1.03
COMMD3-206ENST00000468179 ATF3P18847 181 aa21.48■■□□□ 1.03
COMMD3-206ENST00000468179 SPATA31E1Q6ZUB1 1445 aa21.47■■□□□ 1.03
COMMD3-206ENST00000468179 DISP3Q9P2K9 1392 aa21.47■■□□□ 1.03
COMMD3-206ENST00000468179 ADGRF5Q8IZF2 1346 aa21.42■■□□□ 1.02
COMMD3-206ENST00000468179 PPLO60437 1756 aa21.41■■□□□ 1.02
COMMD3-206ENST00000468179 XRN1Q8IZH2 1706 aaKnown RBP21.41■■□□□ 1.02
COMMD3-206ENST00000468179 DCCP43146 1447 aa21.4■■□□□ 1.02
COMMD3-206ENST00000468179 PTCH1Q13635 1447 aa21.37■■□□□ 1.01
COMMD3-206ENST00000468179 STAC3Q96MF2 364 aa21.36■■□□□ 1.01
COMMD3-206ENST00000468179 PRAG1Q86YV5 1406 aa21.35■■□□□ 1.01
COMMD3-206ENST00000468179 ROBO1Q9Y6N7 1651 aa21.35■■□□□ 1.01
COMMD3-206ENST00000468179 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.34■■□□□ 1.01
COMMD3-206ENST00000468179 PIK3C2GO75747 1445 aa21.33■■□□□ 1.01
COMMD3-206ENST00000468179 ADGRL3Q9HAR2 1447 aa21.33■■□□□ 1.01
COMMD3-206ENST00000468179 CNKSR2Q8WXI2 1034 aa21.32■■□□□ 1
COMMD3-206ENST00000468179 ROBO2Q9HCK4 1378 aa21.32■■□□□ 1
COMMD3-206ENST00000468179 C14orf93Q9H972 538 aaKnown RBP21.31■■□□□ 1
COMMD3-206ENST00000468179 MYOM2P54296 1465 aa21.31■■□□□ 1
COMMD3-206ENST00000468179 SETD1AO15047 1707 aaKnown RBP21.31■■□□□ 1
COMMD3-206ENST00000468179 IFT172Q9UG01 1749 aa21.3■■□□□ 1
COMMD3-206ENST00000468179 LRPPRCP42704 1394 aaKnown RBP21.3■■□□□ 1
COMMD3-206ENST00000468179 STK26Q9P289 416 aa21.29■■□□□ 1
COMMD3-206ENST00000468179 ABCC11Q96J66 1382 aa21.29■■□□□ 1
COMMD3-206ENST00000468179 NRXN1Q9ULB1 1477 aa21.28■■□□□ 1
COMMD3-206ENST00000468179 TMEM132EQ6IEE7 984 aa21.28■■□□□ 1
COMMD3-206ENST00000468179 BRINP3Q76B58 766 aa21.28■■□□□ 1
COMMD3-206ENST00000468179 DCAF11Q8TEB1 546 aa21.28■■□□□ 1
COMMD3-206ENST00000468179 MED1Q15648 1581 aaPredicted RBP21.27■■□□□ 1
COMMD3-206ENST00000468179 DHX57Q6P158 1386 aaKnown RBP21.27■■□□□ 1
COMMD3-206ENST00000468179 MST1RQ04912 1400 aa21.27■□□□□ 0.99
COMMD3-206ENST00000468179 SIRT1Q96EB6 747 aa21.27■□□□□ 0.99
COMMD3-206ENST00000468179 TECPR2O15040 1411 aa21.26■□□□□ 0.99
COMMD3-206ENST00000468179 CFAP70Q5T0N1 1121 aa21.26■□□□□ 0.99
COMMD3-206ENST00000468179 JCADQ9P266 1359 aa21.25■□□□□ 0.99
COMMD3-206ENST00000468179 KDM2AQ9Y2K7 1162 aa21.25■□□□□ 0.99
COMMD3-206ENST00000468179 YTHDC2Q9H6S0 1430 aaKnown RBP21.24■□□□□ 0.99
COMMD3-206ENST00000468179 PHLPP1O60346 1717 aa21.23■□□□□ 0.99
COMMD3-206ENST00000468179 LAMC1P11047 1609 aa21.22■□□□□ 0.99
COMMD3-206ENST00000468179 WAPLQ7Z5K2 1190 aa21.21■□□□□ 0.99
COMMD3-206ENST00000468179 AHDC1Q5TGY3 1603 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms