RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TMEM131LA2VDJ0 1609 aa17.29■□□□□ 0.36
CDHR3-205ENST00000468143 FOXD1Q16676 465 aa17.27■□□□□ 0.36
CDHR3-205ENST00000468143 ZFYVE9O95405 1425 aa17.27■□□□□ 0.35
CDHR3-205ENST00000468143 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
CDHR3-205ENST00000468143 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDHR3-205ENST00000468143 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
CDHR3-205ENST00000468143 PIP4K2BP78356 416 aa17.25■□□□□ 0.35
CDHR3-205ENST00000468143 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
CDHR3-205ENST00000468143 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
CDHR3-205ENST00000468143 STRCP1A6NGW2 1772 aa17.24■□□□□ 0.35
CDHR3-205ENST00000468143 MYO5BQ9ULV0 1848 aa17.24■□□□□ 0.35
CDHR3-205ENST00000468143 TOM1O60784 492 aa17.23■□□□□ 0.35
CDHR3-205ENST00000468143 KCNA6P17658 529 aa17.23■□□□□ 0.35
CDHR3-205ENST00000468143 PLEKHG1Q9ULL1 1385 aa17.23■□□□□ 0.35
CDHR3-205ENST00000468143 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
CDHR3-205ENST00000468143 SPHKAPQ2M3C7 1700 aa17.21■□□□□ 0.35
CDHR3-205ENST00000468143 SETD5Q9C0A6 1442 aa17.21■□□□□ 0.34
CDHR3-205ENST00000468143 PROSER2Q86WR7 435 aaPredicted RBP17.2■□□□□ 0.34
CDHR3-205ENST00000468143 TBX22Q9Y458 520 aa17.19■□□□□ 0.34
CDHR3-205ENST00000468143 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
CDHR3-205ENST00000468143 TRPM2O94759 1503 aa17.18■□□□□ 0.34
CDHR3-205ENST00000468143 TMEM94Q12767 1356 aa17.16■□□□□ 0.34
CDHR3-205ENST00000468143 ADAMTS13Q76LX8 1427 aa17.16■□□□□ 0.34
CDHR3-205ENST00000468143 RAB3GAP2Q9H2M9 1393 aa17.15■□□□□ 0.34
CDHR3-205ENST00000468143 HSPA1LP34931 641 aa17.14■□□□□ 0.33
CDHR3-205ENST00000468143 ALKQ9UM73 1620 aa17.12■□□□□ 0.33
CDHR3-205ENST00000468143 RGL3Q3MIN7 710 aa17.11■□□□□ 0.33
CDHR3-205ENST00000468143 AMOTL2Q9Y2J4 779 aa17.11■□□□□ 0.33
CDHR3-205ENST00000468143 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
CDHR3-205ENST00000468143 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
CDHR3-205ENST00000468143 CCDC144AA2RUR9 1427 aa17.09■□□□□ 0.33
CDHR3-205ENST00000468143 NEXMIFQ5QGS0 1516 aa17.09■□□□□ 0.33
CDHR3-205ENST00000468143 NWD1Q149M9 1564 aa17.08■□□□□ 0.32
CDHR3-205ENST00000468143 PTPRUQ92729 1446 aa17.08■□□□□ 0.32
CDHR3-205ENST00000468143 C14orf37Q86TY3 774 aa17.08■□□□□ 0.32
CDHR3-205ENST00000468143 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
CDHR3-205ENST00000468143 NKTRP30414 1462 aaKnown RBP17.07■□□□□ 0.32
CDHR3-205ENST00000468143 METP08581 1390 aa17.07■□□□□ 0.32
CDHR3-205ENST00000468143 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
CDHR3-205ENST00000468143 KIF1BO60333 1816 aa17.07■□□□□ 0.32
CDHR3-205ENST00000468143 PIK3R4Q99570 1358 aa17.06■□□□□ 0.32
CDHR3-205ENST00000468143 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
CDHR3-205ENST00000468143 CHD2O14647 1828 aaKnown RBP17.05■□□□□ 0.32
CDHR3-205ENST00000468143 MSH6P52701 1360 aa17.05■□□□□ 0.32
CDHR3-205ENST00000468143 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
CDHR3-205ENST00000468143 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
CDHR3-205ENST00000468143 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
CDHR3-205ENST00000468143 SLAIN2Q9P270 581 aa17.02■□□□□ 0.32
CDHR3-205ENST00000468143 DISP3Q9P2K9 1392 aa17.02■□□□□ 0.31
CDHR3-205ENST00000468143 HRCP23327 699 aa17.01■□□□□ 0.31
CDHR3-205ENST00000468143 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
CDHR3-205ENST00000468143 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
CDHR3-205ENST00000468143 FAM135BQ49AJ0 1406 aa16.98■□□□□ 0.31
CDHR3-205ENST00000468143 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
CDHR3-205ENST00000468143 ATF3P18847 181 aa16.98■□□□□ 0.31
CDHR3-205ENST00000468143 ANKRD30BQ9BXX2 1392 aa16.96■□□□□ 0.31
CDHR3-205ENST00000468143 PPLO60437 1756 aa16.95■□□□□ 0.3
CDHR3-205ENST00000468143 CADPS2Q86UW7 1296 aa16.95■□□□□ 0.3
CDHR3-205ENST00000468143 STK26Q9P289 416 aa16.95■□□□□ 0.3
CDHR3-205ENST00000468143 TMEM132EQ6IEE7 984 aa16.94■□□□□ 0.3
CDHR3-205ENST00000468143 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
CDHR3-205ENST00000468143 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
CDHR3-205ENST00000468143 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
CDHR3-205ENST00000468143 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
CDHR3-205ENST00000468143 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.91■□□□□ 0.3
CDHR3-205ENST00000468143 SOCS7O14512 581 aa16.9■□□□□ 0.3
CDHR3-205ENST00000468143 CFAP70Q5T0N1 1121 aa16.9■□□□□ 0.3
CDHR3-205ENST00000468143 ILDR2Q71H61 639 aa16.9■□□□□ 0.3
CDHR3-205ENST00000468143 DCAF11Q8TEB1 546 aa16.89■□□□□ 0.29
CDHR3-205ENST00000468143 SETD1AO15047 1707 aaKnown RBP16.89■□□□□ 0.29
CDHR3-205ENST00000468143 PIK3C2GO75747 1445 aa16.88■□□□□ 0.29
CDHR3-205ENST00000468143 WAPLQ7Z5K2 1190 aa16.88■□□□□ 0.29
CDHR3-205ENST00000468143 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
CDHR3-205ENST00000468143 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
CDHR3-205ENST00000468143 BRINP3Q76B58 766 aa16.87■□□□□ 0.29
CDHR3-205ENST00000468143 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
CDHR3-205ENST00000468143 PTCH1Q13635 1447 aa16.86■□□□□ 0.29
CDHR3-205ENST00000468143 LRPPRCP42704 1394 aaKnown RBP16.85■□□□□ 0.29
CDHR3-205ENST00000468143 DCCP43146 1447 aa16.85■□□□□ 0.29
CDHR3-205ENST00000468143 MST1RQ04912 1400 aa16.85■□□□□ 0.29
CDHR3-205ENST00000468143 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
CDHR3-205ENST00000468143 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
CDHR3-205ENST00000468143 MYOM2P54296 1465 aa16.83■□□□□ 0.28
CDHR3-205ENST00000468143 ASXL1Q8IXJ9 1541 aa16.83■□□□□ 0.28
CDHR3-205ENST00000468143 DDX17Q92841 729 aaKnown RBP16.83■□□□□ 0.28
CDHR3-205ENST00000468143 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.28
CDHR3-205ENST00000468143 NRXN1Q9ULB1 1477 aa16.82■□□□□ 0.28
CDHR3-205ENST00000468143 YTHDC2Q9H6S0 1430 aaKnown RBP16.82■□□□□ 0.28
CDHR3-205ENST00000468143 ABCC11Q96J66 1382 aa16.82■□□□□ 0.28
CDHR3-205ENST00000468143 NALCNQ8IZF0 1738 aa16.82■□□□□ 0.28
CDHR3-205ENST00000468143 DHX57Q6P158 1386 aaKnown RBP16.81■□□□□ 0.28
CDHR3-205ENST00000468143 NUTM2FA1L443 756 aa16.81■□□□□ 0.28
CDHR3-205ENST00000468143 ORAI2Q96SN7 254 aa16.81■□□□□ 0.28
CDHR3-205ENST00000468143 PHLPP1O60346 1717 aa16.81■□□□□ 0.28
CDHR3-205ENST00000468143 PRAG1Q86YV5 1406 aa16.8■□□□□ 0.28
CDHR3-205ENST00000468143 SAFB2Q14151 953 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDHR3-205ENST00000468143 C1orf167Q5SNV9 1468 aa16.79■□□□□ 0.28
CDHR3-205ENST00000468143 JCADQ9P266 1359 aa16.78■□□□□ 0.28
CDHR3-205ENST00000468143 TRIM26Q12899 539 aaPredicted RBP16.78■□□□□ 0.28
CDHR3-205ENST00000468143 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms