RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 MYOM2P54296 1465 aa17.08■□□□□ 0.32
RNF13-208ENST00000467996 UHRF1BP1Q6BDS2 1440 aa17.06■□□□□ 0.32
RNF13-208ENST00000467996 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
RNF13-208ENST00000467996 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
RNF13-208ENST00000467996 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
RNF13-208ENST00000467996 SLIT1O75093 1534 aa17.04■□□□□ 0.32
RNF13-208ENST00000467996 ZFYVE9O95405 1425 aa17.04■□□□□ 0.32
RNF13-208ENST00000467996 TRPM1Q7Z4N2 1603 aa17.03■□□□□ 0.32
RNF13-208ENST00000467996 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
RNF13-208ENST00000467996 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
RNF13-208ENST00000467996 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
RNF13-208ENST00000467996 ARHGAP23Q9P227 1491 aa17.02■□□□□ 0.32
RNF13-208ENST00000467996 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
RNF13-208ENST00000467996 PRAG1Q86YV5 1406 aa17.02■□□□□ 0.31
RNF13-208ENST00000467996 POLR1AO95602 1720 aaPredicted RBP17.01■□□□□ 0.31
RNF13-208ENST00000467996 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
RNF13-208ENST00000467996 KDM2AQ9Y2K7 1162 aa17.01■□□□□ 0.31
RNF13-208ENST00000467996 TMEM2Q9UHN6 1383 aa17.01■□□□□ 0.31
RNF13-208ENST00000467996 LAMC1P11047 1609 aa17■□□□□ 0.31
RNF13-208ENST00000467996 IQGAP1P46940 1657 aa17■□□□□ 0.31
RNF13-208ENST00000467996 PIK3C2GO75747 1445 aa16.98■□□□□ 0.31
RNF13-208ENST00000467996 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
RNF13-208ENST00000467996 NRXN3Q9Y4C0 1643 aa16.98■□□□□ 0.31
RNF13-208ENST00000467996 RALGAPBQ86X10 1494 aa16.98■□□□□ 0.31
RNF13-208ENST00000467996 LMTK3Q96Q04 1460 aa16.98■□□□□ 0.31
RNF13-208ENST00000467996 ADGRF5Q8IZF2 1346 aa16.97■□□□□ 0.31
RNF13-208ENST00000467996 SETD1AO15047 1707 aaKnown RBP16.97■□□□□ 0.31
RNF13-208ENST00000467996 NBPF8Q3BBV2 869 aa16.97■□□□□ 0.31
RNF13-208ENST00000467996 NUTM2DQ5VT03 806 aaPredicted RBP16.96■□□□□ 0.31
RNF13-208ENST00000467996 THEMISQ8N1K5 641 aaPredicted RBP16.96■□□□□ 0.31
RNF13-208ENST00000467996 SETBP1Q9Y6X0 1596 aa16.95■□□□□ 0.3
RNF13-208ENST00000467996 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
RNF13-208ENST00000467996 VGFO15240 615 aaPredicted RBP16.94■□□□□ 0.3
RNF13-208ENST00000467996 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.93■□□□□ 0.3
RNF13-208ENST00000467996 ALKQ9UM73 1620 aa16.92■□□□□ 0.3
RNF13-208ENST00000467996 HDGFP51858 240 aaKnown RBP16.91■□□□□ 0.3
RNF13-208ENST00000467996 PLEKHG1Q9ULL1 1385 aa16.9■□□□□ 0.3
RNF13-208ENST00000467996 LTKP29376 864 aa16.9■□□□□ 0.3
RNF13-208ENST00000467996 EID1Q9Y6B2 187 aa16.9■□□□□ 0.3
RNF13-208ENST00000467996 ASXL1Q8IXJ9 1541 aa16.9■□□□□ 0.3
RNF13-208ENST00000467996 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
RNF13-208ENST00000467996 ADGRB1O14514 1584 aa16.89■□□□□ 0.29
RNF13-208ENST00000467996 DIP2AQ14689 1571 aa16.89■□□□□ 0.29
RNF13-208ENST00000467996 STRCQ7RTU9 1775 aa16.88■□□□□ 0.29
RNF13-208ENST00000467996 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
RNF13-208ENST00000467996 GPRASP1Q5JY77 1395 aa16.87■□□□□ 0.29
RNF13-208ENST00000467996 MED14O60244 1454 aa16.86■□□□□ 0.29
RNF13-208ENST00000467996 CFAP70Q5T0N1 1121 aa16.86■□□□□ 0.29
RNF13-208ENST00000467996 ADAMTS13Q76LX8 1427 aa16.86■□□□□ 0.29
RNF13-208ENST00000467996 ANKLE2Q86XL3 938 aa16.85■□□□□ 0.29
RNF13-208ENST00000467996 C14orf93Q9H972 538 aaKnown RBP16.85■□□□□ 0.29
RNF13-208ENST00000467996 HSPA2P54652 639 aa16.84■□□□□ 0.29
RNF13-208ENST00000467996 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
RNF13-208ENST00000467996 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
RNF13-208ENST00000467996 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
RNF13-208ENST00000467996 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.28
RNF13-208ENST00000467996 NCKAP5LQ9HCH0 1330 aa16.81■□□□□ 0.28
RNF13-208ENST00000467996 BCANQ96GW7 911 aa16.81■□□□□ 0.28
RNF13-208ENST00000467996 CARD11Q9BXL7 1154 aa16.81■□□□□ 0.28
RNF13-208ENST00000467996 CHD2O14647 1828 aaKnown RBP16.79■□□□□ 0.28
RNF13-208ENST00000467996 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
RNF13-208ENST00000467996 METP08581 1390 aa16.78■□□□□ 0.28
RNF13-208ENST00000467996 USP47Q96K76 1375 aa16.78■□□□□ 0.28
RNF13-208ENST00000467996 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
RNF13-208ENST00000467996 CPS1P31327 1500 aa16.77■□□□□ 0.28
RNF13-208ENST00000467996 TMEM132EQ6IEE7 984 aa16.77■□□□□ 0.28
RNF13-208ENST00000467996 SLC26A8Q96RN1 970 aa16.77■□□□□ 0.28
RNF13-208ENST00000467996 QRICH2Q9H0J4 1663 aa16.77■□□□□ 0.28
RNF13-208ENST00000467996 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
RNF13-208ENST00000467996 TBX22Q9Y458 520 aa16.75■□□□□ 0.27
RNF13-208ENST00000467996 NWD1Q149M9 1564 aa16.75■□□□□ 0.27
RNF13-208ENST00000467996 LRPPRCP42704 1394 aaKnown RBP16.75■□□□□ 0.27
RNF13-208ENST00000467996 PTPRUQ92729 1446 aa16.74■□□□□ 0.27
RNF13-208ENST00000467996 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.27
RNF13-208ENST00000467996 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
RNF13-208ENST00000467996 TECPR2O15040 1411 aa16.73■□□□□ 0.27
RNF13-208ENST00000467996 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
RNF13-208ENST00000467996 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
RNF13-208ENST00000467996 STRCP1A6NGW2 1772 aa16.72■□□□□ 0.27
RNF13-208ENST00000467996 TRAK1Q9UPV9 953 aa16.71■□□□□ 0.27
RNF13-208ENST00000467996 ABCC11Q96J66 1382 aa16.7■□□□□ 0.26
RNF13-208ENST00000467996 STK26Q9P289 416 aa16.7■□□□□ 0.26
RNF13-208ENST00000467996 HIRIP3Q9BW71 556 aaPredicted RBP16.69■□□□□ 0.26
RNF13-208ENST00000467996 PTCH1Q13635 1447 aa16.69■□□□□ 0.26
RNF13-208ENST00000467996 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
RNF13-208ENST00000467996 FAM135BQ49AJ0 1406 aa16.67■□□□□ 0.26
RNF13-208ENST00000467996 CENPJQ9HC77 1338 aaPredicted RBP16.66■□□□□ 0.26
RNF13-208ENST00000467996 ROBO2Q9HCK4 1378 aa16.65■□□□□ 0.26
RNF13-208ENST00000467996 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.65■□□□□ 0.26
RNF13-208ENST00000467996 AMOTL2Q9Y2J4 779 aa16.65■□□□□ 0.26
RNF13-208ENST00000467996 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
RNF13-208ENST00000467996 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.26
RNF13-208ENST00000467996 NALCNQ8IZF0 1738 aa16.64■□□□□ 0.25
RNF13-208ENST00000467996 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
RNF13-208ENST00000467996 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.25
RNF13-208ENST00000467996 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
RNF13-208ENST00000467996 KCNA6P17658 529 aa16.63■□□□□ 0.25
RNF13-208ENST00000467996 PRAM1Q96QH2 718 aa16.63■□□□□ 0.25
RNF13-208ENST00000467996 TESK2Q96S53 571 aa16.63■□□□□ 0.25
RNF13-208ENST00000467996 TULP4Q9NRJ4 1543 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms