RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
SSR3-205ENST00000467789 EID1Q9Y6B2 187 aa15.81■□□□□ 0.12
SSR3-205ENST00000467789 ATXN8OSP0DMR3 200 aa15.8■□□□□ 0.12
SSR3-205ENST00000467789 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
SSR3-205ENST00000467789 TMEM2Q9UHN6 1383 aa15.79■□□□□ 0.12
SSR3-205ENST00000467789 IDI1Q13907 227 aa15.79■□□□□ 0.12
SSR3-205ENST00000467789 IQGAP3Q86VI3 1631 aa15.79■□□□□ 0.12
SSR3-205ENST00000467789 TXNDC2Q86VQ3 553 aa15.78■□□□□ 0.12
SSR3-205ENST00000467789 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
SSR3-205ENST00000467789 ADGRB3O60242 1522 aa15.77■□□□□ 0.11
SSR3-205ENST00000467789 UBAP1LF5GYI3 381 aa15.76■□□□□ 0.11
SSR3-205ENST00000467789 LTKP29376 864 aa15.76■□□□□ 0.11
SSR3-205ENST00000467789 ITGAEP38570 1179 aa15.75■□□□□ 0.11
SSR3-205ENST00000467789 E9PCH4 1651 aa15.74■□□□□ 0.11
SSR3-205ENST00000467789 NUP155O75694 1391 aa15.74■□□□□ 0.11
SSR3-205ENST00000467789 TOM1O60784 492 aa15.73■□□□□ 0.11
SSR3-205ENST00000467789 HDGFP51858 240 aaKnown RBP15.73■□□□□ 0.11
SSR3-205ENST00000467789 STRCP1A6NGW2 1772 aa15.71■□□□□ 0.11
SSR3-205ENST00000467789 LRRC7Q96NW7 1537 aa15.7■□□□□ 0.1
SSR3-205ENST00000467789 TMEM131LA2VDJ0 1609 aa15.7■□□□□ 0.1
SSR3-205ENST00000467789 MYO5BQ9ULV0 1848 aa15.68■□□□□ 0.1
SSR3-205ENST00000467789 ZFYVE9O95405 1425 aa15.68■□□□□ 0.1
SSR3-205ENST00000467789 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.67■□□□□ 0.1
SSR3-205ENST00000467789 NAIPQ13075 1403 aa15.67■□□□□ 0.1
SSR3-205ENST00000467789 PLEKHG1Q9ULL1 1385 aa15.65■□□□□ 0.1
SSR3-205ENST00000467789 HFM1A2PYH4 1435 aa15.65■□□□□ 0.1
SSR3-205ENST00000467789 RIMS2Q9UQ26 1411 aa15.65■□□□□ 0.1
SSR3-205ENST00000467789 SPHKAPQ2M3C7 1700 aa15.65■□□□□ 0.1
SSR3-205ENST00000467789 KCNA6P17658 529 aa15.64■□□□□ 0.09
SSR3-205ENST00000467789 PPP1R15AO75807 674 aaPredicted RBP15.63■□□□□ 0.09
SSR3-205ENST00000467789 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
SSR3-205ENST00000467789 NKTRP30414 1462 aaKnown RBP15.62■□□□□ 0.09
SSR3-205ENST00000467789 NWD1Q149M9 1564 aa15.62■□□□□ 0.09
SSR3-205ENST00000467789 XIRP1Q702N8 1843 aaKnown RBP15.61■□□□□ 0.09
SSR3-205ENST00000467789 CHGAP10645 457 aaKnown RBP15.61■□□□□ 0.09
SSR3-205ENST00000467789 PIP4K2BP78356 416 aa15.61■□□□□ 0.09
SSR3-205ENST00000467789 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
SSR3-205ENST00000467789 BCANQ96GW7 911 aa15.61■□□□□ 0.09
SSR3-205ENST00000467789 ALKQ9UM73 1620 aa15.61■□□□□ 0.09
SSR3-205ENST00000467789 TBX22Q9Y458 520 aa15.6■□□□□ 0.09
SSR3-205ENST00000467789 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
SSR3-205ENST00000467789 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
SSR3-205ENST00000467789 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
SSR3-205ENST00000467789 PIK3R4Q99570 1358 aa15.58■□□□□ 0.08
SSR3-205ENST00000467789 DISP3Q9P2K9 1392 aa15.58■□□□□ 0.08
SSR3-205ENST00000467789 TRPM2O94759 1503 aa15.58■□□□□ 0.08
SSR3-205ENST00000467789 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
SSR3-205ENST00000467789 TMEM94Q12767 1356 aa15.57■□□□□ 0.08
SSR3-205ENST00000467789 HSPA1LP34931 641 aa15.56■□□□□ 0.08
SSR3-205ENST00000467789 PROSER2Q86WR7 435 aaPredicted RBP15.56■□□□□ 0.08
SSR3-205ENST00000467789 NCOA3Q9Y6Q9 1424 aa15.55■□□□□ 0.08
SSR3-205ENST00000467789 TRIM52Q96A61 297 aa15.55■□□□□ 0.08
SSR3-205ENST00000467789 KIF1BO60333 1816 aa15.54■□□□□ 0.08
SSR3-205ENST00000467789 ADAMTS13Q76LX8 1427 aa15.54■□□□□ 0.08
SSR3-205ENST00000467789 CLTCL1P53675 1640 aa15.53■□□□□ 0.08
SSR3-205ENST00000467789 FAM135BQ49AJ0 1406 aa15.52■□□□□ 0.08
SSR3-205ENST00000467789 CAPN15O75808 1086 aa15.52■□□□□ 0.08
SSR3-205ENST00000467789 SETBP1Q9Y6X0 1596 aa15.52■□□□□ 0.07
SSR3-205ENST00000467789 MSH6P52701 1360 aa15.51■□□□□ 0.07
SSR3-205ENST00000467789 ZNF326Q5BKZ1 582 aaKnown RBP15.51■□□□□ 0.07
SSR3-205ENST00000467789 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
SSR3-205ENST00000467789 NUTM2DQ5VT03 806 aaPredicted RBP15.49■□□□□ 0.07
SSR3-205ENST00000467789 NEXMIFQ5QGS0 1516 aa15.48■□□□□ 0.07
SSR3-205ENST00000467789 NRXN3Q9Y4C0 1643 aa15.48■□□□□ 0.07
SSR3-205ENST00000467789 RPGRIP1LQ68CZ1 1315 aa15.47■□□□□ 0.07
SSR3-205ENST00000467789 MED1Q15648 1581 aaPredicted RBP15.45■□□□□ 0.06
SSR3-205ENST00000467789 ROBO1Q9Y6N7 1651 aa15.45■□□□□ 0.06
SSR3-205ENST00000467789 VGFO15240 615 aaPredicted RBP15.45■□□□□ 0.06
SSR3-205ENST00000467789 AMOTL2Q9Y2J4 779 aa15.45■□□□□ 0.06
SSR3-205ENST00000467789 XRN1Q8IZH2 1706 aaKnown RBP15.44■□□□□ 0.06
SSR3-205ENST00000467789 RBM33Q96EV2 1170 aaKnown RBP15.44■□□□□ 0.06
SSR3-205ENST00000467789 C19orf44Q9H6X5 657 aa15.44■□□□□ 0.06
SSR3-205ENST00000467789 SLAIN2Q9P270 581 aa15.44■□□□□ 0.06
SSR3-205ENST00000467789 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
SSR3-205ENST00000467789 CADPS2Q86UW7 1296 aa15.43■□□□□ 0.06
SSR3-205ENST00000467789 PTPRUQ92729 1446 aa15.43■□□□□ 0.06
SSR3-205ENST00000467789 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
SSR3-205ENST00000467789 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
SSR3-205ENST00000467789 MPHOSPH9Q99550 1183 aa15.42■□□□□ 0.06
SSR3-205ENST00000467789 CCDC144AA2RUR9 1427 aa15.42■□□□□ 0.06
SSR3-205ENST00000467789 DCCP43146 1447 aa15.42■□□□□ 0.06
SSR3-205ENST00000467789 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.41■□□□□ 0.06
SSR3-205ENST00000467789 ILDR2Q71H61 639 aa15.41■□□□□ 0.06
SSR3-205ENST00000467789 PPLO60437 1756 aa15.41■□□□□ 0.06
SSR3-205ENST00000467789 ATF3P18847 181 aa15.4■□□□□ 0.06
SSR3-205ENST00000467789 METP08581 1390 aa15.39■□□□□ 0.05
SSR3-205ENST00000467789 SETD1AO15047 1707 aaKnown RBP15.37■□□□□ 0.05
SSR3-205ENST00000467789 PRAG1Q86YV5 1406 aa15.37■□□□□ 0.05
SSR3-205ENST00000467789 SOCS7O14512 581 aa15.37■□□□□ 0.05
SSR3-205ENST00000467789 PHLPP1O60346 1717 aa15.37■□□□□ 0.05
SSR3-205ENST00000467789 ANKRD30BQ9BXX2 1392 aa15.36■□□□□ 0.05
SSR3-205ENST00000467789 PTCH1Q13635 1447 aa15.35■□□□□ 0.05
SSR3-205ENST00000467789 SPATA31E1Q6ZUB1 1445 aa15.35■□□□□ 0.05
SSR3-205ENST00000467789 RAB3GAP2Q9H2M9 1393 aa15.34■□□□□ 0.05
SSR3-205ENST00000467789 IFT172Q9UG01 1749 aa15.34■□□□□ 0.05
SSR3-205ENST00000467789 ADGRL3Q9HAR2 1447 aa15.34■□□□□ 0.05
SSR3-205ENST00000467789 AHDC1Q5TGY3 1603 aaPredicted RBP15.33■□□□□ 0.04
SSR3-205ENST00000467789 HRCP23327 699 aa15.33■□□□□ 0.04
SSR3-205ENST00000467789 JCADQ9P266 1359 aa15.32■□□□□ 0.04
SSR3-205ENST00000467789 COL16A1Q07092 1604 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms