RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 NEURL4Q96JN8 1562 aa24.73■■□□□ 1.55
VARS2-204ENST00000467717 UBR1Q8IWV7 1749 aa24.72■■□□□ 1.55
VARS2-204ENST00000467717 ANKLE2Q86XL3 938 aa24.72■■□□□ 1.55
VARS2-204ENST00000467717 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.72■■□□□ 1.55
VARS2-204ENST00000467717 DMRT2Q9Y5R5 561 aa24.72■■□□□ 1.55
VARS2-204ENST00000467717 EID1Q9Y6B2 187 aa24.72■■□□□ 1.55
VARS2-204ENST00000467717 ARHGAP23Q9P227 1491 aa24.71■■□□□ 1.55
VARS2-204ENST00000467717 TXNDC2Q86VQ3 553 aa24.71■■□□□ 1.55
VARS2-204ENST00000467717 SLIT1O75093 1534 aa24.71■■□□□ 1.55
VARS2-204ENST00000467717 RIMS2Q9UQ26 1411 aa24.7■■□□□ 1.55
VARS2-204ENST00000467717 ZFYVE9O95405 1425 aa24.69■■□□□ 1.54
VARS2-204ENST00000467717 LTKP29376 864 aa24.68■■□□□ 1.54
VARS2-204ENST00000467717 KIF1BO60333 1816 aa24.68■■□□□ 1.54
VARS2-204ENST00000467717 PPP1R15AO75807 674 aaPredicted RBP24.67■■□□□ 1.54
VARS2-204ENST00000467717 VGFO15240 615 aaPredicted RBP24.66■■□□□ 1.54
VARS2-204ENST00000467717 NUTM2DQ5VT03 806 aaPredicted RBP24.66■■□□□ 1.54
VARS2-204ENST00000467717 TONSLQ96HA7 1378 aa24.66■■□□□ 1.54
VARS2-204ENST00000467717 DCAF11Q8TEB1 546 aa24.65■■□□□ 1.54
VARS2-204ENST00000467717 L3MBTL2Q969R5 705 aa24.65■■□□□ 1.54
VARS2-204ENST00000467717 STAC3Q96MF2 364 aa24.65■■□□□ 1.54
VARS2-204ENST00000467717 SCAF11Q99590 1463 aaKnown RBP24.64■■□□□ 1.54
VARS2-204ENST00000467717 NCKAP5LQ9HCH0 1330 aa24.64■■□□□ 1.54
VARS2-204ENST00000467717 TIMELESSQ9UNS1 1208 aa24.63■■□□□ 1.53
VARS2-204ENST00000467717 NEXMIFQ5QGS0 1516 aa24.62■■□□□ 1.53
VARS2-204ENST00000467717 IQSEC2Q5JU85 1478 aa24.6■■□□□ 1.53
VARS2-204ENST00000467717 KDM2AQ9Y2K7 1162 aa24.6■■□□□ 1.53
VARS2-204ENST00000467717 LTBP4Q8N2S1 1624 aa24.6■■□□□ 1.53
VARS2-204ENST00000467717 PLEKHG1Q9ULL1 1385 aa24.58■■□□□ 1.53
VARS2-204ENST00000467717 ADGRF5Q8IZF2 1346 aa24.58■■□□□ 1.52
VARS2-204ENST00000467717 MYO5BQ9ULV0 1848 aa24.57■■□□□ 1.52
VARS2-204ENST00000467717 BCANQ96GW7 911 aa24.57■■□□□ 1.52
VARS2-204ENST00000467717 MED14O60244 1454 aa24.57■■□□□ 1.52
VARS2-204ENST00000467717 NPHP4O75161 1426 aaPredicted RBP24.56■■□□□ 1.52
VARS2-204ENST00000467717 MYOM2P54296 1465 aa24.56■■□□□ 1.52
VARS2-204ENST00000467717 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
VARS2-204ENST00000467717 NRXN1Q9ULB1 1477 aa24.51■■□□□ 1.51
VARS2-204ENST00000467717 PIK3C2GO75747 1445 aa24.5■■□□□ 1.51
VARS2-204ENST00000467717 PPLO60437 1756 aa24.49■■□□□ 1.51
VARS2-204ENST00000467717 SLC26A8Q96RN1 970 aa24.49■■□□□ 1.51
VARS2-204ENST00000467717 TBX22Q9Y458 520 aa24.48■■□□□ 1.51
VARS2-204ENST00000467717 ADAMTS13Q76LX8 1427 aa24.47■■□□□ 1.51
VARS2-204ENST00000467717 PRAG1Q86YV5 1406 aa24.47■■□□□ 1.51
VARS2-204ENST00000467717 C14orf93Q9H972 538 aaKnown RBP24.47■■□□□ 1.51
VARS2-204ENST00000467717 IFT172Q9UG01 1749 aa24.47■■□□□ 1.51
VARS2-204ENST00000467717 SETBP1Q9Y6X0 1596 aa24.46■■□□□ 1.51
VARS2-204ENST00000467717 POLR1AO95602 1720 aaPredicted RBP24.44■■□□□ 1.5
VARS2-204ENST00000467717 CFAP70Q5T0N1 1121 aa24.44■■□□□ 1.5
VARS2-204ENST00000467717 NBPF8Q3BBV2 869 aa24.42■■□□□ 1.5
VARS2-204ENST00000467717 IQGAP1P46940 1657 aa24.41■■□□□ 1.5
VARS2-204ENST00000467717 METP08581 1390 aa24.38■■□□□ 1.49
VARS2-204ENST00000467717 PIK3R4Q99570 1358 aa24.38■■□□□ 1.49
VARS2-204ENST00000467717 ALKQ9UM73 1620 aa24.38■■□□□ 1.49
VARS2-204ENST00000467717 NRXN3Q9Y4C0 1643 aa24.38■■□□□ 1.49
VARS2-204ENST00000467717 DIP2AQ14689 1571 aa24.37■■□□□ 1.49
VARS2-204ENST00000467717 TMEM132EQ6IEE7 984 aa24.35■■□□□ 1.49
VARS2-204ENST00000467717 NBPF1Q3BBV0 1214 aa24.34■■□□□ 1.49
VARS2-204ENST00000467717 KCNA6P17658 529 aa24.33■■□□□ 1.49
VARS2-204ENST00000467717 ZEB1P37275 1124 aaPredicted RBP24.33■■□□□ 1.49
VARS2-204ENST00000467717 UBAP1LF5GYI3 381 aa24.32■■□□□ 1.48
VARS2-204ENST00000467717 ROCK2O75116 1388 aaKnown RBP24.31■■□□□ 1.48
VARS2-204ENST00000467717 AMOTL2Q9Y2J4 779 aa24.31■■□□□ 1.48
VARS2-204ENST00000467717 ZNF335Q9H4Z2 1342 aaPredicted RBP24.3■■□□□ 1.48
VARS2-204ENST00000467717 LRPPRCP42704 1394 aaKnown RBP24.29■■□□□ 1.48
VARS2-204ENST00000467717 PTPRUQ92729 1446 aa24.29■■□□□ 1.48
VARS2-204ENST00000467717 LAMC1P11047 1609 aa24.29■■□□□ 1.48
VARS2-204ENST00000467717 RALGAPBQ86X10 1494 aa24.29■■□□□ 1.48
VARS2-204ENST00000467717 MED1Q15648 1581 aaPredicted RBP24.29■■□□□ 1.48
VARS2-204ENST00000467717 ASXL1Q8IXJ9 1541 aa24.28■■□□□ 1.48
VARS2-204ENST00000467717 ADGRB1O14514 1584 aa24.28■■□□□ 1.48
VARS2-204ENST00000467717 YTHDC2Q9H6S0 1430 aaKnown RBP24.27■■□□□ 1.48
VARS2-204ENST00000467717 STK26Q9P289 416 aa24.27■■□□□ 1.48
VARS2-204ENST00000467717 GPRASP1Q5JY77 1395 aa24.27■■□□□ 1.48
VARS2-204ENST00000467717 ABCC11Q96J66 1382 aa24.27■■□□□ 1.48
VARS2-204ENST00000467717 CARD11Q9BXL7 1154 aa24.26■■□□□ 1.47
VARS2-204ENST00000467717 SETD1AO15047 1707 aaKnown RBP24.25■■□□□ 1.47
VARS2-204ENST00000467717 KIAA1210Q9ULL0 1709 aa24.25■■□□□ 1.47
VARS2-204ENST00000467717 TRPM1Q7Z4N2 1603 aa24.23■■□□□ 1.47
VARS2-204ENST00000467717 TECPR2O15040 1411 aa24.22■■□□□ 1.47
VARS2-204ENST00000467717 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
VARS2-204ENST00000467717 SIRT1Q96EB6 747 aa24.21■■□□□ 1.47
VARS2-204ENST00000467717 NWD1Q149M9 1564 aa24.2■■□□□ 1.46
VARS2-204ENST00000467717 NKTRP30414 1462 aaKnown RBP24.19■■□□□ 1.46
VARS2-204ENST00000467717 PTCH1Q13635 1447 aa24.19■■□□□ 1.46
VARS2-204ENST00000467717 ROBO2Q9HCK4 1378 aa24.19■■□□□ 1.46
VARS2-204ENST00000467717 PROSER2Q86WR7 435 aaPredicted RBP24.18■■□□□ 1.46
VARS2-204ENST00000467717 CPS1P31327 1500 aa24.16■■□□□ 1.46
VARS2-204ENST00000467717 FAM135BQ49AJ0 1406 aa24.16■■□□□ 1.46
VARS2-204ENST00000467717 XRN1Q8IZH2 1706 aaKnown RBP24.15■■□□□ 1.46
VARS2-204ENST00000467717 CHD2O14647 1828 aaKnown RBP24.15■■□□□ 1.46
VARS2-204ENST00000467717 PRAM1Q96QH2 718 aa24.15■■□□□ 1.46
VARS2-204ENST00000467717 POGKQ9P215 609 aa24.15■■□□□ 1.46
VARS2-204ENST00000467717 DLC1Q96QB1 1528 aa24.15■■□□□ 1.46
VARS2-204ENST00000467717 WAPLQ7Z5K2 1190 aa24.14■■□□□ 1.45
VARS2-204ENST00000467717 TMEM94Q12767 1356 aa24.14■■□□□ 1.45
VARS2-204ENST00000467717 EIF3AQ14152 1382 aaKnown RBP24.14■■□□□ 1.45
VARS2-204ENST00000467717 RBM33Q96EV2 1170 aaKnown RBP24.12■■□□□ 1.45
VARS2-204ENST00000467717 LRRC7Q96NW7 1537 aa24.11■■□□□ 1.45
VARS2-204ENST00000467717 HSPA1LP34931 641 aa24.11■■□□□ 1.45
VARS2-204ENST00000467717 PLEKHH1Q9ULM0 1364 aa24.11■■□□□ 1.45
VARS2-204ENST00000467717 USP47Q96K76 1375 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms