RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 PHLPP1O60346 1717 aa30.1■■■□□ 2.41
FAM53A-204ENST00000467215 TMEM131LA2VDJ0 1609 aa30.09■■■□□ 2.41
FAM53A-204ENST00000467215 UNC13BO14795 1591 aa30.09■■■□□ 2.41
FAM53A-204ENST00000467215 KCNA6P17658 529 aa30.09■■■□□ 2.41
FAM53A-204ENST00000467215 RBM33Q96EV2 1170 aaKnown RBP30.09■■■□□ 2.41
FAM53A-204ENST00000467215 ZFYVE9O95405 1425 aa30.07■■■□□ 2.4
FAM53A-204ENST00000467215 SETD1AO15047 1707 aaKnown RBP30.05■■■□□ 2.4
FAM53A-204ENST00000467215 ANKRD50Q9ULJ7 1429 aa30.05■■■□□ 2.4
FAM53A-204ENST00000467215 E9PCH4 1651 aa30.04■■■□□ 2.4
FAM53A-204ENST00000467215 PROSER2Q86WR7 435 aaPredicted RBP30.04■■■□□ 2.4
FAM53A-204ENST00000467215 MSH6P52701 1360 aa30■■■□□ 2.39
FAM53A-204ENST00000467215 PLEKHG1Q9ULL1 1385 aa30■■■□□ 2.39
FAM53A-204ENST00000467215 COL16A1Q07092 1604 aaPredicted RBP30■■■□□ 2.39
FAM53A-204ENST00000467215 RIMS2Q9UQ26 1411 aa29.99■■■□□ 2.39
FAM53A-204ENST00000467215 SLC52A1Q9NWF4 448 aa29.99■■■□□ 2.39
FAM53A-204ENST00000467215 FAM50AQ14320 339 aaKnown RBP29.96■■■□□ 2.39
FAM53A-204ENST00000467215 BCANQ96GW7 911 aa29.96■■■□□ 2.39
FAM53A-204ENST00000467215 IQGAP3Q86VI3 1631 aa29.96■■■□□ 2.39
FAM53A-204ENST00000467215 DIP2AQ14689 1571 aa29.94■■■□□ 2.38
FAM53A-204ENST00000467215 POTEAQ6S8J7 498 aa29.93■■■□□ 2.38
FAM53A-204ENST00000467215 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.91■■■□□ 2.38
FAM53A-204ENST00000467215 PPP1R15AO75807 674 aaPredicted RBP29.89■■■□□ 2.38
FAM53A-204ENST00000467215 ADAMTS13Q76LX8 1427 aa29.88■■■□□ 2.37
FAM53A-204ENST00000467215 JCADQ9P266 1359 aa29.85■■■□□ 2.37
FAM53A-204ENST00000467215 AHDC1Q5TGY3 1603 aaPredicted RBP29.85■■■□□ 2.37
FAM53A-204ENST00000467215 SHPRHQ149N8 1683 aa29.85■■■□□ 2.37
FAM53A-204ENST00000467215 SLAIN2Q9P270 581 aa29.84■■■□□ 2.37
FAM53A-204ENST00000467215 LRP6O75581 1613 aa29.84■■■□□ 2.37
FAM53A-204ENST00000467215 TRPM2O94759 1503 aa29.82■■■□□ 2.36
FAM53A-204ENST00000467215 SPHKAPQ2M3C7 1700 aa29.81■■■□□ 2.36
FAM53A-204ENST00000467215 NRXN3Q9Y4C0 1643 aa29.81■■■□□ 2.36
FAM53A-204ENST00000467215 CHGAP10645 457 aaKnown RBP29.8■■■□□ 2.36
FAM53A-204ENST00000467215 XRN1Q8IZH2 1706 aaKnown RBP29.79■■■□□ 2.36
FAM53A-204ENST00000467215 NCOA3Q9Y6Q9 1424 aa29.79■■■□□ 2.36
FAM53A-204ENST00000467215 NUTM2DQ5VT03 806 aaPredicted RBP29.78■■■□□ 2.36
FAM53A-204ENST00000467215 TBX22Q9Y458 520 aa29.77■■■□□ 2.36
FAM53A-204ENST00000467215 ROCK1Q13464 1354 aa29.76■■■□□ 2.35
FAM53A-204ENST00000467215 HDGFP51858 240 aaKnown RBP29.75■■■□□ 2.35
FAM53A-204ENST00000467215 C14orf37Q86TY3 774 aa29.74■■■□□ 2.35
FAM53A-204ENST00000467215 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.74■■■□□ 2.35
FAM53A-204ENST00000467215 PIK3R4Q99570 1358 aa29.74■■■□□ 2.35
FAM53A-204ENST00000467215 PTPRUQ92729 1446 aa29.73■■■□□ 2.35
FAM53A-204ENST00000467215 SETBP1Q9Y6X0 1596 aa29.7■■■□□ 2.35
FAM53A-204ENST00000467215 NHSL1Q5SYE7 1610 aa29.69■■■□□ 2.34
FAM53A-204ENST00000467215 NUP155O75694 1391 aa29.66■■■□□ 2.34
FAM53A-204ENST00000467215 NALCNQ8IZF0 1738 aa29.66■■■□□ 2.34
FAM53A-204ENST00000467215 SPATA31A6Q5VVP1 1343 aa29.66■■■□□ 2.34
FAM53A-204ENST00000467215 ASXL1Q8IXJ9 1541 aa29.66■■■□□ 2.34
FAM53A-204ENST00000467215 CADPS2Q86UW7 1296 aa29.65■■■□□ 2.34
FAM53A-204ENST00000467215 DCCP43146 1447 aa29.64■■■□□ 2.34
FAM53A-204ENST00000467215 C19orf44Q9H6X5 657 aa29.63■■■□□ 2.33
FAM53A-204ENST00000467215 CLTCL1P53675 1640 aa29.63■■■□□ 2.33
FAM53A-204ENST00000467215 ATF3P18847 181 aa29.62■■■□□ 2.33
FAM53A-204ENST00000467215 MEX3CQ5U5Q3 659 aaKnown RBP29.6■■■□□ 2.33
FAM53A-204ENST00000467215 AMOTL2Q9Y2J4 779 aa29.6■■■□□ 2.33
FAM53A-204ENST00000467215 MST1RQ04912 1400 aa29.58■■■□□ 2.33
FAM53A-204ENST00000467215 NEXMIFQ5QGS0 1516 aa29.58■■■□□ 2.33
FAM53A-204ENST00000467215 BRINP3Q76B58 766 aa29.58■■■□□ 2.33
FAM53A-204ENST00000467215 ITGAEP38570 1179 aa29.56■■■□□ 2.32
FAM53A-204ENST00000467215 KIF1BO60333 1816 aa29.56■■■□□ 2.32
FAM53A-204ENST00000467215 ZNF772Q68DY9 489 aaPredicted RBP29.52■■■□□ 2.32
FAM53A-204ENST00000467215 TRIM52Q96A61 297 aa29.52■■■□□ 2.32
FAM53A-204ENST00000467215 ADGRL3Q9HAR2 1447 aa29.52■■■□□ 2.32
FAM53A-204ENST00000467215 METP08581 1390 aa29.52■■■□□ 2.32
FAM53A-204ENST00000467215 SETD5Q9C0A6 1442 aa29.5■■■□□ 2.31
FAM53A-204ENST00000467215 NUTM2BA6NNL0 878 aaPredicted RBP29.47■■■□□ 2.31
FAM53A-204ENST00000467215 NUTM2EB1AL46 878 aaPredicted RBP29.47■■■□□ 2.31
FAM53A-204ENST00000467215 NUTM2AQ8IVF1 878 aaPredicted RBP29.47■■■□□ 2.31
FAM53A-204ENST00000467215 ZNF326Q5BKZ1 582 aaKnown RBP29.46■■■□□ 2.31
FAM53A-204ENST00000467215 CDK12Q9NYV4 1490 aaPredicted RBP29.45■■■□□ 2.31
FAM53A-204ENST00000467215 LAMC1P11047 1609 aa29.43■■■□□ 2.3
FAM53A-204ENST00000467215 UPF1Q92900 1129 aaKnown RBP eCLIP29.43■■■□□ 2.3
FAM53A-204ENST00000467215 AFF2P51816 1311 aa29.42■■■□□ 2.3
FAM53A-204ENST00000467215 PPARGC1BQ86YN6 1023 aaKnown RBP29.41■■■□□ 2.3
FAM53A-204ENST00000467215 PNPLA6Q8IY17 1366 aa29.4■■■□□ 2.3
FAM53A-204ENST00000467215 RGS12O14924 1447 aa29.38■■■□□ 2.29
FAM53A-204ENST00000467215 DDX17Q92841 729 aaKnown RBP29.38■■■□□ 2.29
FAM53A-204ENST00000467215 PPLO60437 1756 aa29.38■■■□□ 2.29
FAM53A-204ENST00000467215 PTCH1Q13635 1447 aa29.37■■■□□ 2.29
FAM53A-204ENST00000467215 RXRBP28702 533 aa29.37■■■□□ 2.29
FAM53A-204ENST00000467215 C1orf167Q5SNV9 1468 aa29.35■■■□□ 2.29
FAM53A-204ENST00000467215 NAIPQ13075 1403 aa29.34■■■□□ 2.29
FAM53A-204ENST00000467215 LRRC59Q96AG4 307 aaKnown RBP29.31■■■□□ 2.28
FAM53A-204ENST00000467215 RRBP1Q9P2E9 1410 aaKnown RBP29.3■■■□□ 2.28
FAM53A-204ENST00000467215 C8orf37Q96NL8 207 aa29.3■■■□□ 2.28
FAM53A-204ENST00000467215 PRAG1Q86YV5 1406 aa29.29■■■□□ 2.28
FAM53A-204ENST00000467215 ROBO2Q9HCK4 1378 aa29.29■■■□□ 2.28
FAM53A-204ENST00000467215 COL22A1Q8NFW1 1626 aaPredicted RBP29.27■■■□□ 2.28
FAM53A-204ENST00000467215 CDC42BPGQ6DT37 1551 aa29.24■■■□□ 2.27
FAM53A-204ENST00000467215 MARF1Q9Y4F3 1742 aaKnown RBP29.23■■■□□ 2.27
FAM53A-204ENST00000467215 IFT172Q9UG01 1749 aa29.2■■■□□ 2.27
FAM53A-204ENST00000467215 ADAMTS2O95450 1211 aa29.19■■■□□ 2.26
FAM53A-204ENST00000467215 RBM6P78332 1123 aaKnown RBP29.19■■■□□ 2.26
FAM53A-204ENST00000467215 ORAI2Q96SN7 254 aa29.18■■■□□ 2.26
FAM53A-204ENST00000467215 QTRT2Q9H974 415 aaKnown RBP29.18■■■□□ 2.26
FAM53A-204ENST00000467215 HFM1A2PYH4 1435 aa29.18■■■□□ 2.26
FAM53A-204ENST00000467215 SOS2Q07890 1332 aaPredicted RBP29.18■■■□□ 2.26
FAM53A-204ENST00000467215 KNDC1Q76NI1 1749 aa29.15■■■□□ 2.26
FAM53A-204ENST00000467215 VGFO15240 615 aaPredicted RBP29.14■■■□□ 2.26
FAM53A-204ENST00000467215 MYOM2P54296 1465 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms