RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 LTKP29376 864 aa20.37■□□□□ 0.85
UBA3-209ENST00000466763 HDGFP51858 240 aaKnown RBP20.37■□□□□ 0.85
UBA3-209ENST00000466763 NUTM2DQ5VT03 806 aaPredicted RBP20.37■□□□□ 0.85
UBA3-209ENST00000466763 BCANQ96GW7 911 aa20.37■□□□□ 0.85
UBA3-209ENST00000466763 KDM5AP29375 1690 aaKnown RBP20.37■□□□□ 0.85
UBA3-209ENST00000466763 KIF1BO60333 1816 aa20.37■□□□□ 0.85
UBA3-209ENST00000466763 SLIT1O75093 1534 aa20.34■□□□□ 0.85
UBA3-209ENST00000466763 SCAF11Q99590 1463 aaKnown RBP20.34■□□□□ 0.85
UBA3-209ENST00000466763 ARHGAP23Q9P227 1491 aa20.34■□□□□ 0.85
UBA3-209ENST00000466763 RIMS2Q9UQ26 1411 aa20.34■□□□□ 0.85
UBA3-209ENST00000466763 NPHP4O75161 1426 aaPredicted RBP20.33■□□□□ 0.84
UBA3-209ENST00000466763 RGL3Q3MIN7 710 aa20.32■□□□□ 0.84
UBA3-209ENST00000466763 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
UBA3-209ENST00000466763 NEURL4Q96JN8 1562 aa20.3■□□□□ 0.84
UBA3-209ENST00000466763 ANKRD30BQ9BXX2 1392 aa20.3■□□□□ 0.84
UBA3-209ENST00000466763 ZFYVE9O95405 1425 aa20.27■□□□□ 0.84
UBA3-209ENST00000466763 IQGAP1P46940 1657 aa20.27■□□□□ 0.84
UBA3-209ENST00000466763 MED14O60244 1454 aa20.27■□□□□ 0.84
UBA3-209ENST00000466763 SLC26A8Q96RN1 970 aa20.26■□□□□ 0.83
UBA3-209ENST00000466763 DHX57Q6P158 1386 aaKnown RBP20.24■□□□□ 0.83
UBA3-209ENST00000466763 RPGRIP1LQ68CZ1 1315 aa20.23■□□□□ 0.83
UBA3-209ENST00000466763 ZNF335Q9H4Z2 1342 aaPredicted RBP20.23■□□□□ 0.83
UBA3-209ENST00000466763 PLEKHG1Q9ULL1 1385 aa20.22■□□□□ 0.83
UBA3-209ENST00000466763 VGFO15240 615 aaPredicted RBP20.21■□□□□ 0.83
UBA3-209ENST00000466763 NEXMIFQ5QGS0 1516 aa20.21■□□□□ 0.83
UBA3-209ENST00000466763 SPATA31E1Q6ZUB1 1445 aa20.2■□□□□ 0.82
UBA3-209ENST00000466763 NEUROD1Q13562 356 aa20.19■□□□□ 0.82
UBA3-209ENST00000466763 SIN3AQ96ST3 1273 aa20.18■□□□□ 0.82
UBA3-209ENST00000466763 KDM2AQ9Y2K7 1162 aa20.17■□□□□ 0.82
UBA3-209ENST00000466763 PPLO60437 1756 aa20.16■□□□□ 0.82
UBA3-209ENST00000466763 ADGRF5Q8IZF2 1346 aa20.14■□□□□ 0.81
UBA3-209ENST00000466763 DCAF11Q8TEB1 546 aa20.14■□□□□ 0.81
UBA3-209ENST00000466763 TBX22Q9Y458 520 aa20.14■□□□□ 0.81
UBA3-209ENST00000466763 CERKQ8TCT0 537 aa20.12■□□□□ 0.81
UBA3-209ENST00000466763 ADAMTS13Q76LX8 1427 aa20.11■□□□□ 0.81
UBA3-209ENST00000466763 KCNA6P17658 529 aa20.1■□□□□ 0.81
UBA3-209ENST00000466763 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
UBA3-209ENST00000466763 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
UBA3-209ENST00000466763 SETBP1Q9Y6X0 1596 aa20.08■□□□□ 0.81
UBA3-209ENST00000466763 NRXN3Q9Y4C0 1643 aa20.07■□□□□ 0.8
UBA3-209ENST00000466763 DIP2AQ14689 1571 aa20.07■□□□□ 0.8
UBA3-209ENST00000466763 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
UBA3-209ENST00000466763 PROSER2Q86WR7 435 aaPredicted RBP20.06■□□□□ 0.8
UBA3-209ENST00000466763 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
UBA3-209ENST00000466763 AMOTL2Q9Y2J4 779 aa20.05■□□□□ 0.8
UBA3-209ENST00000466763 CPS1P31327 1500 aa20.05■□□□□ 0.8
UBA3-209ENST00000466763 METP08581 1390 aa20.05■□□□□ 0.8
UBA3-209ENST00000466763 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
UBA3-209ENST00000466763 CHD2O14647 1828 aaKnown RBP20.04■□□□□ 0.8
UBA3-209ENST00000466763 L3MBTL2Q969R5 705 aa20.03■□□□□ 0.8
UBA3-209ENST00000466763 RBM33Q96EV2 1170 aaKnown RBP20.03■□□□□ 0.8
UBA3-209ENST00000466763 PIK3R4Q99570 1358 aa20.03■□□□□ 0.8
UBA3-209ENST00000466763 MYOM2P54296 1465 aa20.03■□□□□ 0.8
UBA3-209ENST00000466763 CFAP70Q5T0N1 1121 aa20.02■□□□□ 0.8
UBA3-209ENST00000466763 STAC3Q96MF2 364 aa20.02■□□□□ 0.8
UBA3-209ENST00000466763 TMEM132EQ6IEE7 984 aa20.01■□□□□ 0.79
UBA3-209ENST00000466763 PIK3C2GO75747 1445 aa20.01■□□□□ 0.79
UBA3-209ENST00000466763 PTPRUQ92729 1446 aa20.01■□□□□ 0.79
UBA3-209ENST00000466763 C14orf93Q9H972 538 aaKnown RBP20■□□□□ 0.79
UBA3-209ENST00000466763 STK26Q9P289 416 aa20■□□□□ 0.79
UBA3-209ENST00000466763 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
UBA3-209ENST00000466763 LRRC7Q96NW7 1537 aa19.99■□□□□ 0.79
UBA3-209ENST00000466763 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
UBA3-209ENST00000466763 NWD1Q149M9 1564 aa19.98■□□□□ 0.79
UBA3-209ENST00000466763 NRXN1Q9ULB1 1477 aa19.98■□□□□ 0.79
UBA3-209ENST00000466763 TMEM94Q12767 1356 aa19.97■□□□□ 0.79
UBA3-209ENST00000466763 SETD1AO15047 1707 aaKnown RBP19.96■□□□□ 0.79
UBA3-209ENST00000466763 NKTRP30414 1462 aaKnown RBP19.96■□□□□ 0.79
UBA3-209ENST00000466763 UBAP1LF5GYI3 381 aa19.94■□□□□ 0.78
UBA3-209ENST00000466763 CACNB1Q02641 598 aaPredicted RBP19.93■□□□□ 0.78
UBA3-209ENST00000466763 CLSPNQ9HAW4 1339 aa19.93■□□□□ 0.78
UBA3-209ENST00000466763 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
UBA3-209ENST00000466763 LAMC1P11047 1609 aa19.92■□□□□ 0.78
UBA3-209ENST00000466763 XRN1Q8IZH2 1706 aaKnown RBP19.91■□□□□ 0.78
UBA3-209ENST00000466763 XIRP1Q702N8 1843 aaKnown RBP19.9■□□□□ 0.78
UBA3-209ENST00000466763 TOM1O60784 492 aa19.9■□□□□ 0.78
UBA3-209ENST00000466763 FBXO41Q8TF61 875 aa19.9■□□□□ 0.78
UBA3-209ENST00000466763 LRPPRCP42704 1394 aaKnown RBP19.9■□□□□ 0.78
UBA3-209ENST00000466763 PRAG1Q86YV5 1406 aa19.9■□□□□ 0.78
UBA3-209ENST00000466763 YTHDC2Q9H6S0 1430 aaKnown RBP19.9■□□□□ 0.78
UBA3-209ENST00000466763 ASXL1Q8IXJ9 1541 aa19.9■□□□□ 0.78
UBA3-209ENST00000466763 MSH6P52701 1360 aa19.89■□□□□ 0.77
UBA3-209ENST00000466763 ROBO2Q9HCK4 1378 aa19.88■□□□□ 0.77
UBA3-209ENST00000466763 PIP4K2BP78356 416 aa19.88■□□□□ 0.77
UBA3-209ENST00000466763 TRAK1Q9UPV9 953 aa19.88■□□□□ 0.77
UBA3-209ENST00000466763 NBPF1Q3BBV0 1214 aa19.87■□□□□ 0.77
UBA3-209ENST00000466763 WAPLQ7Z5K2 1190 aa19.87■□□□□ 0.77
UBA3-209ENST00000466763 ABCC11Q96J66 1382 aa19.86■□□□□ 0.77
UBA3-209ENST00000466763 DCAF8L1A6NGE4 600 aa19.86■□□□□ 0.77
UBA3-209ENST00000466763 SAFB2Q14151 953 aaKnown RBP eCLIP19.85■□□□□ 0.77
UBA3-209ENST00000466763 NBPF8Q3BBV2 869 aa19.85■□□□□ 0.77
UBA3-209ENST00000466763 C19orf44Q9H6X5 657 aa19.85■□□□□ 0.77
UBA3-209ENST00000466763 POGKQ9P215 609 aa19.85■□□□□ 0.77
UBA3-209ENST00000466763 PTCH1Q13635 1447 aa19.85■□□□□ 0.77
UBA3-209ENST00000466763 ATF3P18847 181 aa19.84■□□□□ 0.77
UBA3-209ENST00000466763 NCOA3Q9Y6Q9 1424 aa19.84■□□□□ 0.77
UBA3-209ENST00000466763 ADGRB1O14514 1584 aa19.83■□□□□ 0.76
UBA3-209ENST00000466763 KIAA1210Q9ULL0 1709 aa19.82■□□□□ 0.76
UBA3-209ENST00000466763 ILDR1Q86SU0 546 aaPredicted RBP19.82■□□□□ 0.76
UBA3-209ENST00000466763 PRAM1Q96QH2 718 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms