RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 NWD1Q149M9 1564 aa25.16■■□□□ 1.62
BRD9-201ENST00000466684 HDGFP51858 240 aaKnown RBP25.14■■□□□ 1.62
BRD9-201ENST00000466684 ZFYVE9O95405 1425 aa25.12■■□□□ 1.61
BRD9-201ENST00000466684 PLEKHG1Q9ULL1 1385 aa25.11■■□□□ 1.61
BRD9-201ENST00000466684 GCC2Q8IWJ2 1684 aa25.11■■□□□ 1.61
BRD9-201ENST00000466684 ROBO1Q9Y6N7 1651 aa25.11■■□□□ 1.61
BRD9-201ENST00000466684 PPP1R15AO75807 674 aaPredicted RBP25.11■■□□□ 1.61
BRD9-201ENST00000466684 RBM33Q96EV2 1170 aaKnown RBP25.11■■□□□ 1.61
BRD9-201ENST00000466684 MSH6P52701 1360 aa25.11■■□□□ 1.61
BRD9-201ENST00000466684 UNC13BO14795 1591 aa25.1■■□□□ 1.61
BRD9-201ENST00000466684 RIMS2Q9UQ26 1411 aa25.09■■□□□ 1.61
BRD9-201ENST00000466684 MYO5BQ9ULV0 1848 aa25.08■■□□□ 1.61
BRD9-201ENST00000466684 TMEM131LA2VDJ0 1609 aa25.08■■□□□ 1.61
BRD9-201ENST00000466684 RGS17Q9UGC6 210 aaPredicted RBP25.07■■□□□ 1.6
BRD9-201ENST00000466684 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.06■■□□□ 1.6
BRD9-201ENST00000466684 ROCK1Q13464 1354 aa25.05■■□□□ 1.6
BRD9-201ENST00000466684 CHD2O14647 1828 aaKnown RBP25.05■■□□□ 1.6
BRD9-201ENST00000466684 TBX22Q9Y458 520 aa25.03■■□□□ 1.6
BRD9-201ENST00000466684 CHGAP10645 457 aaKnown RBP25.03■■□□□ 1.6
BRD9-201ENST00000466684 SLAIN2Q9P270 581 aa25.03■■□□□ 1.6
BRD9-201ENST00000466684 E9PCH4 1651 aa25.02■■□□□ 1.6
BRD9-201ENST00000466684 NCOA3Q9Y6Q9 1424 aa25■■□□□ 1.59
BRD9-201ENST00000466684 IQGAP3Q86VI3 1631 aa25■■□□□ 1.59
BRD9-201ENST00000466684 DIP2AQ14689 1571 aa24.97■■□□□ 1.59
BRD9-201ENST00000466684 PHLPP1O60346 1717 aa24.97■■□□□ 1.59
BRD9-201ENST00000466684 PIK3R4Q99570 1358 aa24.96■■□□□ 1.59
BRD9-201ENST00000466684 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
BRD9-201ENST00000466684 NUP155O75694 1391 aa24.95■■□□□ 1.58
BRD9-201ENST00000466684 C14orf37Q86TY3 774 aa24.95■■□□□ 1.58
BRD9-201ENST00000466684 JCADQ9P266 1359 aa24.94■■□□□ 1.58
BRD9-201ENST00000466684 NUTM2DQ5VT03 806 aaPredicted RBP24.94■■□□□ 1.58
BRD9-201ENST00000466684 POTEAQ6S8J7 498 aa24.93■■□□□ 1.58
BRD9-201ENST00000466684 CADPS2Q86UW7 1296 aa24.9■■□□□ 1.58
BRD9-201ENST00000466684 C19orf44Q9H6X5 657 aa24.9■■□□□ 1.58
BRD9-201ENST00000466684 TRPM2O94759 1503 aa24.9■■□□□ 1.58
BRD9-201ENST00000466684 ITGAEP38570 1179 aa24.89■■□□□ 1.58
BRD9-201ENST00000466684 ATF3P18847 181 aa24.87■■□□□ 1.57
BRD9-201ENST00000466684 COL16A1Q07092 1604 aaPredicted RBP24.87■■□□□ 1.57
BRD9-201ENST00000466684 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.87■■□□□ 1.57
BRD9-201ENST00000466684 AMOTL2Q9Y2J4 779 aa24.85■■□□□ 1.57
BRD9-201ENST00000466684 SPATA31A6Q5VVP1 1343 aa24.83■■□□□ 1.57
BRD9-201ENST00000466684 AHDC1Q5TGY3 1603 aaPredicted RBP24.82■■□□□ 1.56
BRD9-201ENST00000466684 SPHKAPQ2M3C7 1700 aa24.81■■□□□ 1.56
BRD9-201ENST00000466684 PTPRUQ92729 1446 aa24.81■■□□□ 1.56
BRD9-201ENST00000466684 SETBP1Q9Y6X0 1596 aa24.79■■□□□ 1.56
BRD9-201ENST00000466684 DCCP43146 1447 aa24.79■■□□□ 1.56
BRD9-201ENST00000466684 ZNF326Q5BKZ1 582 aaKnown RBP24.78■■□□□ 1.56
BRD9-201ENST00000466684 NRXN3Q9Y4C0 1643 aa24.77■■□□□ 1.56
BRD9-201ENST00000466684 MEX3CQ5U5Q3 659 aaKnown RBP24.77■■□□□ 1.56
BRD9-201ENST00000466684 XRN1Q8IZH2 1706 aaKnown RBP24.76■■□□□ 1.55
BRD9-201ENST00000466684 PPARGC1BQ86YN6 1023 aaKnown RBP24.76■■□□□ 1.55
BRD9-201ENST00000466684 SHPRHQ149N8 1683 aa24.76■■□□□ 1.55
BRD9-201ENST00000466684 LRP6O75581 1613 aa24.75■■□□□ 1.55
BRD9-201ENST00000466684 BRINP3Q76B58 766 aa24.75■■□□□ 1.55
BRD9-201ENST00000466684 ZNF772Q68DY9 489 aaPredicted RBP24.73■■□□□ 1.55
BRD9-201ENST00000466684 SETD1AO15047 1707 aaKnown RBP24.7■■□□□ 1.54
BRD9-201ENST00000466684 METP08581 1390 aa24.7■■□□□ 1.54
BRD9-201ENST00000466684 ASXL1Q8IXJ9 1541 aa24.69■■□□□ 1.54
BRD9-201ENST00000466684 CLTCL1P53675 1640 aa24.68■■□□□ 1.54
BRD9-201ENST00000466684 NEXMIFQ5QGS0 1516 aa24.68■■□□□ 1.54
BRD9-201ENST00000466684 MST1RQ04912 1400 aa24.67■■□□□ 1.54
BRD9-201ENST00000466684 SETD5Q9C0A6 1442 aa24.65■■□□□ 1.54
BRD9-201ENST00000466684 ADGRL3Q9HAR2 1447 aa24.65■■□□□ 1.54
BRD9-201ENST00000466684 RRBP1Q9P2E9 1410 aaKnown RBP24.65■■□□□ 1.54
BRD9-201ENST00000466684 KIF1BO60333 1816 aa24.65■■□□□ 1.54
BRD9-201ENST00000466684 NHSL1Q5SYE7 1610 aa24.63■■□□□ 1.53
BRD9-201ENST00000466684 NAIPQ13075 1403 aa24.63■■□□□ 1.53
BRD9-201ENST00000466684 NUTM2BA6NNL0 878 aaPredicted RBP24.63■■□□□ 1.53
BRD9-201ENST00000466684 NUTM2EB1AL46 878 aaPredicted RBP24.63■■□□□ 1.53
BRD9-201ENST00000466684 NUTM2AQ8IVF1 878 aaPredicted RBP24.63■■□□□ 1.53
BRD9-201ENST00000466684 LRRC59Q96AG4 307 aaKnown RBP24.62■■□□□ 1.53
BRD9-201ENST00000466684 RXRBP28702 533 aa24.6■■□□□ 1.53
BRD9-201ENST00000466684 TRIM52Q96A61 297 aa24.6■■□□□ 1.53
BRD9-201ENST00000466684 NALCNQ8IZF0 1738 aa24.59■■□□□ 1.53
BRD9-201ENST00000466684 VGFO15240 615 aaPredicted RBP24.59■■□□□ 1.53
BRD9-201ENST00000466684 PTCH1Q13635 1447 aa24.55■■□□□ 1.52
BRD9-201ENST00000466684 AFF2P51816 1311 aa24.55■■□□□ 1.52
BRD9-201ENST00000466684 CDK12Q9NYV4 1490 aaPredicted RBP24.54■■□□□ 1.52
BRD9-201ENST00000466684 RPGRIP1LQ68CZ1 1315 aa24.54■■□□□ 1.52
BRD9-201ENST00000466684 UPF1Q92900 1129 aaKnown RBP eCLIP24.53■■□□□ 1.52
BRD9-201ENST00000466684 HFM1A2PYH4 1435 aa24.53■■□□□ 1.52
BRD9-201ENST00000466684 C1orf167Q5SNV9 1468 aa24.53■■□□□ 1.52
BRD9-201ENST00000466684 PNPLA6Q8IY17 1366 aa24.52■■□□□ 1.52
BRD9-201ENST00000466684 DDX17Q92841 729 aaKnown RBP24.52■■□□□ 1.52
BRD9-201ENST00000466684 SLC4A1APQ9BWU0 796 aaKnown RBP24.51■■□□□ 1.51
BRD9-201ENST00000466684 PRAG1Q86YV5 1406 aa24.5■■□□□ 1.51
BRD9-201ENST00000466684 ROBO2Q9HCK4 1378 aa24.49■■□□□ 1.51
BRD9-201ENST00000466684 C8orf37Q96NL8 207 aa24.49■■□□□ 1.51
BRD9-201ENST00000466684 LAMC1P11047 1609 aa24.48■■□□□ 1.51
BRD9-201ENST00000466684 PPLO60437 1756 aa24.45■■□□□ 1.51
BRD9-201ENST00000466684 QTRT2Q9H974 415 aaKnown RBP24.44■■□□□ 1.5
BRD9-201ENST00000466684 RBM6P78332 1123 aaKnown RBP24.44■■□□□ 1.5
BRD9-201ENST00000466684 ORAI2Q96SN7 254 aa24.44■■□□□ 1.5
BRD9-201ENST00000466684 SOS2Q07890 1332 aaPredicted RBP24.43■■□□□ 1.5
BRD9-201ENST00000466684 NGLY1Q96IV0 654 aa24.42■■□□□ 1.5
BRD9-201ENST00000466684 ADAMTS2O95450 1211 aa24.41■■□□□ 1.5
BRD9-201ENST00000466684 RGS12O14924 1447 aa24.38■■□□□ 1.49
BRD9-201ENST00000466684 CCDC144AA2RUR9 1427 aa24.37■■□□□ 1.49
BRD9-201ENST00000466684 CDC42BPGQ6DT37 1551 aa24.37■■□□□ 1.49
BRD9-201ENST00000466684 FOXD1Q16676 465 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms