RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579	STAG3	Q9UJ98	1225 aa		14.12	□□□□□ -0.15
SDCCAG3-208	ENST00000466579	TXNDC2	Q86VQ3	553 aa		14.11	□□□□□ -0.15
SDCCAG3-208	ENST00000466579	EID1	Q9Y6B2	187 aa		14.1	□□□□□ -0.15
SDCCAG3-208	ENST00000466579	RIMS2	Q9UQ26	1411 aa		14.09	□□□□□ -0.15
SDCCAG3-208	ENST00000466579	KIF1B	O60333	1816 aa		14.09	□□□□□ -0.15
SDCCAG3-208	ENST00000466579	PLEKHG1	Q9ULL1	1385 aa		14.07	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	IQSEC2	Q5JU85	1478 aa		14.06	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	HDGF	P51858	240 aa	Known RBP	14.06	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	14.06	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	14.06	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	NEXMIF	Q5QGS0	1516 aa		14.05	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	CERK	Q8TCT0	537 aa		14.05	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	CPS1	P31327	1500 aa		14.05	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	CHGA	P10645	457 aa	Known RBP	14.04	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	CCDC144A	A2RUR9	1427 aa		14.04	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	SPATA31E1	Q6ZUB1	1445 aa		14.04	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	STRCP1	A6NGW2	1772 aa		14.04	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	DIP2A	Q14689	1571 aa		14.02	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	SETBP1	Q9Y6X0	1596 aa		14.02	□□□□□ -0.16
SDCCAG3-208	ENST00000466579	ANKRD30B	Q9BXX2	1392 aa		14.02	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	TRIM26	Q12899	539 aa	Predicted RBP	14.02	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	NRXN3	Q9Y4C0	1643 aa		14.01	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	ADAMTS13	Q76LX8	1427 aa		14.01	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	RPGRIP1L	Q68CZ1	1315 aa		14.01	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	PPL	O60437	1756 aa		14.01	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	NWD1	Q149M9	1564 aa		14	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	IFT172	Q9UG01	1749 aa		13.99	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	TBX22	Q9Y458	520 aa		13.99	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	CHD2	O14647	1828 aa	Known RBP	13.99	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	PPP1R15A	O75807	674 aa	Predicted RBP	13.98	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	PIK3R4	Q99570	1358 aa		13.97	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	LRRC7	Q96NW7	1537 aa		13.97	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	ZNF326	Q5BKZ1	582 aa	Known RBP	13.97	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	FBXO41	Q8TF61	875 aa		13.97	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	SLC26A8	Q96RN1	970 aa		13.97	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	KCNA6	P17658	529 aa		13.96	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.96	□□□□□ -0.17
SDCCAG3-208	ENST00000466579	NKTR	P30414	1462 aa	Known RBP	13.95	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	VGF	O15240	615 aa	Predicted RBP	13.95	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	SETD1A	O15047	1707 aa	Known RBP	13.95	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	XIRP1	Q702N8	1843 aa	Known RBP	13.94	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	XRN1	Q8IZH2	1706 aa	Known RBP	13.92	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	MYOM2	P54296	1465 aa		13.92	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	NRXN1	Q9ULB1	1477 aa		13.92	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	PTPRU	Q92729	1446 aa		13.91	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	ALK	Q9UM73	1620 aa		13.91	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	ILDR1	Q86SU0	546 aa	Predicted RBP	13.91	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	BCAN	Q96GW7	911 aa		13.91	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	PRAG1	Q86YV5	1406 aa		13.9	□□□□□ -0.18
SDCCAG3-208	ENST00000466579	PIK3C2G	O75747	1445 aa		13.9	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	MET	P08581	1390 aa		13.89	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	RGL3	Q3MIN7	710 aa		13.89	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	NCOA3	Q9Y6Q9	1424 aa		13.89	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	ADGRF5	Q8IZF2	1346 aa		13.89	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	DHX57	Q6P158	1386 aa	Known RBP	13.88	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	TMEM94	Q12767	1356 aa		13.87	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	STAC3	Q96MF2	364 aa		13.87	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	PROSER2	Q86WR7	435 aa	Predicted RBP	13.85	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	AMOTL2	Q9Y2J4	779 aa		13.85	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	LAMC1	P11047	1609 aa		13.85	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	ASXL1	Q8IXJ9	1541 aa		13.84	□□□□□ -0.19
SDCCAG3-208	ENST00000466579	PTCH1	Q13635	1447 aa		13.83	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	UBAP1L	F5GYI3	381 aa		13.83	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	TOM1	O60784	492 aa		13.83	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	C14orf93	Q9H972	538 aa	Known RBP	13.83	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	TECPR2	O15040	1411 aa		13.82	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	KNDC1	Q76NI1	1749 aa		13.81	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	LRPPRC	P42704	1394 aa	Known RBP	13.8	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	ABCC11	Q96J66	1382 aa		13.8	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.79	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	DCAF11	Q8TEB1	546 aa		13.79	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	MSH6	P52701	1360 aa		13.79	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	ROBO2	Q9HCK4	1378 aa		13.79	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	DCC	P43146	1447 aa		13.79	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	ADGRB1	O14514	1584 aa		13.79	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	RBM33	Q96EV2	1170 aa	Known RBP	13.78	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	KIAA1210	Q9ULL0	1709 aa		13.78	□□□□□ -0.2
SDCCAG3-208	ENST00000466579	CFAP70	Q5T0N1	1121 aa		13.77	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	SIRT1	Q96EB6	747 aa		13.77	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.77	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	C19orf44	Q9H6X5	657 aa		13.77	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	NALCN	Q8IZF0	1738 aa		13.76	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	FAM135B	Q49AJ0	1406 aa		13.76	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	ADGRL3	Q9HAR2	1447 aa		13.76	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	SIN3A	Q96ST3	1273 aa		13.76	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	DLC1	Q96QB1	1528 aa		13.74	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	TMEM132E	Q6IEE7	984 aa		13.74	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	L3MBTL2	Q969R5	705 aa		13.74	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	PCGF6	Q9BYE7	350 aa		13.74	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	KDM2A	Q9Y2K7	1162 aa		13.74	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	CADPS2	Q86UW7	1296 aa		13.73	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	SLAIN2	Q9P270	581 aa		13.72	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	ROBO1	Q9Y6N7	1651 aa		13.72	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	PIP4K2B	P78356	416 aa		13.71	□□□□□ -0.21
SDCCAG3-208	ENST00000466579	MST1R	Q04912	1400 aa		13.71	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	CDC42BPG	Q6DT37	1551 aa		13.71	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	ATF3	P18847	181 aa		13.7	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	C14orf37	Q86TY3	774 aa		13.7	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	CLSPN	Q9HAW4	1339 aa		13.69	□□□□□ -0.22
SDCCAG3-208	ENST00000466579	NEUROD1	Q13562	356 aa		13.69	□□□□□ -0.22

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