RNA–Protein interactions for RNA: ENST00000466559.1

REPIN1-204, Transcript of replication initiator 1, humanhuman

TSL 1 (best) BASIC

Gene REPIN1, Length 1,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-204ENST00000466559 SLC26A8Q96RN1 970 aa39.41■■■■□ 3.9
REPIN1-204ENST00000466559 RIMS2Q9UQ26 1411 aa39.4■■■■□ 3.9
REPIN1-204ENST00000466559 ZFYVE9O95405 1425 aa39.39■■■■□ 3.9
REPIN1-204ENST00000466559 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.36■■■■□ 3.89
REPIN1-204ENST00000466559 NAIPQ13075 1403 aa39.35■■■■□ 3.89
REPIN1-204ENST00000466559 KCNA6P17658 529 aa39.35■■■■□ 3.89
REPIN1-204ENST00000466559 PLEKHG1Q9ULL1 1385 aa39.34■■■■□ 3.89
REPIN1-204ENST00000466559 HSPA1LP34931 641 aa39.32■■■■□ 3.89
REPIN1-204ENST00000466559 SENP3Q9H4L4 574 aaPredicted RBP39.3■■■■□ 3.88
REPIN1-204ENST00000466559 ALKQ9UM73 1620 aa39.29■■■■□ 3.88
REPIN1-204ENST00000466559 SPHKAPQ2M3C7 1700 aa39.28■■■■□ 3.88
REPIN1-204ENST00000466559 PROSER2Q86WR7 435 aaPredicted RBP39.26■■■■□ 3.88
REPIN1-204ENST00000466559 HFM1A2PYH4 1435 aa39.25■■■■□ 3.87
REPIN1-204ENST00000466559 XIRP1Q702N8 1843 aaKnown RBP39.25■■■■□ 3.87
REPIN1-204ENST00000466559 TMEM94Q12767 1356 aa39.24■■■■□ 3.87
REPIN1-204ENST00000466559 NKTRP30414 1462 aaKnown RBP39.24■■■■□ 3.87
REPIN1-204ENST00000466559 TRIM52Q96A61 297 aa39.22■■■■□ 3.87
REPIN1-204ENST00000466559 NWD1Q149M9 1564 aa39.21■■■■□ 3.87
REPIN1-204ENST00000466559 NUTM2DQ5VT03 806 aaPredicted RBP39.21■■■■□ 3.87
REPIN1-204ENST00000466559 TBX22Q9Y458 520 aa39.19■■■■□ 3.86
REPIN1-204ENST00000466559 ZNF326Q5BKZ1 582 aaKnown RBP39.14■■■■□ 3.86
REPIN1-204ENST00000466559 CHD2O14647 1828 aaKnown RBP39.14■■■■□ 3.86
REPIN1-204ENST00000466559 DIP2AQ14689 1571 aa39.13■■■■□ 3.85
REPIN1-204ENST00000466559 TRPM2O94759 1503 aa39.1■■■■□ 3.85
REPIN1-204ENST00000466559 RBM33Q96EV2 1170 aaKnown RBP39.1■■■■□ 3.85
REPIN1-204ENST00000466559 ADAMTS13Q76LX8 1427 aa39.09■■■■□ 3.85
REPIN1-204ENST00000466559 MSH6P52701 1360 aa39.08■■■■□ 3.85
REPIN1-204ENST00000466559 SLC4A1APQ9BWU0 796 aaKnown RBP39.07■■■■□ 3.85
REPIN1-204ENST00000466559 PIK3R4Q99570 1358 aa39.07■■■■□ 3.84
REPIN1-204ENST00000466559 CLTCL1P53675 1640 aa39.06■■■■□ 3.84
REPIN1-204ENST00000466559 ILDR2Q71H61 639 aa39.02■■■■□ 3.84
REPIN1-204ENST00000466559 KIF1BO60333 1816 aa39.02■■■■□ 3.84
REPIN1-204ENST00000466559 FAM135BQ49AJ0 1406 aa39.01■■■■□ 3.84
REPIN1-204ENST00000466559 MED1Q15648 1581 aaPredicted RBP38.98■■■■□ 3.83
REPIN1-204ENST00000466559 C14orf37Q86TY3 774 aa38.97■■■■□ 3.83
REPIN1-204ENST00000466559 NCOA3Q9Y6Q9 1424 aa38.96■■■■□ 3.83
REPIN1-204ENST00000466559 SETBP1Q9Y6X0 1596 aa38.94■■■■□ 3.82
REPIN1-204ENST00000466559 AMOTL2Q9Y2J4 779 aa38.92■■■■□ 3.82
REPIN1-204ENST00000466559 NEXMIFQ5QGS0 1516 aa38.91■■■■□ 3.82
REPIN1-204ENST00000466559 ROBO1Q9Y6N7 1651 aa38.9■■■■□ 3.82
REPIN1-204ENST00000466559 NRXN3Q9Y4C0 1643 aa38.89■■■■□ 3.82
REPIN1-204ENST00000466559 SLAIN2Q9P270 581 aa38.88■■■■□ 3.81
REPIN1-204ENST00000466559 PHF23Q9BUL5 403 aaPredicted RBP38.85■■■■□ 3.81
REPIN1-204ENST00000466559 PTPRUQ92729 1446 aa38.85■■■■□ 3.81
REPIN1-204ENST00000466559 ACIN1Q9UKV3 1341 aaKnown RBP38.83■■■■□ 3.81
REPIN1-204ENST00000466559 VGFO15240 615 aaPredicted RBP38.82■■■■□ 3.8
REPIN1-204ENST00000466559 C19orf44Q9H6X5 657 aa38.82■■■■□ 3.8
REPIN1-204ENST00000466559 ATF3P18847 181 aa38.81■■■■□ 3.8
REPIN1-204ENST00000466559 CADPS2Q86UW7 1296 aa38.81■■■■□ 3.8
REPIN1-204ENST00000466559 RPGRIP1LQ68CZ1 1315 aa38.81■■■■□ 3.8
REPIN1-204ENST00000466559 FOXD1Q16676 465 aa38.8■■■■□ 3.8
REPIN1-204ENST00000466559 XRN1Q8IZH2 1706 aaKnown RBP38.78■■■■□ 3.8
REPIN1-204ENST00000466559 SOCS7O14512 581 aa38.78■■■■□ 3.8
REPIN1-204ENST00000466559 MPHOSPH9Q99550 1183 aa38.78■■■■□ 3.8
REPIN1-204ENST00000466559 METP08581 1390 aa38.78■■■■□ 3.8
REPIN1-204ENST00000466559 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.77■■■■□ 3.8
REPIN1-204ENST00000466559 CCDC144AA2RUR9 1427 aa38.76■■■■□ 3.8
REPIN1-204ENST00000466559 SETD5Q9C0A6 1442 aa38.73■■■■□ 3.79
REPIN1-204ENST00000466559 PHLPP1O60346 1717 aa38.69■■■■□ 3.78
REPIN1-204ENST00000466559 PPLO60437 1756 aa38.67■■■■□ 3.78
REPIN1-204ENST00000466559 DCCP43146 1447 aa38.67■■■■□ 3.78
REPIN1-204ENST00000466559 RGL3Q3MIN7 710 aa38.6■■■■□ 3.77
REPIN1-204ENST00000466559 SETD1AO15047 1707 aaKnown RBP38.58■■■■□ 3.77
REPIN1-204ENST00000466559 JCADQ9P266 1359 aa38.57■■■■□ 3.77
REPIN1-204ENST00000466559 ADGRL3Q9HAR2 1447 aa38.57■■■■□ 3.77
REPIN1-204ENST00000466559 RAB3GAP2Q9H2M9 1393 aa38.57■■■■□ 3.76
REPIN1-204ENST00000466559 SPATA31E1Q6ZUB1 1445 aa38.55■■■■□ 3.76
REPIN1-204ENST00000466559 PTCH1Q13635 1447 aa38.55■■■■□ 3.76
REPIN1-204ENST00000466559 ANKRD30BQ9BXX2 1392 aa38.54■■■■□ 3.76
REPIN1-204ENST00000466559 COL16A1Q07092 1604 aaPredicted RBP38.53■■■■□ 3.76
REPIN1-204ENST00000466559 AHDC1Q5TGY3 1603 aaPredicted RBP38.52■■■■□ 3.76
REPIN1-204ENST00000466559 BRINP3Q76B58 766 aa38.51■■■■□ 3.76
REPIN1-204ENST00000466559 NALCNQ8IZF0 1738 aa38.49■■■■□ 3.75
REPIN1-204ENST00000466559 MST1RQ04912 1400 aa38.49■■■■□ 3.75
REPIN1-204ENST00000466559 ADGRF5Q8IZF2 1346 aa38.49■■■■□ 3.75
REPIN1-204ENST00000466559 ROBO2Q9HCK4 1378 aa38.47■■■■□ 3.75
REPIN1-204ENST00000466559 PRAG1Q86YV5 1406 aa38.46■■■■□ 3.75
REPIN1-204ENST00000466559 IFT172Q9UG01 1749 aa38.46■■■■□ 3.75
REPIN1-204ENST00000466559 ASXL1Q8IXJ9 1541 aa38.44■■■■□ 3.74
REPIN1-204ENST00000466559 SPATA31A6Q5VVP1 1343 aa38.39■■■■□ 3.74
REPIN1-204ENST00000466559 RGS17Q9UGC6 210 aaPredicted RBP38.39■■■■□ 3.74
REPIN1-204ENST00000466559 PIK3C2GO75747 1445 aa38.36■■■■□ 3.73
REPIN1-204ENST00000466559 SHPRHQ149N8 1683 aa38.35■■■■□ 3.73
REPIN1-204ENST00000466559 STK26Q9P289 416 aa38.34■■■■□ 3.73
REPIN1-204ENST00000466559 NHSL1Q5SYE7 1610 aa38.33■■■■□ 3.73
REPIN1-204ENST00000466559 C1orf167Q5SNV9 1468 aa38.33■■■■□ 3.73
REPIN1-204ENST00000466559 HRCP23327 699 aa38.32■■■■□ 3.72
REPIN1-204ENST00000466559 MEX3CQ5U5Q3 659 aaKnown RBP38.31■■■■□ 3.72
REPIN1-204ENST00000466559 LRPPRCP42704 1394 aaKnown RBP38.31■■■■□ 3.72
REPIN1-204ENST00000466559 TMEM132EQ6IEE7 984 aa38.28■■■■□ 3.72
REPIN1-204ENST00000466559 LRRC59Q96AG4 307 aaKnown RBP38.28■■■■□ 3.72
REPIN1-204ENST00000466559 TECPR2O15040 1411 aa38.28■■■■□ 3.72
REPIN1-204ENST00000466559 MYOM2P54296 1465 aa38.27■■■■□ 3.72
REPIN1-204ENST00000466559 ABCC11Q96J66 1382 aa38.25■■■■□ 3.71
REPIN1-204ENST00000466559 KNDC1Q76NI1 1749 aa38.24■■■■□ 3.71
REPIN1-204ENST00000466559 LRP6O75581 1613 aa38.23■■■■□ 3.71
REPIN1-204ENST00000466559 POTEAQ6S8J7 498 aa38.23■■■■□ 3.71
REPIN1-204ENST00000466559 DDX17Q92841 729 aaKnown RBP38.22■■■■□ 3.71
REPIN1-204ENST00000466559 C14orf93Q9H972 538 aaKnown RBP38.22■■■■□ 3.71
REPIN1-204ENST00000466559 CDC42BPGQ6DT37 1551 aa38.22■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms