RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 MROH1Q8NDA8 1641 aa13.21□□□□□ -0.3
APP-214ENST00000466453 SLC26A8Q96RN1 970 aa13.2□□□□□ -0.3
APP-214ENST00000466453 UNC13BO14795 1591 aa13.2□□□□□ -0.3
APP-214ENST00000466453 CHD2O14647 1828 aaKnown RBP13.19□□□□□ -0.3
APP-214ENST00000466453 BRINP3Q76B58 766 aa13.19□□□□□ -0.3
APP-214ENST00000466453 USP21Q9UK80 565 aa13.19□□□□□ -0.3
APP-214ENST00000466453 PNPLA6Q8IY17 1366 aa13.19□□□□□ -0.3
APP-214ENST00000466453 C1QTNF8P60827 252 aa13.18□□□□□ -0.3
APP-214ENST00000466453 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
APP-214ENST00000466453 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
APP-214ENST00000466453 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
APP-214ENST00000466453 CHIC1Q5VXU3 224 aa13.16□□□□□ -0.3
APP-214ENST00000466453 ZNF784Q8NCA9 323 aaPredicted RBP13.16□□□□□ -0.3
APP-214ENST00000466453 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
APP-214ENST00000466453 PIK3C2BO00750 1634 aa13.16□□□□□ -0.3
APP-214ENST00000466453 CCDC18Q5T9S5 1454 aa13.16□□□□□ -0.3
APP-214ENST00000466453 MBD5Q9P267 1494 aa13.16□□□□□ -0.3
APP-214ENST00000466453 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
APP-214ENST00000466453 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
APP-214ENST00000466453 SPHKAPQ2M3C7 1700 aa13.15□□□□□ -0.3
APP-214ENST00000466453 ARHGAP35Q9NRY4 1499 aa13.15□□□□□ -0.3
APP-214ENST00000466453 ADAMTS2O95450 1211 aa13.14□□□□□ -0.31
APP-214ENST00000466453 CFDP1Q9UEE9 299 aaPredicted RBP13.14□□□□□ -0.31
APP-214ENST00000466453 ATF3P18847 181 aa13.13□□□□□ -0.31
APP-214ENST00000466453 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
APP-214ENST00000466453 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
APP-214ENST00000466453 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
APP-214ENST00000466453 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
APP-214ENST00000466453 PTCH1Q13635 1447 aa13.11□□□□□ -0.31
APP-214ENST00000466453 CEP152O94986 1710 aa13.1□□□□□ -0.31
APP-214ENST00000466453 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
APP-214ENST00000466453 DCCP43146 1447 aa13.07□□□□□ -0.32
APP-214ENST00000466453 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
APP-214ENST00000466453 GJD4Q96KN9 370 aaPredicted RBP13.07□□□□□ -0.32
APP-214ENST00000466453 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
APP-214ENST00000466453 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.05□□□□□ -0.32
APP-214ENST00000466453 BAG6P46379 1132 aa13.05□□□□□ -0.32
APP-214ENST00000466453 GLI3P10071 1580 aa13.05□□□□□ -0.32
APP-214ENST00000466453 ZNF644Q9H582 1327 aaPredicted RBP13.05□□□□□ -0.32
APP-214ENST00000466453 CCNB3Q8WWL7 1395 aa13.05□□□□□ -0.32
APP-214ENST00000466453 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
APP-214ENST00000466453 STAG3Q9UJ98 1225 aa13.04□□□□□ -0.32
APP-214ENST00000466453 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
APP-214ENST00000466453 MST1RQ04912 1400 aa13.04□□□□□ -0.32
APP-214ENST00000466453 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
APP-214ENST00000466453 EIF2AK4Q9P2K8 1649 aaKnown RBP13.03□□□□□ -0.32
APP-214ENST00000466453 CAMTA1Q9Y6Y1 1673 aa13.03□□□□□ -0.32
APP-214ENST00000466453 CHD4Q14839 1912 aa13.02□□□□□ -0.32
APP-214ENST00000466453 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.33
APP-214ENST00000466453 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.33
APP-214ENST00000466453 DDX17Q92841 729 aaKnown RBP13.01□□□□□ -0.33
APP-214ENST00000466453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.332e-7■□□□□ 9.9
APP-214ENST00000466453 LAMC1P11047 1609 aa13.01□□□□□ -0.33
APP-214ENST00000466453 COL22A1Q8NFW1 1626 aaPredicted RBP13.01□□□□□ -0.33
APP-214ENST00000466453 ADGRB3O60242 1522 aa13□□□□□ -0.33
APP-214ENST00000466453 PLEKHG1Q9ULL1 1385 aa13□□□□□ -0.33
APP-214ENST00000466453 SLC34A2O95436 690 aa13□□□□□ -0.33
APP-214ENST00000466453 BCANQ96GW7 911 aa13□□□□□ -0.33
APP-214ENST00000466453 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
APP-214ENST00000466453 EEA1Q15075 1411 aa12.98□□□□□ -0.33
APP-214ENST00000466453 MYOM2P54296 1465 aa12.97□□□□□ -0.33
APP-214ENST00000466453 RGPD1P0DJD0 1748 aa12.97□□□□□ -0.33
APP-214ENST00000466453 DISP2A7MBM2 1401 aa12.96□□□□□ -0.33
APP-214ENST00000466453 PPP1R15AO75807 674 aaPredicted RBP12.96□□□□□ -0.33
APP-214ENST00000466453 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
APP-214ENST00000466453 IDI1Q13907 227 aa12.96□□□□□ -0.33
APP-214ENST00000466453 TBX22Q9Y458 520 aa12.96□□□□□ -0.33
APP-214ENST00000466453 ZFYVE9O95405 1425 aa12.96□□□□□ -0.34
APP-214ENST00000466453 PIK3R4Q99570 1358 aa12.95□□□□□ -0.34
APP-214ENST00000466453 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
APP-214ENST00000466453 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
APP-214ENST00000466453 TRPM2O94759 1503 aa12.93□□□□□ -0.34
APP-214ENST00000466453 SOS2Q07890 1332 aaPredicted RBP12.93□□□□□ -0.34
APP-214ENST00000466453 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
APP-214ENST00000466453 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
APP-214ENST00000466453 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
APP-214ENST00000466453 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
APP-214ENST00000466453 GOLGB1Q14789 3259 aaKnown RBP12.92□□□□□ -0.34
APP-214ENST00000466453 GIGYF1O75420 1035 aaPredicted RBP12.92□□□□□ -0.34
APP-214ENST00000466453 ADAMTS13Q76LX8 1427 aa12.92□□□□□ -0.34
APP-214ENST00000466453 EHBP1L1Q8N3D4 1523 aa12.92□□□□□ -0.34
APP-214ENST00000466453 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
APP-214ENST00000466453 SLIT2O94813 1529 aa12.91□□□□□ -0.34
APP-214ENST00000466453 ARHGEF5Q12774 1597 aa12.9□□□□□ -0.34
APP-214ENST00000466453 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
APP-214ENST00000466453 MYO5BQ9ULV0 1848 aa12.9□□□□□ -0.34
APP-214ENST00000466453 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
APP-214ENST00000466453 SPON1Q9HCB6 807 aa12.89□□□□□ -0.35
APP-214ENST00000466453 XRN1Q8IZH2 1706 aaKnown RBP12.88□□□□□ -0.35
APP-214ENST00000466453 RIMS2Q9UQ26 1411 aa12.88□□□□□ -0.35
APP-214ENST00000466453 RPRD2Q5VT52 1461 aaKnown RBP12.87□□□□□ -0.35
APP-214ENST00000466453 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
APP-214ENST00000466453 PTPRUQ92729 1446 aa12.87□□□□□ -0.35
APP-214ENST00000466453 NOS1P29475 1434 aa12.86□□□□□ -0.35
APP-214ENST00000466453 ADGRL3Q9HAR2 1447 aa12.86□□□□□ -0.35
APP-214ENST00000466453 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
APP-214ENST00000466453 TSPY4P0CV99 314 aa12.85□□□□□ -0.35
APP-214ENST00000466453 TSPY10P0CW01 314 aa12.85□□□□□ -0.35
APP-214ENST00000466453 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
APP-214ENST00000466453 AMOTL2Q9Y2J4 779 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms