RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 ARHGAP23Q9P227 1491 aa14.57□□□□□ -0.08
RTFDC1-205ENST00000466260 ILDR1Q86SU0 546 aaPredicted RBP14.56□□□□□ -0.08
RTFDC1-205ENST00000466260 TXNDC2Q86VQ3 553 aa14.56□□□□□ -0.08
RTFDC1-205ENST00000466260 CERKQ8TCT0 537 aa14.56□□□□□ -0.08
RTFDC1-205ENST00000466260 STRCP1A6NGW2 1772 aa14.55□□□□□ -0.08
RTFDC1-205ENST00000466260 SLC52A1Q9NWF4 448 aa14.55□□□□□ -0.08
RTFDC1-205ENST00000466260 TMEM2Q9UHN6 1383 aa14.55□□□□□ -0.08
RTFDC1-205ENST00000466260 MED14O60244 1454 aa14.55□□□□□ -0.08
RTFDC1-205ENST00000466260 LTKP29376 864 aa14.54□□□□□ -0.08
RTFDC1-205ENST00000466260 EID1Q9Y6B2 187 aa14.54□□□□□ -0.08
RTFDC1-205ENST00000466260 TRPM2O94759 1503 aa14.53□□□□□ -0.08
RTFDC1-205ENST00000466260 SETD5Q9C0A6 1442 aa14.53□□□□□ -0.08
RTFDC1-205ENST00000466260 NUTM2DQ5VT03 806 aaPredicted RBP14.52□□□□□ -0.09
RTFDC1-205ENST00000466260 BCANQ96GW7 911 aa14.52□□□□□ -0.09
RTFDC1-205ENST00000466260 RIMS2Q9UQ26 1411 aa14.51□□□□□ -0.09
RTFDC1-205ENST00000466260 RAB3GAP2Q9H2M9 1393 aa14.5□□□□□ -0.09
RTFDC1-205ENST00000466260 PPP1R15AO75807 674 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-205ENST00000466260 FBXO41Q8TF61 875 aa14.49□□□□□ -0.09
RTFDC1-205ENST00000466260 ZNF326Q5BKZ1 582 aaKnown RBP14.48□□□□□ -0.09
RTFDC1-205ENST00000466260 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
RTFDC1-205ENST00000466260 CPS1P31327 1500 aa14.47□□□□□ -0.09
RTFDC1-205ENST00000466260 SLC26A8Q96RN1 970 aa14.47□□□□□ -0.09
RTFDC1-205ENST00000466260 MPHOSPH9Q99550 1183 aa14.46□□□□□ -0.09
RTFDC1-205ENST00000466260 XIRP1Q702N8 1843 aaKnown RBP14.45□□□□□ -0.1
RTFDC1-205ENST00000466260 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
RTFDC1-205ENST00000466260 NEXMIFQ5QGS0 1516 aa14.43□□□□□ -0.1
RTFDC1-205ENST00000466260 PLEKHG1Q9ULL1 1385 aa14.43□□□□□ -0.1
RTFDC1-205ENST00000466260 IQSEC2Q5JU85 1478 aa14.43□□□□□ -0.1
RTFDC1-205ENST00000466260 CHD2O14647 1828 aaKnown RBP14.43□□□□□ -0.1
RTFDC1-205ENST00000466260 PPLO60437 1756 aa14.42□□□□□ -0.1
RTFDC1-205ENST00000466260 HDGFP51858 240 aaKnown RBP14.42□□□□□ -0.1
RTFDC1-205ENST00000466260 CCDC144AA2RUR9 1427 aa14.41□□□□□ -0.1
RTFDC1-205ENST00000466260 NRXN3Q9Y4C0 1643 aa14.41□□□□□ -0.1
RTFDC1-205ENST00000466260 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.41□□□□□ -0.1
RTFDC1-205ENST00000466260 LRRC7Q96NW7 1537 aa14.41□□□□□ -0.1
RTFDC1-205ENST00000466260 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
RTFDC1-205ENST00000466260 DIP2AQ14689 1571 aa14.39□□□□□ -0.11
RTFDC1-205ENST00000466260 NWD1Q149M9 1564 aa14.39□□□□□ -0.11
RTFDC1-205ENST00000466260 IFT172Q9UG01 1749 aa14.39□□□□□ -0.11
RTFDC1-205ENST00000466260 RBM33Q96EV2 1170 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-205ENST00000466260 RGL3Q3MIN7 710 aa14.37□□□□□ -0.11
RTFDC1-205ENST00000466260 ADAMTS13Q76LX8 1427 aa14.37□□□□□ -0.11
RTFDC1-205ENST00000466260 SETBP1Q9Y6X0 1596 aa14.36□□□□□ -0.11
RTFDC1-205ENST00000466260 PIP4K2BP78356 416 aa14.35□□□□□ -0.11
RTFDC1-205ENST00000466260 ACIN1Q9UKV3 1341 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-205ENST00000466260 KCNA6P17658 529 aa14.34□□□□□ -0.11
RTFDC1-205ENST00000466260 SETD1AO15047 1707 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-205ENST00000466260 NKTRP30414 1462 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-205ENST00000466260 PROSER2Q86WR7 435 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-205ENST00000466260 TMEM94Q12767 1356 aa14.33□□□□□ -0.12
RTFDC1-205ENST00000466260 ALKQ9UM73 1620 aa14.32□□□□□ -0.12
RTFDC1-205ENST00000466260 XRN1Q8IZH2 1706 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-205ENST00000466260 TBX22Q9Y458 520 aa14.31□□□□□ -0.12
RTFDC1-205ENST00000466260 SPATA31E1Q6ZUB1 1445 aa14.31□□□□□ -0.12
RTFDC1-205ENST00000466260 PTPRUQ92729 1446 aa14.31□□□□□ -0.12
RTFDC1-205ENST00000466260 ZBTB22O15209 634 aa14.3□□□□□ -0.12
RTFDC1-205ENST00000466260 TOM1O60784 492 aa14.3□□□□□ -0.12
RTFDC1-205ENST00000466260 VGFO15240 615 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-205ENST00000466260 C14orf37Q86TY3 774 aa14.29□□□□□ -0.12
RTFDC1-205ENST00000466260 METP08581 1390 aa14.28□□□□□ -0.12
RTFDC1-205ENST00000466260 AMOTL2Q9Y2J4 779 aa14.28□□□□□ -0.12
RTFDC1-205ENST00000466260 ANKRD30BQ9BXX2 1392 aa14.27□□□□□ -0.12
RTFDC1-205ENST00000466260 RPGRIP1LQ68CZ1 1315 aa14.27□□□□□ -0.12
RTFDC1-205ENST00000466260 ADGRF5Q8IZF2 1346 aa14.27□□□□□ -0.12
RTFDC1-205ENST00000466260 HRCP23327 699 aa14.27□□□□□ -0.13
RTFDC1-205ENST00000466260 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.13
RTFDC1-205ENST00000466260 PIK3R4Q99570 1358 aa14.26□□□□□ -0.13
RTFDC1-205ENST00000466260 NALCNQ8IZF0 1738 aa14.26□□□□□ -0.13
RTFDC1-205ENST00000466260 MSH6P52701 1360 aa14.25□□□□□ -0.13
RTFDC1-205ENST00000466260 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
RTFDC1-205ENST00000466260 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
RTFDC1-205ENST00000466260 ROBO1Q9Y6N7 1651 aa14.25□□□□□ -0.13
RTFDC1-205ENST00000466260 TRIM26Q12899 539 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-205ENST00000466260 LAMC1P11047 1609 aa14.23□□□□□ -0.13
RTFDC1-205ENST00000466260 ASXL1Q8IXJ9 1541 aa14.22□□□□□ -0.13
RTFDC1-205ENST00000466260 SLC4A2P04920 1241 aa14.22□□□□□ -0.13
RTFDC1-205ENST00000466260 KDM2AQ9Y2K7 1162 aa14.22□□□□□ -0.13
RTFDC1-205ENST00000466260 MYOM2P54296 1465 aa14.21□□□□□ -0.13
RTFDC1-205ENST00000466260 HSPA1LP34931 641 aa14.21□□□□□ -0.13
RTFDC1-205ENST00000466260 PIK3C2GO75747 1445 aa14.21□□□□□ -0.13
RTFDC1-205ENST00000466260 KNDC1Q76NI1 1749 aa14.21□□□□□ -0.14
RTFDC1-205ENST00000466260 STK26Q9P289 416 aa14.2□□□□□ -0.14
RTFDC1-205ENST00000466260 TMEM132EQ6IEE7 984 aa14.19□□□□□ -0.14
RTFDC1-205ENST00000466260 PHLPP1O60346 1717 aa14.18□□□□□ -0.14
RTFDC1-205ENST00000466260 DCAF11Q8TEB1 546 aa14.18□□□□□ -0.14
RTFDC1-205ENST00000466260 CFAP70Q5T0N1 1121 aa14.17□□□□□ -0.14
RTFDC1-205ENST00000466260 ROBO2Q9HCK4 1378 aa14.17□□□□□ -0.14
RTFDC1-205ENST00000466260 PTCH1Q13635 1447 aa14.16□□□□□ -0.14
RTFDC1-205ENST00000466260 ATF3P18847 181 aa14.16□□□□□ -0.14
RTFDC1-205ENST00000466260 NRXN1Q9ULB1 1477 aa14.16□□□□□ -0.14
RTFDC1-205ENST00000466260 ADGRL3Q9HAR2 1447 aa14.15□□□□□ -0.14
RTFDC1-205ENST00000466260 NCOA3Q9Y6Q9 1424 aa14.15□□□□□ -0.14
RTFDC1-205ENST00000466260 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
RTFDC1-205ENST00000466260 C19orf44Q9H6X5 657 aa14.15□□□□□ -0.14
RTFDC1-205ENST00000466260 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
RTFDC1-205ENST00000466260 SIN3AQ96ST3 1273 aa14.14□□□□□ -0.15
RTFDC1-205ENST00000466260 YTHDC2Q9H6S0 1430 aaKnown RBP14.14□□□□□ -0.15
RTFDC1-205ENST00000466260 CADPS2Q86UW7 1296 aa14.13□□□□□ -0.15
RTFDC1-205ENST00000466260 SLAIN2Q9P270 581 aa14.13□□□□□ -0.15
RTFDC1-205ENST00000466260 LRPPRCP42704 1394 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms